BLASTX nr result

ID: Cnidium21_contig00004056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004056
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150961.1| PREDICTED: 60S ribosomal protein L35-like [C...   115   5e-24
ref|XP_004149815.1| PREDICTED: 60S ribosomal protein L35-like [C...   114   6e-24
emb|CBI33174.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002312062.1| predicted protein [Populus trichocarpa] gi|1...   114   8e-24
ref|XP_002315252.1| predicted protein [Populus trichocarpa] gi|1...   114   1e-23

>ref|XP_004150961.1| PREDICTED: 60S ribosomal protein L35-like [Cucumis sativus]
           gi|449522333|ref|XP_004168181.1| PREDICTED: 60S
           ribosomal protein L35-like [Cucumis sativus]
          Length = 123

 Score =  115 bits (287), Expect = 5e-24
 Identities = 62/68 (91%), Positives = 64/68 (94%)
 Frame = +1

Query: 82  MARIKVHELRTKSKPDLLAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIAQVLTV 261
           MARIKVHELR KSK DLLAQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 262 MQQKQKAA 285
           + QKQKAA
Sbjct: 61  ISQKQKAA 68


>ref|XP_004149815.1| PREDICTED: 60S ribosomal protein L35-like [Cucumis sativus]
          Length = 123

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/68 (91%), Positives = 63/68 (92%)
 Frame = +1

Query: 82  MARIKVHELRTKSKPDLLAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIAQVLTV 261
           MARIKVHELR KSK DLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 262 MQQKQKAA 285
           + QKQKAA
Sbjct: 61  ISQKQKAA 68


>emb|CBI33174.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/72 (84%), Positives = 66/72 (91%)
 Frame = +1

Query: 70  VSAAMARIKVHELRTKSKPDLLAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIAQ 249
           + AAMARIKVHELR K+K DLL QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQ
Sbjct: 48  IVAAMARIKVHELRGKTKADLLVQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQ 107

Query: 250 VLTVMQQKQKAA 285
           VLTV+ QKQKAA
Sbjct: 108 VLTVISQKQKAA 119


>ref|XP_002312062.1| predicted protein [Populus trichocarpa] gi|118485616|gb|ABK94658.1|
           unknown [Populus trichocarpa]
           gi|222851882|gb|EEE89429.1| predicted protein [Populus
           trichocarpa]
          Length = 123

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/67 (91%), Positives = 63/67 (94%)
 Frame = +1

Query: 82  MARIKVHELRTKSKPDLLAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIAQVLTV 261
           MARIKVHELR KSK DLLAQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRNKSKADLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 262 MQQKQKA 282
           + QKQKA
Sbjct: 61  ISQKQKA 67


>ref|XP_002315252.1| predicted protein [Populus trichocarpa] gi|118483689|gb|ABK93738.1|
           unknown [Populus trichocarpa]
           gi|118485344|gb|ABK94531.1| unknown [Populus
           trichocarpa] gi|222864292|gb|EEF01423.1| predicted
           protein [Populus trichocarpa]
          Length = 123

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/67 (91%), Positives = 63/67 (94%)
 Frame = +1

Query: 82  MARIKVHELRTKSKPDLLAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIAQVLTV 261
           MARIKVHELR KSK DLLAQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRQKSKTDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 262 MQQKQKA 282
           + QKQKA
Sbjct: 61  ISQKQKA 67


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