BLASTX nr result

ID: Cnidium21_contig00004076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004076
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine...   306   7e-81
gb|ACU16800.1| unknown [Glycine max]                                  303   4e-80
ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Gl...   302   1e-79
ref|XP_002534344.1| 40S ribosomal protein S8, putative [Ricinus ...   300   3e-79
gb|ACU19111.1| unknown [Glycine max]                                  300   4e-79

>ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine max]
          Length = 219

 Score =  306 bits (783), Expect = 7e-81
 Identities = 160/219 (73%), Positives = 167/219 (76%)
 Frame = -1

Query: 910 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 731
           MGISRDSMH                KYELGRQPANTKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 730 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGV 551
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVK AIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 550 DIGRXXXXXXXXXXXXXXXXXXXXXXXKKSNHVQRKIEKRQEDRKLDSHVEEQFGGGRLL 371
           +IGR                       KKSNH+QRK+EKRQ+DRKLD+H+EEQFGGGRLL
Sbjct: 121 EIGRKKKTAAKKETAEEGAAAVAVEEAKKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLL 180

Query: 370 AAISSRPGQCGRCDGYILEGKELEFYMKKLQRKKGKGAA 254
           A ISSRPGQCGR DGYILEGKELEFYMKKLQ+KKGKGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 219


>gb|ACU16800.1| unknown [Glycine max]
          Length = 243

 Score =  303 bits (777), Expect = 4e-80
 Identities = 163/239 (68%), Positives = 172/239 (71%), Gaps = 2/239 (0%)
 Frame = -1

Query: 910 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 731
           MGISRDSMH                KYELGRQPANTKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWGKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 730 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGV 551
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVK AIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 550 DIGRXXXXXXXXXXXXXXXXXXXXXXXKKSNHVQRKIEKRQEDRKLDSHVEEQFGGGRLL 371
           +IGR                       KKSNH+QRK+EKRQ+DRKLD+H+EEQFGGGRLL
Sbjct: 121 EIGRKKKTAAKKETAEEGAAAVAVEEAKKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLL 180

Query: 370 AAISSRPGQCGRCDGYILEGKELEFYMKKLQRKKGKGAAA*CSHD--LYGDSWLYISFI 200
           A ISSRPGQCGR DGYILEGKELEFYMKKLQ+KKGKG          LYG S  Y+  +
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGCCLILVFPIFLYGFSCFYMLLV 239


>ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
          Length = 220

 Score =  302 bits (773), Expect = 1e-79
 Identities = 160/220 (72%), Positives = 167/220 (75%), Gaps = 1/220 (0%)
 Frame = -1

Query: 910 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 731
           MGISRDSMH                KYELGRQPANTKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 730 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGV 551
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVK AIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 550 DIGR-XXXXXXXXXXXXXXXXXXXXXXXKKSNHVQRKIEKRQEDRKLDSHVEEQFGGGRL 374
           +IGR                        KKSNHVQRK+EKRQ+DRKLD+H+EEQFGGGRL
Sbjct: 121 EIGRKKKTAAKKETAEEGGDAAAAAEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRL 180

Query: 373 LAAISSRPGQCGRCDGYILEGKELEFYMKKLQRKKGKGAA 254
           LA ISSRPGQCGR DGYILEGKELEFYMKKLQ+KKGKGAA
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 220


>ref|XP_002534344.1| 40S ribosomal protein S8, putative [Ricinus communis]
           gi|223525453|gb|EEF28038.1| 40S ribosomal protein S8,
           putative [Ricinus communis]
          Length = 221

 Score =  300 bits (769), Expect = 3e-79
 Identities = 160/220 (72%), Positives = 164/220 (74%)
 Frame = -1

Query: 910 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 731
           MGISRDSMH                KYELGRQ ANTKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQAANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 730 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGV 551
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVK AIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 550 DIGRXXXXXXXXXXXXXXXXXXXXXXXKKSNHVQRKIEKRQEDRKLDSHVEEQFGGGRLL 371
           DIGR                       KKSNHV RK+EKRQ+DRKLD+H+EEQF GGRLL
Sbjct: 121 DIGRKKKTVAKKETEEGEGEGAAAEESKKSNHVIRKLEKRQKDRKLDAHIEEQFWGGRLL 180

Query: 370 AAISSRPGQCGRCDGYILEGKELEFYMKKLQRKKGKGAAA 251
           A ISSRPGQCGR DGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 220


>gb|ACU19111.1| unknown [Glycine max]
          Length = 220

 Score =  300 bits (768), Expect = 4e-79
 Identities = 159/220 (72%), Positives = 167/220 (75%), Gaps = 1/220 (0%)
 Frame = -1

Query: 910 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 731
           MGISRDSMH                KYELGRQPA+TKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 730 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGV 551
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVK AIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 550 DIGR-XXXXXXXXXXXXXXXXXXXXXXXKKSNHVQRKIEKRQEDRKLDSHVEEQFGGGRL 374
           +IGR                        KKSNHVQRK+EKRQ+DRKLD+H+EEQFGGGRL
Sbjct: 121 EIGRKKKTAAKKETAEEGGDAVAATEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRL 180

Query: 373 LAAISSRPGQCGRCDGYILEGKELEFYMKKLQRKKGKGAA 254
           LA ISSRPGQCGR DGYILEGKELEFYMKKLQ+KKGKGAA
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 220


Top