BLASTX nr result
ID: Cnidium21_contig00004104
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00004104 (476 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cu... 140 2e-52 ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus ... 137 5e-52 ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 140 1e-51 ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vi... 137 2e-51 emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera] 137 2e-51 >ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cucumis sativus] Length = 617 Score = 140 bits (354), Expect(2) = 2e-52 Identities = 62/72 (86%), Positives = 70/72 (97%) Frame = +2 Query: 2 ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181 +LQMGLRL+APGGMQIR+LHRWILKCHACY VT EIGRIFCPKCGNGGTLRKVAVTVGEN Sbjct: 451 LLQMGLRLLAPGGMQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGEN 510 Query: 182 GIVIAARRPRVS 217 G+V+AAR+PR++ Sbjct: 511 GVVLAARKPRIT 522 Score = 90.1 bits (222), Expect(2) = 2e-52 Identities = 44/57 (77%), Positives = 48/57 (84%), Gaps = 1/57 (1%) Frame = +3 Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476 GTKFSLP+PQGGRDAITKN VLREDQLPQKFL+PKTKKK NK D+ FA + F HH Sbjct: 525 GTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHH 581 >ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus communis] gi|223549677|gb|EEF51165.1| RNA-binding protein nob1, putative [Ricinus communis] Length = 628 Score = 137 bits (345), Expect(2) = 5e-52 Identities = 62/72 (86%), Positives = 68/72 (94%) Frame = +2 Query: 2 ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181 +LQMGLRL+APGGMQIR+LHRWILKCHACY VT EIGRIFCPKCGNGGTLRKVA+TVGEN Sbjct: 464 LLQMGLRLLAPGGMQIRQLHRWILKCHACYTVTAEIGRIFCPKCGNGGTLRKVAITVGEN 523 Query: 182 GIVIAARRPRVS 217 GIV+A RPR+S Sbjct: 524 GIVLADCRPRIS 535 Score = 92.4 bits (228), Expect(2) = 5e-52 Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%) Frame = +3 Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476 GTKFSLP+PQGGRDAITKN +LREDQLPQK LYPKTKKK NK DD FA + IF HH Sbjct: 538 GTKFSLPLPQGGRDAITKNLILREDQLPQKLLYPKTKKKVNKQGDDFFAVDDIFSHH 594 >ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein NOB1-like [Cucumis sativus] Length = 617 Score = 140 bits (354), Expect(2) = 1e-51 Identities = 62/72 (86%), Positives = 70/72 (97%) Frame = +2 Query: 2 ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181 +LQMGLRL+APGGMQIR+LHRWILKCHACY VT EIGRIFCPKCGNGGTLRKVAVTVGEN Sbjct: 451 LLQMGLRLLAPGGMQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGEN 510 Query: 182 GIVIAARRPRVS 217 G+V+AAR+PR++ Sbjct: 511 GVVLAARKPRIT 522 Score = 87.8 bits (216), Expect(2) = 1e-51 Identities = 43/57 (75%), Positives = 47/57 (82%), Gaps = 1/57 (1%) Frame = +3 Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476 GTKFSLP+PQGGRDAITKN VLREDQLPQKFL+P TKKK NK D+ FA + F HH Sbjct: 525 GTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPXTKKKVNKQGDEFFAVDDFFSHH 581 >ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vitis vinifera] Length = 633 Score = 137 bits (346), Expect(2) = 2e-51 Identities = 61/72 (84%), Positives = 70/72 (97%) Frame = +2 Query: 2 ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181 +LQMGLRL+APGGMQIR+LHRWILKCHAC +VT EIGRIFCP+CGNGGTLRKVAVTVGEN Sbjct: 469 LLQMGLRLLAPGGMQIRQLHRWILKCHACNEVTAEIGRIFCPRCGNGGTLRKVAVTVGEN 528 Query: 182 GIVIAARRPRVS 217 GI++AAR+PR+S Sbjct: 529 GIILAARKPRIS 540 Score = 89.7 bits (221), Expect(2) = 2e-51 Identities = 42/57 (73%), Positives = 48/57 (84%), Gaps = 1/57 (1%) Frame = +3 Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476 GTKFSLP+P+GGRDAITKNP+LREDQLP K L+PKTKKK NK D+ FAS+ F HH Sbjct: 543 GTKFSLPLPRGGRDAITKNPILREDQLPHKLLHPKTKKKANKPGDEFFASDDFFSHH 599 >emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera] Length = 621 Score = 137 bits (346), Expect(2) = 2e-51 Identities = 61/72 (84%), Positives = 70/72 (97%) Frame = +2 Query: 2 ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181 +LQMGLRL+APGGMQIR+LHRWILKCHAC +VT EIGRIFCP+CGNGGTLRKVAVTVGEN Sbjct: 457 LLQMGLRLLAPGGMQIRQLHRWILKCHACNEVTAEIGRIFCPRCGNGGTLRKVAVTVGEN 516 Query: 182 GIVIAARRPRVS 217 GI++AAR+PR+S Sbjct: 517 GIILAARKPRIS 528 Score = 89.7 bits (221), Expect(2) = 2e-51 Identities = 42/57 (73%), Positives = 48/57 (84%), Gaps = 1/57 (1%) Frame = +3 Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476 GTKFSLP+P+GGRDAITKNP+LREDQLP K L+PKTKKK NK D+ FAS+ F HH Sbjct: 531 GTKFSLPLPRGGRDAITKNPILREDQLPHKLLHPKTKKKANKPGDEFFASDDFFSHH 587