BLASTX nr result

ID: Cnidium21_contig00004104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004104
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cu...   140   2e-52
ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus ...   137   5e-52
ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   140   1e-51
ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vi...   137   2e-51
emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera]   137   2e-51

>ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cucumis sativus]
          Length = 617

 Score =  140 bits (354), Expect(2) = 2e-52
 Identities = 62/72 (86%), Positives = 70/72 (97%)
 Frame = +2

Query: 2   ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181
           +LQMGLRL+APGGMQIR+LHRWILKCHACY VT EIGRIFCPKCGNGGTLRKVAVTVGEN
Sbjct: 451 LLQMGLRLLAPGGMQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGEN 510

Query: 182 GIVIAARRPRVS 217
           G+V+AAR+PR++
Sbjct: 511 GVVLAARKPRIT 522



 Score = 90.1 bits (222), Expect(2) = 2e-52
 Identities = 44/57 (77%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
 Frame = +3

Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476
           GTKFSLP+PQGGRDAITKN VLREDQLPQKFL+PKTKKK NK  D+ FA +  F HH
Sbjct: 525 GTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHH 581


>ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus communis]
           gi|223549677|gb|EEF51165.1| RNA-binding protein nob1,
           putative [Ricinus communis]
          Length = 628

 Score =  137 bits (345), Expect(2) = 5e-52
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +2

Query: 2   ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181
           +LQMGLRL+APGGMQIR+LHRWILKCHACY VT EIGRIFCPKCGNGGTLRKVA+TVGEN
Sbjct: 464 LLQMGLRLLAPGGMQIRQLHRWILKCHACYTVTAEIGRIFCPKCGNGGTLRKVAITVGEN 523

Query: 182 GIVIAARRPRVS 217
           GIV+A  RPR+S
Sbjct: 524 GIVLADCRPRIS 535



 Score = 92.4 bits (228), Expect(2) = 5e-52
 Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
 Frame = +3

Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476
           GTKFSLP+PQGGRDAITKN +LREDQLPQK LYPKTKKK NK  DD FA + IF HH
Sbjct: 538 GTKFSLPLPQGGRDAITKNLILREDQLPQKLLYPKTKKKVNKQGDDFFAVDDIFSHH 594


>ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein NOB1-like
           [Cucumis sativus]
          Length = 617

 Score =  140 bits (354), Expect(2) = 1e-51
 Identities = 62/72 (86%), Positives = 70/72 (97%)
 Frame = +2

Query: 2   ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181
           +LQMGLRL+APGGMQIR+LHRWILKCHACY VT EIGRIFCPKCGNGGTLRKVAVTVGEN
Sbjct: 451 LLQMGLRLLAPGGMQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGEN 510

Query: 182 GIVIAARRPRVS 217
           G+V+AAR+PR++
Sbjct: 511 GVVLAARKPRIT 522



 Score = 87.8 bits (216), Expect(2) = 1e-51
 Identities = 43/57 (75%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
 Frame = +3

Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476
           GTKFSLP+PQGGRDAITKN VLREDQLPQKFL+P TKKK NK  D+ FA +  F HH
Sbjct: 525 GTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPXTKKKVNKQGDEFFAVDDFFSHH 581


>ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vitis vinifera]
          Length = 633

 Score =  137 bits (346), Expect(2) = 2e-51
 Identities = 61/72 (84%), Positives = 70/72 (97%)
 Frame = +2

Query: 2   ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181
           +LQMGLRL+APGGMQIR+LHRWILKCHAC +VT EIGRIFCP+CGNGGTLRKVAVTVGEN
Sbjct: 469 LLQMGLRLLAPGGMQIRQLHRWILKCHACNEVTAEIGRIFCPRCGNGGTLRKVAVTVGEN 528

Query: 182 GIVIAARRPRVS 217
           GI++AAR+PR+S
Sbjct: 529 GIILAARKPRIS 540



 Score = 89.7 bits (221), Expect(2) = 2e-51
 Identities = 42/57 (73%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
 Frame = +3

Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476
           GTKFSLP+P+GGRDAITKNP+LREDQLP K L+PKTKKK NK  D+ FAS+  F HH
Sbjct: 543 GTKFSLPLPRGGRDAITKNPILREDQLPHKLLHPKTKKKANKPGDEFFASDDFFSHH 599


>emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera]
          Length = 621

 Score =  137 bits (346), Expect(2) = 2e-51
 Identities = 61/72 (84%), Positives = 70/72 (97%)
 Frame = +2

Query: 2   ILQMGLRLVAPGGMQIRELHRWILKCHACYKVTTEIGRIFCPKCGNGGTLRKVAVTVGEN 181
           +LQMGLRL+APGGMQIR+LHRWILKCHAC +VT EIGRIFCP+CGNGGTLRKVAVTVGEN
Sbjct: 457 LLQMGLRLLAPGGMQIRQLHRWILKCHACNEVTAEIGRIFCPRCGNGGTLRKVAVTVGEN 516

Query: 182 GIVIAARRPRVS 217
           GI++AAR+PR+S
Sbjct: 517 GIILAARKPRIS 528



 Score = 89.7 bits (221), Expect(2) = 2e-51
 Identities = 42/57 (73%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
 Frame = +3

Query: 309 GTKFSLPMPQGGRDAITKNPVLREDQLPQKFLYPKTKKK-NKDEDDIFASNHIFLHH 476
           GTKFSLP+P+GGRDAITKNP+LREDQLP K L+PKTKKK NK  D+ FAS+  F HH
Sbjct: 531 GTKFSLPLPRGGRDAITKNPILREDQLPHKLLHPKTKKKANKPGDEFFASDDFFSHH 587


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