BLASTX nr result

ID: Cnidium21_contig00004078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004078
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Gl...   315   1e-83
ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine...   314   2e-83
ref|XP_002299926.1| predicted protein [Populus trichocarpa] gi|1...   314   2e-83
gb|ACU16800.1| unknown [Glycine max]                                  313   3e-83
gb|ACU19111.1| unknown [Glycine max]                                  313   5e-83

>ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
          Length = 220

 Score =  315 bits (806), Expect = 1e-83
 Identities = 163/219 (74%), Positives = 171/219 (78%), Gaps = 2/219 (0%)
 Frame = +1

Query: 37  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 216
           MGISRDSMH                 YELGRQPANTKLSSNKT           KWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 396
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 397 EIGRKKKTSAAAK--XXXXXXXXXXXXXXXSNHVQRKIEKRQEDRKIDSHIEEQFGGGRL 570
           EIGRKKKT+A  +                 SNHVQRK+EKRQ+DRK+D+HIEEQFGGGRL
Sbjct: 121 EIGRKKKTAAKKETAEEGGDAAAAAEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRL 180

Query: 571 LAAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 687
           LA ISSRPGQCGRADGYILEGKELEFYMKKLQ+KKGKGA
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGA 219


>ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine max]
          Length = 219

 Score =  314 bits (805), Expect = 2e-83
 Identities = 163/218 (74%), Positives = 171/218 (78%), Gaps = 1/218 (0%)
 Frame = +1

Query: 37  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 216
           MGISRDSMH                 YELGRQPANTKLSSNKT           KWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 396
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 397 EIGRKKKTSAAAK-XXXXXXXXXXXXXXXSNHVQRKIEKRQEDRKIDSHIEEQFGGGRLL 573
           EIGRKKKT+A  +                SNH+QRK+EKRQ+DRK+D+HIEEQFGGGRLL
Sbjct: 121 EIGRKKKTAAKKETAEEGAAAVAVEEAKKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLL 180

Query: 574 AAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 687
           A ISSRPGQCGRADGYILEGKELEFYMKKLQ+KKGKGA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGA 218


>ref|XP_002299926.1| predicted protein [Populus trichocarpa] gi|118481469|gb|ABK92677.1|
           unknown [Populus trichocarpa]
           gi|222847184|gb|EEE84731.1| predicted protein [Populus
           trichocarpa]
          Length = 220

 Score =  314 bits (805), Expect = 2e-83
 Identities = 162/219 (73%), Positives = 170/219 (77%)
 Frame = +1

Query: 37  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 216
           MGISRDSMH                 YELGRQPA+TKLSSNKT           KWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 396
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 397 EIGRKKKTSAAAKXXXXXXXXXXXXXXXSNHVQRKIEKRQEDRKIDSHIEEQFGGGRLLA 576
           +IGRKKKT+ AAK               S HVQRK+EKRQ+ RK+D HIEEQFG GRLLA
Sbjct: 121 DIGRKKKTAPAAKKEGEDGEAAVEEEKKSKHVQRKLEKRQQTRKLDPHIEEQFGSGRLLA 180

Query: 577 AISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGATA 693
           +ISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGA A
Sbjct: 181 SISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGA 219


>gb|ACU16800.1| unknown [Glycine max]
          Length = 243

 Score =  313 bits (803), Expect = 3e-83
 Identities = 163/227 (71%), Positives = 174/227 (76%), Gaps = 1/227 (0%)
 Frame = +1

Query: 37  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 216
           MGISRDSMH                 YELGRQPANTKLSSNKT           KWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWGKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 396
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 397 EIGRKKKTSAAAK-XXXXXXXXXXXXXXXSNHVQRKIEKRQEDRKIDSHIEEQFGGGRLL 573
           EIGRKKKT+A  +                SNH+QRK+EKRQ+DRK+D+HIEEQFGGGRLL
Sbjct: 121 EIGRKKKTAAKKETAEEGAAAVAVEEAKKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLL 180

Query: 574 AAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGATA*KIYCIY 714
           A ISSRPGQCGRADGYILEGKELEFYMKKLQ+KKGKG     ++ I+
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGCCLILVFPIF 227


>gb|ACU19111.1| unknown [Glycine max]
          Length = 220

 Score =  313 bits (801), Expect = 5e-83
 Identities = 162/219 (73%), Positives = 171/219 (78%), Gaps = 2/219 (0%)
 Frame = +1

Query: 37  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 216
           MGISRDSMH                 YELGRQPA+TKLSSNKT           KWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 396
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 397 EIGRKKKTSAAAK--XXXXXXXXXXXXXXXSNHVQRKIEKRQEDRKIDSHIEEQFGGGRL 570
           EIGRKKKT+A  +                 SNHVQRK+EKRQ+DRK+D+HIEEQFGGGRL
Sbjct: 121 EIGRKKKTAAKKETAEEGGDAVAATEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRL 180

Query: 571 LAAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 687
           LA ISSRPGQCGRADGYILEGKELEFYMKKLQ+KKGKGA
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGA 219


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