BLASTX nr result
ID: Cnidium21_contig00004024
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00004024 (823 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max] 163 4e-38 ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium dist... 163 5e-38 ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [S... 161 1e-37 ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ... 161 2e-37 ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa... 160 3e-37 >ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max] Length = 145 Score = 163 bits (413), Expect = 4e-38 Identities = 81/117 (69%), Positives = 92/117 (78%), Gaps = 4/117 (3%) Frame = +1 Query: 136 LPFAPPQVNQVNKEPPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVVHARVVTDRNSGF 315 +P PP P A+P+PNLFVSGLSKRTTTE L FA+FGEVVHARVVTDR SG+ Sbjct: 29 VPTPPPGATPTPTRPTAEPNPNLFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGY 88 Query: 316 SKGFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSDNT----YGRR 474 SKGFGFV+YAT+E+A GI+GMDG+FLDGWVIFAEYARPRP PGQS N YGR+ Sbjct: 89 SKGFGFVQYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQSLNNNSPQYGRQ 145 >ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon] Length = 153 Score = 163 bits (412), Expect = 5e-38 Identities = 82/115 (71%), Positives = 90/115 (78%) Frame = +1 Query: 118 STFTSGLPFAPPQVNQVNKEPPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVVHARVVT 297 S FT P PP P ADPSPNLFVSGLSKRTTT+GL AFA+FGEV+HARVVT Sbjct: 30 SAFTPPSPPTPP--------PKADPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVT 81 Query: 298 DRNSGFSKGFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSDNT 462 DR +GFSKGFGFVRYA+VEDA GI+GMDG+FLDGWVIFAEYARPRP P + T Sbjct: 82 DRVTGFSKGFGFVRYASVEDASKGIEGMDGKFLDGWVIFAEYARPRPPPQMGEGT 136 >ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor] gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor] Length = 140 Score = 161 bits (408), Expect = 1e-37 Identities = 81/105 (77%), Positives = 88/105 (83%) Frame = +1 Query: 142 FAPPQVNQVNKEPPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVVHARVVTDRNSGFSK 321 FAPP+ P ADPSPNLFVSGLSKRTTTEGL AFA+FGEVVHARVVTDR SGFSK Sbjct: 19 FAPPKAPA--PRPQADPSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSK 76 Query: 322 GFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSD 456 GFGFVRYAT E+A GI+GMDG+FLDGWVIFAEYARPR P Q++ Sbjct: 77 GFGFVRYATTEEATKGIEGMDGKFLDGWVIFAEYARPRAPPEQAE 121 >ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera] gi|147854770|emb|CAN78606.1| hypothetical protein VITISV_024164 [Vitis vinifera] gi|302143178|emb|CBI20473.3| unnamed protein product [Vitis vinifera] Length = 135 Score = 161 bits (407), Expect = 2e-37 Identities = 83/124 (66%), Positives = 96/124 (77%), Gaps = 4/124 (3%) Frame = +1 Query: 112 LYSTFTSGLPFAPPQVNQVNKE-PPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVVHAR 288 L+ST T F PP + PPA+PS NLFVSGLSKRTT+EGLH AF++FG+VV+AR Sbjct: 16 LFSTST----FIPPPITAATPATPPAEPSTNLFVSGLSKRTTSEGLHEAFSKFGQVVNAR 71 Query: 289 VVTDRNSGFSKGFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSDN--- 459 VVTDR SG+SKGFGFVRY ++EDA GIKGMDG+FLDGWVIFAEYARPRP P +N Sbjct: 72 VVTDRVSGYSKGFGFVRYVSLEDAAEGIKGMDGKFLDGWVIFAEYARPRPPPSPQNNGAP 131 Query: 460 TYGR 471 YGR Sbjct: 132 PYGR 135 >ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus] gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus] Length = 174 Score = 160 bits (405), Expect = 3e-37 Identities = 81/127 (63%), Positives = 96/127 (75%), Gaps = 2/127 (1%) Frame = +1 Query: 100 LRGMLYSTFTSGLPFAPPQVNQVNKEPPADPSPNLFVSGLSKRTTTEGLHAAFAEFGEVV 279 L G L+S+ ++ PP + A+PS NLFVSGLSKRTTTE LH AFA+FGEV Sbjct: 47 LSGRLFSSASTSSFIPPPLPPSAQQREVAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVA 106 Query: 280 HARVVTDRNSGFSKGFGFVRYATVEDAQAGIKGMDGQFLDGWVIFAEYARPRPVPGQSDN 459 HARVVTDR +G+SKGFGFV+YAT+EDA GI+GMDG+FLDGWVIFAEYARPRP P ++ Sbjct: 107 HARVVTDRVTGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPENNNG 166 Query: 460 --TYGRR 474 YGRR Sbjct: 167 FAPYGRR 173