BLASTX nr result

ID: Cnidium21_contig00004083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004083
         (1931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   468   e-129
emb|CBI26041.3| unnamed protein product [Vitis vinifera]              454   e-125
emb|CAN83429.1| hypothetical protein VITISV_034872 [Vitis vinifera]   414   e-113
ref|XP_004147668.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   405   e-110
ref|XP_002468672.1| hypothetical protein SORBIDRAFT_01g050040 [S...   400   e-109

>ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Vitis
            vinifera]
          Length = 707

 Score =  468 bits (1205), Expect = e-129
 Identities = 266/516 (51%), Positives = 334/516 (64%), Gaps = 19/516 (3%)
 Frame = +3

Query: 228  IVARAAYTRRKLETAGAYELIDDETGDKVIVWGXXXXXXXXXXXXXXXXXQWKPEDXXXX 407
            ++  A Y+RR+++T GAY+LIDDETG+K IVWG                  W P D    
Sbjct: 42   MLVTARYSRRQMDTPGAYQLIDDETGEKFIVWGGIDDDPPIPSKDVL---SWNPVDNNTP 98

Query: 408  XXXXXXXXXXXXXEGEEY----KSKIKGNKILAGSFGRLKVQKVRKLARATSSSQQTVYT 575
                            +     K++ KG   + GSFGRLK Q+V+ L   TS +++ +  
Sbjct: 99   TPSKDGHAGIEPAAAVKKDVFPKAQTKG---VTGSFGRLKAQRVKALTTKTSKAKRELNE 155

Query: 576  AT-KDMTVDSPNENEKLAVQRNFDALRDKL-------NVSRASRSQDNQNTTRRKAMTRX 731
                ++ V+       +      + + +K        N SRA R ++ ++  +     + 
Sbjct: 156  CDDNELEVEGAPSRRSIGSHSELEFMDEKKKLLIHGGNASRAFRRREIKDVIQTTGEIKD 215

Query: 732  XXXXXXXXXXXXXXXLPKHQTRSPKYQRTDPRSSEA-----RTSAASFRGWSRGVPMEDE 896
                             + Q    K  R+D + + A     R S A+ +GW  G  M + 
Sbjct: 216  KIHSDKTVKRDIGK-FSELQITPEKPHRSDNKIAGADVLVPRVSTANLQGWGYGETMRN- 273

Query: 897  YEYRPTVYPKKGKKAN--ADSDFFSIKTFKDMGCTEYMIKSLQSRLFNRPSHIQAMAFAP 1070
            +E+  T  PK+  K N  ADSDFFS K+F+D+GC++YMI+SL+ +LF RPSHIQAMAFA 
Sbjct: 274  FEFETTNIPKRRGKGNSLADSDFFSGKSFRDLGCSDYMIESLRGQLFVRPSHIQAMAFAT 333

Query: 1071 VFEKKSCIVADQSGSGKTLAYLLPVIQRIRQEELEGIGKSLPQNPRVVILVPTAELASQV 1250
            V E KSCI+ADQSGSGKTLAYLLPVIQR+R+EEL+G+GKS    P+VVILVPTAELASQV
Sbjct: 334  VMEGKSCIIADQSGSGKTLAYLLPVIQRLREEELQGLGKSSAGCPQVVILVPTAELASQV 393

Query: 1251 LTNCRLMSKFGVPFRSMVATGGFKQKTQLESLRQELDVLIVTPGRLTYLVKEGFLQLTNL 1430
            L+NCR +SKFG PFRSM ATGGF+Q+TQLE+L+Q+LDVLI TPGR  +L+KEGFLQLTNL
Sbjct: 394  LSNCRSISKFGAPFRSMAATGGFRQRTQLENLQQDLDVLIATPGRFMFLIKEGFLQLTNL 453

Query: 1431 TCAVLDEVDILYSSEDFEPALQILMNSSPYTTQYLFVTATLPVNIYNKLVEVFPDCEVIM 1610
             CAVLDEVDIL + EDFE ALQ L+NSSP T QYLFVTATLPV IYNKLVEVFPDCEVIM
Sbjct: 454  RCAVLDEVDILLNDEDFELALQTLINSSPVTMQYLFVTATLPVGIYNKLVEVFPDCEVIM 513

Query: 1611 GPGMHRTSPGLEEILVDCSGDDGAEKTPETAFLNKK 1718
            GPGMHR S  LEE+LVDCSGDDG EKTPE+AFLNKK
Sbjct: 514  GPGMHRISSRLEEVLVDCSGDDGTEKTPESAFLNKK 549


>emb|CBI26041.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  454 bits (1168), Expect = e-125
 Identities = 263/508 (51%), Positives = 317/508 (62%), Gaps = 11/508 (2%)
 Frame = +3

Query: 228  IVARAAYTRRKLETAGAYELIDDETGDKVIVWGXXXXXXXXXXXXXXXXXQWKPEDXXXX 407
            ++  A Y+RR+++T GAY+LIDDETG+K IVWG                  W P D    
Sbjct: 42   MLVTARYSRRQMDTPGAYQLIDDETGEKFIVWGGIDDDPPIPSKDVL---SWNPVDNNTP 98

Query: 408  XXXXXXXXXXXXXEGEEY----KSKIKGNKILAGSFGRLKVQKVRKLARATSSSQQTVYT 575
                            +     K++ KG   + GSFGRLK Q+V+ L   T         
Sbjct: 99   TPSKDGHAGIEPAAAVKKDVFPKAQTKG---VTGSFGRLKAQRVKALTTKT--------- 146

Query: 576  ATKDMTVDSPNENEKLAVQRNFDALRDKLNVSRASRSQDNQNTTRRKAMTRXXXXXXXXX 755
                                           S+A R  +       K + R         
Sbjct: 147  -------------------------------SKAKRELNEYKIHSDKTVKRDIGK----- 170

Query: 756  XXXXXXXLPKHQTRSPKYQRTDPRSSEA-----RTSAASFRGWSRGVPMEDEYEYRPTVY 920
                     + Q    K  R+D + + A     R S A+ +GW  G  M + +E+  T  
Sbjct: 171  -------FSELQITPEKPHRSDNKIAGADVLVPRVSTANLQGWGYGETMRN-FEFETTNI 222

Query: 921  PKKGKKAN--ADSDFFSIKTFKDMGCTEYMIKSLQSRLFNRPSHIQAMAFAPVFEKKSCI 1094
            PK+  K N  ADSDFFS K+F+D+GC++YMI+SL+ +LF RPSHIQAMAFA V E KSCI
Sbjct: 223  PKRRGKGNSLADSDFFSGKSFRDLGCSDYMIESLRGQLFVRPSHIQAMAFATVMEGKSCI 282

Query: 1095 VADQSGSGKTLAYLLPVIQRIRQEELEGIGKSLPQNPRVVILVPTAELASQVLTNCRLMS 1274
            +ADQSGSGKTLAYLLPVIQR+R+EEL+G+GKS    P+VVILVPTAELASQVL+NCR +S
Sbjct: 283  IADQSGSGKTLAYLLPVIQRLREEELQGLGKSSAGCPQVVILVPTAELASQVLSNCRSIS 342

Query: 1275 KFGVPFRSMVATGGFKQKTQLESLRQELDVLIVTPGRLTYLVKEGFLQLTNLTCAVLDEV 1454
            KFG PFRSM ATGGF+Q+TQLE+L+Q+LDVLI TPGR  +L+KEGFLQLTNL CAVLDEV
Sbjct: 343  KFGAPFRSMAATGGFRQRTQLENLQQDLDVLIATPGRFMFLIKEGFLQLTNLRCAVLDEV 402

Query: 1455 DILYSSEDFEPALQILMNSSPYTTQYLFVTATLPVNIYNKLVEVFPDCEVIMGPGMHRTS 1634
            DIL + EDFE ALQ L+NSSP T QYLFVTATLPV IYNKLVEVFPDCEVIMGPGMHR S
Sbjct: 403  DILLNDEDFELALQTLINSSPVTMQYLFVTATLPVGIYNKLVEVFPDCEVIMGPGMHRIS 462

Query: 1635 PGLEEILVDCSGDDGAEKTPETAFLNKK 1718
              LEE+LVDCSGDDG EKTPE+AFLNKK
Sbjct: 463  SRLEEVLVDCSGDDGTEKTPESAFLNKK 490


>emb|CAN83429.1| hypothetical protein VITISV_034872 [Vitis vinifera]
          Length = 563

 Score =  414 bits (1064), Expect = e-113
 Identities = 217/322 (67%), Positives = 249/322 (77%), Gaps = 29/322 (9%)
 Frame = +3

Query: 840  RTSAASFRGWSRGVPMEDEYEYRPTVYPKKGKKAN--ADSDFFSIKTFKDMGCTEYMIKS 1013
            R S A+ +GW  G  M + +E+  T  PK+  K N  ADSDFFS K+F+D+GC++YMI+S
Sbjct: 85   RVSTANLQGWGYGETMRN-FEFETTNIPKRRGKGNSLADSDFFSGKSFRDLGCSDYMIES 143

Query: 1014 LQSRLFNRPSHIQAMAFAPVFEKKSCIVADQSGSGKTLAYLLPVIQRIRQEELEGIGKSL 1193
            L+ +LF RPSHIQAMAFA V E KSCI+ADQSGSGKTLAYLLPVIQR+R+EEL+G+GKS 
Sbjct: 144  LRGQLFVRPSHIQAMAFATVMEGKSCIIADQSGSGKTLAYLLPVIQRLREEELQGLGKSS 203

Query: 1194 PQNPRVVILVPTAELASQ---------------------------VLTNCRLMSKFGVPF 1292
               PRVVILVPTAELASQ                           VL+NCR +SKFG PF
Sbjct: 204  AGCPRVVILVPTAELASQMRFCYVCGSFNANNVVQEHKDKTIHTKVLSNCRSISKFGAPF 263

Query: 1293 RSMVATGGFKQKTQLESLRQELDVLIVTPGRLTYLVKEGFLQLTNLTCAVLDEVDILYSS 1472
            RSM ATGGF+Q+TQLE+L+Q+LDVLI TPGR  +L+KEGFLQLTNL CAVLDEVDIL + 
Sbjct: 264  RSMAATGGFRQRTQLENLQQDLDVLIATPGRFMFLIKEGFLQLTNLRCAVLDEVDILLND 323

Query: 1473 EDFEPALQILMNSSPYTTQYLFVTATLPVNIYNKLVEVFPDCEVIMGPGMHRTSPGLEEI 1652
            EDFE ALQ L+NSSP T QYLFVTATLPV IYNKLVEVFPDCEVIMGPGMHR S  LEE+
Sbjct: 324  EDFELALQTLINSSPVTMQYLFVTATLPVGIYNKLVEVFPDCEVIMGPGMHRISSRLEEV 383

Query: 1653 LVDCSGDDGAEKTPETAFLNKK 1718
            LVDCSGDDG EKTPE+AFLNKK
Sbjct: 384  LVDCSGDDGTEKTPESAFLNKK 405


>ref|XP_004147668.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Cucumis
            sativus]
          Length = 648

 Score =  405 bits (1040), Expect = e-110
 Identities = 232/502 (46%), Positives = 305/502 (60%), Gaps = 9/502 (1%)
 Frame = +3

Query: 240  AAYTRRKLETAGAYELIDDETGDKVIVWGXXXXXXXXXXXXXXXXXQWKPEDXXXXXXXX 419
            A Y R+ +++AG Y+L D++                               D        
Sbjct: 54   AGYARKSVDSAGVYQLTDED-------------------------------DFTVTSSEE 82

Query: 420  XXXXXXXXXEGEEYKSKIKGNKILAGSFGRLKVQKVRKLARATSSSQQTVYTATKDMTV- 596
                     + E+ K+     +I  GSFGRLK QKV+ +    S + + +    +  T  
Sbjct: 83   LRYDGDETVDDEDTKTSGMRKRISIGSFGRLKTQKVKAIVTKGSRTNEELRNDVRKPTPE 142

Query: 597  -------DSPNENEK-LAVQRNFDALRDKLNVSRASRSQDNQNTTRRKAMTRXXXXXXXX 752
                   D P    K +  ++  +ALR+    SR S  QD +                  
Sbjct: 143  DGSPHISDYPRSKVKTMGEKKRINALRNVEKNSRPSELQDRE------------------ 184

Query: 753  XXXXXXXXLPKHQTRSPKYQRTDPRSSEARTSAASFRGWSRGVPMEDEYEYRPTVYPKKG 932
                      +HQT +P   R++P  S    S + FRGW    P   EYE  PT +  K 
Sbjct: 185  ----------RHQTTAPNLSRSEPLVSSG--SGSYFRGWGSRGPYGSEYE--PTEH--KQ 228

Query: 933  KKANADSDFFSIKTFKDMGCTEYMIKSLQSRLFNRPSHIQAMAFAPVFEKKSCIVADQSG 1112
            +K +++  F+S K+FK++GC+EYMI+SL+ + F RPS IQA AF+ V + KSCI++DQSG
Sbjct: 229  QKISSEKGFYSRKSFKELGCSEYMIESLRRQNFVRPSQIQAKAFSSVIDGKSCIISDQSG 288

Query: 1113 SGKTLAYLLPVIQRIRQEELEGIGKSLPQNPRVVILVPTAELASQVLTNCRLMSKFGVPF 1292
            SGKTLAYL+P+IQR+RQEELEG  KS  ++P++VI+VPTAELASQVL+NCR +SKFGVPF
Sbjct: 289  SGKTLAYLVPLIQRLRQEELEGHQKSSSKSPQIVIIVPTAELASQVLSNCRSISKFGVPF 348

Query: 1293 RSMVATGGFKQKTQLESLRQELDVLIVTPGRLTYLVKEGFLQLTNLTCAVLDEVDILYSS 1472
            RSMV TGGF+QKTQL++L++ +DVLI TPGRL  L+ EGFL L+NL CAV+DEVDIL++ 
Sbjct: 349  RSMVVTGGFRQKTQLDNLQEGVDVLIATPGRLMLLINEGFLLLSNLRCAVMDEVDILFND 408

Query: 1473 EDFEPALQILMNSSPYTTQYLFVTATLPVNIYNKLVEVFPDCEVIMGPGMHRTSPGLEEI 1652
            EDFE AL+ LM S+P  TQYLFVTATLPV+IYN LVE FPDCEVIMGPG+HR SP LEE+
Sbjct: 409  EDFEVALRSLMKSAPVNTQYLFVTATLPVDIYNTLVENFPDCEVIMGPGVHRISPSLEEV 468

Query: 1653 LVDCSGDDGAEKTPETAFLNKK 1718
            LVDCSG+D   KTP+ AF NKK
Sbjct: 469  LVDCSGEDEQHKTPDAAFSNKK 490


>ref|XP_002468672.1| hypothetical protein SORBIDRAFT_01g050040 [Sorghum bicolor]
            gi|241922526|gb|EER95670.1| hypothetical protein
            SORBIDRAFT_01g050040 [Sorghum bicolor]
          Length = 656

 Score =  400 bits (1028), Expect = e-109
 Identities = 233/523 (44%), Positives = 304/523 (58%), Gaps = 19/523 (3%)
 Frame = +3

Query: 207  CSGARVSIVARAA--------YTRRKLETAGAYELIDDETGDKVIVWGXXXXXXXXXXXX 362
            C+G+R S  A A         + +  ++T GAY L+D  TG  VIVWG            
Sbjct: 29   CTGSRRSWAAAATAEGDETRGFDKVPMDTPGAYRLVDRATGRSVIVWGGTDDGDEAAIPS 88

Query: 363  XXXXXQWKPEDXXXXXXXXXXXXXXXXXEGEEYKSKIKGNKILAGSFGRLKVQKVRKLA- 539
                 + +  D                       S+  G     G+FGRLK QK++ L  
Sbjct: 89   PAVLSRTRTTDRR--------------------SSQGVGGGTGIGNFGRLKAQKIKSLVT 128

Query: 540  ----RATSSSQQTVYTATKDMTVDSPNENEKLAVQRNFDALRDKLNVSRASRSQDNQNTT 707
                R   SS ++    + + + D   + E+   +R       +    RA  S D +N  
Sbjct: 129  RSAHRKRESSSRSSTNRSGESSFDGSGDEEESYFERRKPVSDSE---HRAKLSSDYRNGR 185

Query: 708  RRKAMTRXXXXXXXXXXXXXXXXLPKHQTRSP--KYQRTDPRSSEARTSAASFRGWSRGV 881
             R A                      H   S   +Y+  D     A  + +  +GW    
Sbjct: 186  TRGA----------------------HSLTSVLGQYRGADDTGFPASEATSGSKGWGNVA 223

Query: 882  PM----EDEYEYRPTVYPKKGKKANADSDFFSIKTFKDMGCTEYMIKSLQSRLFNRPSHI 1049
             +    +++ +  P  +P++  K   DS FFS +TFK++GC++ ++  L++  F RPSHI
Sbjct: 224  DVTYGRQNQKQREPLNFPQR--KGPLDSGFFSRRTFKEIGCSDEILVVLRNFDFPRPSHI 281

Query: 1050 QAMAFAPVFEKKSCIVADQSGSGKTLAYLLPVIQRIRQEELEGIGKSLPQNPRVVILVPT 1229
            QAMA+ P+ E +SC++ADQSGSGKTLAYL P+IQ +R EE++G+ KS P+NPRV++L PT
Sbjct: 282  QAMAYGPILEGRSCVIADQSGSGKTLAYLCPIIQNLRSEEVQGLHKSSPRNPRVIVLTPT 341

Query: 1230 AELASQVLTNCRLMSKFGVPFRSMVATGGFKQKTQLESLRQELDVLIVTPGRLTYLVKEG 1409
            AELASQVL NCRL+SK GVPFRSMVATGGF+QKTQLESL QELDV+I TPGR  YL++EG
Sbjct: 342  AELASQVLNNCRLISKSGVPFRSMVATGGFRQKTQLESLNQELDVIIATPGRFLYLLQEG 401

Query: 1410 FLQLTNLTCAVLDEVDILYSSEDFEPALQILMNSSPYTTQYLFVTATLPVNIYNKLVEVF 1589
            F+QL NL C VLDEVDIL+  E FE  L  L+  +P TTQYLFVTATLP++IYNK+VE F
Sbjct: 402  FVQLANLRCVVLDEVDILFGEEGFEQVLHQLITVAPVTTQYLFVTATLPLDIYNKVVETF 461

Query: 1590 PDCEVIMGPGMHRTSPGLEEILVDCSGDDGAEKTPETAFLNKK 1718
            PDCEVIMGPG+HRTS  LEEILVDCSGDD  EK PETAF NKK
Sbjct: 462  PDCEVIMGPGVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKK 504


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