BLASTX nr result

ID: Cnidium21_contig00004024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004024
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]           163   4e-38
ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium dist...   163   5e-38
ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [S...   161   1e-37
ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ...   161   2e-37
ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa...   160   3e-37

>ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
          Length = 145

 Score =  163 bits (413), Expect = 4e-38
 Identities = 81/117 (69%), Positives = 92/117 (78%), Gaps = 4/117 (3%)
 Frame = +1

Query: 136 LPFAPPQVNQVNKEPPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVVHARVVTDRNSGF 315
           +P  PP        P A+P+PNLFVSGLSKRTTTE L   FA+FGEVVHARVVTDR SG+
Sbjct: 29  VPTPPPGATPTPTRPTAEPNPNLFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGY 88

Query: 316 SKGFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSDNT----YGRR 474
           SKGFGFV+YAT+E+A  GI+GMDG+FLDGWVIFAEYARPRP PGQS N     YGR+
Sbjct: 89  SKGFGFVQYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQSLNNNSPQYGRQ 145


>ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
          Length = 153

 Score =  163 bits (412), Expect = 5e-38
 Identities = 82/115 (71%), Positives = 90/115 (78%)
 Frame = +1

Query: 118 STFTSGLPFAPPQVNQVNKEPPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVVHARVVT 297
           S FT   P  PP        P ADPSPNLFVSGLSKRTTT+GL  AFA+FGEV+HARVVT
Sbjct: 30  SAFTPPSPPTPP--------PKADPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVT 81

Query: 298 DRNSGFSKGFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSDNT 462
           DR +GFSKGFGFVRYA+VEDA  GI+GMDG+FLDGWVIFAEYARPRP P   + T
Sbjct: 82  DRVTGFSKGFGFVRYASVEDASKGIEGMDGKFLDGWVIFAEYARPRPPPQMGEGT 136


>ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
           gi|241941370|gb|EES14515.1| hypothetical protein
           SORBIDRAFT_07g002960 [Sorghum bicolor]
          Length = 140

 Score =  161 bits (408), Expect = 1e-37
 Identities = 81/105 (77%), Positives = 88/105 (83%)
 Frame = +1

Query: 142 FAPPQVNQVNKEPPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVVHARVVTDRNSGFSK 321
           FAPP+       P ADPSPNLFVSGLSKRTTTEGL  AFA+FGEVVHARVVTDR SGFSK
Sbjct: 19  FAPPKAPA--PRPQADPSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSK 76

Query: 322 GFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSD 456
           GFGFVRYAT E+A  GI+GMDG+FLDGWVIFAEYARPR  P Q++
Sbjct: 77  GFGFVRYATTEEATKGIEGMDGKFLDGWVIFAEYARPRAPPEQAE 121


>ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|147854770|emb|CAN78606.1| hypothetical protein
           VITISV_024164 [Vitis vinifera]
           gi|302143178|emb|CBI20473.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  161 bits (407), Expect = 2e-37
 Identities = 83/124 (66%), Positives = 96/124 (77%), Gaps = 4/124 (3%)
 Frame = +1

Query: 112 LYSTFTSGLPFAPPQVNQVNKE-PPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVVHAR 288
           L+ST T    F PP +       PPA+PS NLFVSGLSKRTT+EGLH AF++FG+VV+AR
Sbjct: 16  LFSTST----FIPPPITAATPATPPAEPSTNLFVSGLSKRTTSEGLHEAFSKFGQVVNAR 71

Query: 289 VVTDRNSGFSKGFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSDN--- 459
           VVTDR SG+SKGFGFVRY ++EDA  GIKGMDG+FLDGWVIFAEYARPRP P   +N   
Sbjct: 72  VVTDRVSGYSKGFGFVRYVSLEDAAEGIKGMDGKFLDGWVIFAEYARPRPPPSPQNNGAP 131

Query: 460 TYGR 471
            YGR
Sbjct: 132 PYGR 135


>ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
           gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin
           TIAR-like [Cucumis sativus]
          Length = 174

 Score =  160 bits (405), Expect = 3e-37
 Identities = 81/127 (63%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
 Frame = +1

Query: 100 LRGMLYSTFTSGLPFAPPQVNQVNKEPPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVV 279
           L G L+S+ ++     PP      +   A+PS NLFVSGLSKRTTTE LH AFA+FGEV 
Sbjct: 47  LSGRLFSSASTSSFIPPPLPPSAQQREVAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVA 106

Query: 280 HARVVTDRNSGFSKGFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSDN 459
           HARVVTDR +G+SKGFGFV+YAT+EDA  GI+GMDG+FLDGWVIFAEYARPRP P  ++ 
Sbjct: 107 HARVVTDRVTGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPENNNG 166

Query: 460 --TYGRR 474
              YGRR
Sbjct: 167 FAPYGRR 173


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