BLASTX nr result

ID: Cnidium21_contig00004028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004028
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272994.1| PREDICTED: transmembrane emp24 domain-contai...   303   5e-80
emb|CAN82472.1| hypothetical protein VITISV_039788 [Vitis vinifera]   300   4e-79
emb|CBI23839.3| unnamed protein product [Vitis vinifera]              299   9e-79
ref|XP_002303155.1| predicted protein [Populus trichocarpa] gi|2...   296   4e-78
ref|XP_002298173.1| predicted protein [Populus trichocarpa] gi|2...   293   6e-77

>ref|XP_002272994.1| PREDICTED: transmembrane emp24 domain-containing protein 10-like
           [Vitis vinifera]
          Length = 216

 Score =  303 bits (776), Expect = 5e-80
 Identities = 154/217 (70%), Positives = 177/217 (81%), Gaps = 5/217 (2%)
 Frame = +1

Query: 115 MMMMGDKIRVCMVLIFVV---LIQKGDAIWMSLPAASSTKCVTEEIHNNVVVLGDYVVIS 285
           M M G  + + ++L+  +   LI    AIW+S+P+ S TKCV+EEI NNVVVL DY+VI 
Sbjct: 1   MKMNGSGLVLRLLLLLCISDLLIPMSQAIWLSIPS-SGTKCVSEEIQNNVVVLADYLVIP 59

Query: 286 DDNVHPTPTISAKVTSPYGNTLHSNENATHGQFAFTTNEAGLYLACFWVDHH--GSGSVS 459
           DD+ H +PTIS KVTSPYGN LH  EN THGQFAFTT+EAG YLACFWVD H  G G VS
Sbjct: 60  DDHTHSSPTISIKVTSPYGNNLHHKENVTHGQFAFTTSEAGNYLACFWVDGHNQGGGDVS 119

Query: 460 MNLDWKTGIAAKDWESVARKEKIEGVELELRKLEGAVEAIHENLLYLKNREAEMRIVNEA 639
           +NLDWKTGI AKDWESVARKEKIEGVELELRKLEGAVEAIHENLLYLK+REAEMR+V+E 
Sbjct: 120 VNLDWKTGIGAKDWESVARKEKIEGVELELRKLEGAVEAIHENLLYLKSREAEMRMVSEK 179

Query: 640 TNSRVALYSMLSLAVCVGVSVLQIMHLKRFFQKKKLI 750
           TN+RVA YS++SL VC+ VS LQ+ HLKRFFQKKKLI
Sbjct: 180 TNARVAWYSIMSLGVCIAVSALQLWHLKRFFQKKKLI 216


>emb|CAN82472.1| hypothetical protein VITISV_039788 [Vitis vinifera]
          Length = 207

 Score =  300 bits (768), Expect = 4e-79
 Identities = 150/203 (73%), Positives = 171/203 (84%), Gaps = 2/203 (0%)
 Frame = +1

Query: 148 MVLIFVVLIQKGDAIWMSLPAASSTKCVTEEIHNNVVVLGDYVVISDDNVHPTPTISAKV 327
           ++ I  +LI    AIW+S+P+ S TKCV+EEI NNVVVL DY+VI DD+ H +PTIS KV
Sbjct: 6   LLCISDLLIPMSQAIWLSIPS-SGTKCVSEEIQNNVVVLADYLVIPDDHTHSSPTISIKV 64

Query: 328 TSPYGNTLHSNENATHGQFAFTTNEAGLYLACFWVDHH--GSGSVSMNLDWKTGIAAKDW 501
           TSPYGN LH  EN THGQFAFTT+EAG YLACFWV+ H  G G VS+NLDWKTGI AKDW
Sbjct: 65  TSPYGNNLHHKENVTHGQFAFTTSEAGNYLACFWVNGHNQGGGDVSVNLDWKTGIGAKDW 124

Query: 502 ESVARKEKIEGVELELRKLEGAVEAIHENLLYLKNREAEMRIVNEATNSRVALYSMLSLA 681
           ESVARKEKIEGVELELRKLEGAVEAIHENLLYLK+REAEMR+V+E TN+RVA YS++SL 
Sbjct: 125 ESVARKEKIEGVELELRKLEGAVEAIHENLLYLKSREAEMRMVSEKTNARVAWYSIMSLG 184

Query: 682 VCVGVSVLQIMHLKRFFQKKKLI 750
           VC+ VS LQ+ HLKRFFQKKKLI
Sbjct: 185 VCIAVSALQLWHLKRFFQKKKLI 207


>emb|CBI23839.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  299 bits (765), Expect = 9e-79
 Identities = 148/190 (77%), Positives = 165/190 (86%), Gaps = 2/190 (1%)
 Frame = +1

Query: 187 AIWMSLPAASSTKCVTEEIHNNVVVLGDYVVISDDNVHPTPTISAKVTSPYGNTLHSNEN 366
           AIW+S+P+ S TKCV+EEI NNVVVL DY+VI DD+ H +PTIS KVTSPYGN LH  EN
Sbjct: 4   AIWLSIPS-SGTKCVSEEIQNNVVVLADYLVIPDDHTHSSPTISIKVTSPYGNNLHHKEN 62

Query: 367 ATHGQFAFTTNEAGLYLACFWVDHH--GSGSVSMNLDWKTGIAAKDWESVARKEKIEGVE 540
            THGQFAFTT+EAG YLACFWVD H  G G VS+NLDWKTGI AKDWESVARKEKIEGVE
Sbjct: 63  VTHGQFAFTTSEAGNYLACFWVDGHNQGGGDVSVNLDWKTGIGAKDWESVARKEKIEGVE 122

Query: 541 LELRKLEGAVEAIHENLLYLKNREAEMRIVNEATNSRVALYSMLSLAVCVGVSVLQIMHL 720
           LELRKLEGAVEAIHENLLYLK+REAEMR+V+E TN+RVA YS++SL VC+ VS LQ+ HL
Sbjct: 123 LELRKLEGAVEAIHENLLYLKSREAEMRMVSEKTNARVAWYSIMSLGVCIAVSALQLWHL 182

Query: 721 KRFFQKKKLI 750
           KRFFQKKKLI
Sbjct: 183 KRFFQKKKLI 192


>ref|XP_002303155.1| predicted protein [Populus trichocarpa] gi|222840587|gb|EEE78134.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  296 bits (759), Expect = 4e-78
 Identities = 146/205 (71%), Positives = 169/205 (82%)
 Frame = +1

Query: 136 IRVCMVLIFVVLIQKGDAIWMSLPAASSTKCVTEEIHNNVVVLGDYVVISDDNVHPTPTI 315
           + +C   +F V       +W++LP  + TKCV+EEIHNNVVVL DYVV+SDD+ H  PTI
Sbjct: 15  VLICSSNLFTV----SQGVWLNLPP-TGTKCVSEEIHNNVVVLSDYVVVSDDHSH-IPTI 68

Query: 316 SAKVTSPYGNTLHSNENATHGQFAFTTNEAGLYLACFWVDHHGSGSVSMNLDWKTGIAAK 495
           S KVTSPYGNTLH  EN THGQFAFTT+EAG YLACFWVD H  G VS+N+DWKTGIAAK
Sbjct: 69  SVKVTSPYGNTLHQTENVTHGQFAFTTHEAGNYLACFWVDGHVQGDVSVNIDWKTGIAAK 128

Query: 496 DWESVARKEKIEGVELELRKLEGAVEAIHENLLYLKNREAEMRIVNEATNSRVALYSMLS 675
           DW+SVARKEKIEGVELELRKLEGAVEAIHENLLYLK REAEMR V+E TN+R+AL+S++S
Sbjct: 129 DWDSVARKEKIEGVELELRKLEGAVEAIHENLLYLKTREAEMRSVSETTNTRIALFSVMS 188

Query: 676 LAVCVGVSVLQIMHLKRFFQKKKLI 750
           L VC+ VS LQ+ HLK +FQKKKLI
Sbjct: 189 LGVCIAVSALQVWHLKHYFQKKKLI 213


>ref|XP_002298173.1| predicted protein [Populus trichocarpa] gi|222845431|gb|EEE82978.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  293 bits (749), Expect = 6e-77
 Identities = 144/191 (75%), Positives = 167/191 (87%), Gaps = 2/191 (1%)
 Frame = +1

Query: 184 DAIWMSLPAASSTKCVTEEIHNNVVVLGDYVVISDDNVHPTPTISAKVTSPYGNTLHSNE 363
           +A+W++LPA S TKCV+EEIHNNVVVL DYVV+SD++ H  P+IS KVTSPYGN LH  E
Sbjct: 4   EAVWLNLPA-SGTKCVSEEIHNNVVVLADYVVVSDNHSH-IPSISVKVTSPYGNNLHHKE 61

Query: 364 NATHGQFAFTTNEAGLYLACFWVDHH--GSGSVSMNLDWKTGIAAKDWESVARKEKIEGV 537
           N THGQFAFTT+EAG YLACFWVD H  GSG VS+N+DWKTGIAAKDW+SVARKEKIEGV
Sbjct: 62  NVTHGQFAFTTHEAGNYLACFWVDGHIQGSGDVSVNIDWKTGIAAKDWDSVARKEKIEGV 121

Query: 538 ELELRKLEGAVEAIHENLLYLKNREAEMRIVNEATNSRVALYSMLSLAVCVGVSVLQIMH 717
           ELELRKLEGAVEAIHENLLYLK+RE E+R V+E TN+RVAL+ ++SL VC+ VS LQ+ H
Sbjct: 122 ELELRKLEGAVEAIHENLLYLKSREEELRSVSEVTNTRVALFGIMSLGVCIAVSALQVWH 181

Query: 718 LKRFFQKKKLI 750
           LKR+FQKKKLI
Sbjct: 182 LKRYFQKKKLI 192


Top