BLASTX nr result
ID: Cnidium21_contig00003980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00003980
(4224 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306571.1| methyl binding domain protein [Populus trich... 173 4e-40
ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248... 154 2e-34
emb|CBI19167.3| unnamed protein product [Vitis vinifera] 154 2e-34
ref|XP_002302301.1| methyl binding domain protein [Populus trich... 139 9e-30
ref|XP_002525855.1| hypothetical protein RCOM_0824380 [Ricinus c... 129 7e-27
>ref|XP_002306571.1| methyl binding domain protein [Populus trichocarpa]
gi|222856020|gb|EEE93567.1| methyl binding domain protein
[Populus trichocarpa]
Length = 1248
Score = 173 bits (438), Expect = 4e-40
Identities = 266/1100 (24%), Positives = 421/1100 (38%), Gaps = 121/1100 (11%)
Frame = -3
Query: 3283 ESDKEVLNSKGVMVDVVALAELEDPFGPEIRRRTEGMSTDAXXXXXXXXXXXXXXXXXXX 3104
+ + E+++ GV+VD VAL +EDP+G E+RRRTEGM A
Sbjct: 237 KEEMEMVSKNGVVVDFVALGNMEDPYGEELRRRTEGMQLKAEFLGFLEGFEGEWGSTRKK 296
Query: 3103 RKVVDASLFGDYLPKGWSLSISLKRKEKQVWLFCRRYISPSGRQFISCKEISSYLLSISG 2924
R++VDASLFGD LP GW LSI +K++ +VWL C RYISP+G QF+SCKE+SSYLLS SG
Sbjct: 297 RRIVDASLFGDALPIGWKLSICVKKQAGRVWLACTRYISPNGLQFVSCKEVSSYLLSFSG 356
Query: 2923 LQD--NEQLDSSHGACKMDSQNPAGVAV------QGNNTKDDSQFGNHLISDVAGAKEST 2768
L D D G K+ + + + + T D + N IS A ST
Sbjct: 357 LHDVRRSNFDHMDGRIKLTDKIATSIFLLTHVLQSADQTCKDGKNENDFISYKALPVTST 416
Query: 2767 LEHVQDNVVSSSVGGIPNEDPSA------EATITVD--------------KDTNQETFDT 2648
S+ GG P E + + T+T D + Q T
Sbjct: 417 ---------STETGGCPREFQTGMNYECHKCTLTFDGQDDLLQHLLSSHQRSPKQLKCGT 467
Query: 2647 NGNDKLDSGIDNSKPDASLRVEISSDKLSYDQQQEAYGN------PDMQASKIVLDRVET 2486
+ N+++ I N K + +++ ++ ++ GN + AS + + +
Sbjct: 468 STNEEVI--IKNGKYECQFCLKLFEERHHFNGH---LGNHIKDYLKKLDASSDITTQ-KN 521
Query: 2485 SDKQSMDCPSSSYQVDDVADL-ADKHSLDSNSCLGSEATLTRNGNDGIIATSDKRNEVQC 2309
+ S++ P S ++ D+ D + SN+ T+ + N +
Sbjct: 522 DEPASVEIPFGSVKIQTSIDIDRDSDEITSNT-----------------KTNGEINSIIP 564
Query: 2308 VSDALNTCSVEQEGGFQILAPPLIDDRSVPLASDVIGDSAVVKEPIREVVAGNLFYTENM 2129
+ SVE G Q DR+ +++D +G+ + ++VA +
Sbjct: 565 YCEMKANTSVEAYCGKQ--------DRASNISNDEVGE----MNEVTDIVAAEISVCSEP 612
Query: 2128 SSTSKANVLKLASRKFATVESISGSNTNHDAANKHCLTAVGQ-DFTVEGTASFPSRNEHF 1952
+ S N S TN K+C + D +V G RN
Sbjct: 613 ALLSNEN----------NAIHRSSDETN---VPKYCTNIIDDLDCSVAGDV----RNLAC 655
Query: 1951 SSIDNVRYGSLNSDLAKSEQKLCSDSSVLAPSGDEEIRIDNSVKSVSAFSVTPRRNMV-- 1778
+++ V + + Q SDS +LAP+ E + D+ ++ + S NMV
Sbjct: 656 INLNRVPPRLIE----ELNQGRGSDSGLLAPNAKENMFNDDIIEDRNCSSTID--NMVID 709
Query: 1777 ----PNCGRNERSSYAKTRTDVVDVLEDERKYGNFSMSSLSQRNQATVEVEPRQRVXXXX 1610
G S A +V L+++R S+ L N VE+ +
Sbjct: 710 DWDADGKGEPITGSCAAIAENVAANLKEQRSSEGCSVGLL---NSIAVEIMQEKSSKGDL 766
Query: 1609 XXXXSGNEKVCSAENLVDLLPARHVDTAEFNEVGTSRNDEIIFSSGRTYND--VGARMTS 1436
+ VC+ ++ ++F++VG +E+ S R N V +
Sbjct: 767 TGIENNMNSVCTG----------MLNESKFDDVGKPGTNELT-SVCRDNNTALVDDNVVI 815
Query: 1435 NKE-RXXXXXXXXXSGKAAIFGAEDNVTGVDSRSVEE-CRQQFSGSGLLTGS-------- 1286
N++ + + AE+N+TG ++ E C+++ S GLLT S
Sbjct: 816 NEQGKNHGGCPVIPFLNEQMHLAENNITGTPKCTIREPCQEEESEGGLLTISGNEQSFDL 875
Query: 1285 ---------------------CF------AEHPSNVYTVDQIYNRPVNELKF---NNGQT 1196
C +E +V TV I R N F NG T
Sbjct: 876 KGNVIKVSKGTINVVNHNEVLCLKNNEFGSEIDQSVQTVTNIQERSSNIFSFFPSTNGLT 935
Query: 1195 LGNQDLALAFGDPHAGLFADTTDLEHEKYPA--------------NCSAIPTRI------ 1076
++D + + TT E + A NC+ I
Sbjct: 936 FASKDEQSHDDENSMNQLSCTTSAEDKLQEAKTSCNGELCIAFGDNCTEQDADIVTGTVQ 995
Query: 1075 ---------EQNIDAQINVNRVNDNFVEE--QGISSFSDLFSLSCNGKLWGSEPNFNHAY 929
+ + A+ N + ++E Q + S + LS + + E N + A+
Sbjct: 996 EICFLFAGNQHTLTAKDNATGPFNGTMDELNQKMDSVESVLCLSGDAPMRSVEKNLHTAF 1055
Query: 928 NRR-WEVPEVNEVGTSKNKKYMVDFGGNNEQPGEN-VMPGGGMWRTGED-AFQSSMADLS 758
E P V SK DF G+ PG N + +WR E+ + AD
Sbjct: 1056 TGSIQEEPRVKNTENSKKDDLGHDFSGH---PGPNESVESEFVWRNEENGGLRCDFADTC 1112
Query: 757 HPPAQSPTSFCTFDILSEKAEDGLYRLGDKYDRESCFAELGSGRTEPVEFSFLTAPNSTS 578
P Q+ F +D +S+K E G+ Y S F L SG E +E++ LT+ S+
Sbjct: 1113 Q-PVQASGFFPLYDAVSDKGES--EHFGEAYGVISGFEGLKSGGMENMEYNLLTSQVSSH 1169
Query: 577 FQGVPVKNSYNPGMEQPFGSSYWINKHDL--VQNISSRSQVTSVCVWCRNEFLHEPVHPG 404
V S + + Q F SS + K DL + +SR V +VCVWC E E
Sbjct: 1170 SDESKVV-SCDAVIPQGFDSSVCLEKGDLPFLPKNASRHHVPAVCVWCGREICQEAFESE 1228
Query: 403 TQ-AAIGSMCPTCRTRISEQ 347
Q + +G MC C R S Q
Sbjct: 1229 AQTSTMGFMCAECAARFSGQ 1248
Score = 90.1 bits (222), Expect = 5e-15
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 10/130 (7%)
Frame = -3
Query: 4069 ESIPTVDLHLLSQSELYTLSLCSSSAFDPHHQND---VVIPKIDRTVFNESAGSRKQTYS 3899
ES+ +DL LSQ EL +LS CSSS+ Q D V PKIDR+VFNESAGSRKQT+S
Sbjct: 20 ESLLLIDLRHLSQPELLSLSFCSSSSSLHRLQTDTADVSTPKIDRSVFNESAGSRKQTFS 79
Query: 3898 RLRLAPASSSYASICRRTPHLRIPKPTSI-ETDPERAENSKIVAMLKALFS------KQT 3740
RLRLAP +++ +S TP + P I E P ENS+I+ +LK+LF +
Sbjct: 80 RLRLAPRNNNASSSSNSTPVV----PYQITERHPLDEENSQIIYLLKSLFGSDSHFIENN 135
Query: 3739 NRNGVTLASI 3710
N N L S+
Sbjct: 136 NENNHNLVSV 145
>ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248904 [Vitis vinifera]
Length = 947
Score = 154 bits (390), Expect = 2e-34
Identities = 78/154 (50%), Positives = 105/154 (68%), Gaps = 6/154 (3%)
Frame = -3
Query: 3268 VLNSKGVMVDVVALAELEDPFGPEIRRRTEGMSTDAXXXXXXXXXXXXXXXXXXXRKVVD 3089
++N+ GV+VDV ALA EDPFGPE+RRRTEG++T+ RK+V+
Sbjct: 186 IINNNGVVVDVAALANAEDPFGPELRRRTEGLTTEEELLGFLTGLSGQWGSRRKKRKIVE 245
Query: 3088 ASLFGDYLPKGWSLSISLKRKEKQVWLFCRRYISPSGRQFISCKEISSYLLSISGLQDNE 2909
AS FGD LP+GW L +S+KRKE +VWLFCRRYISP+G+QF+SCKE+SS LLS+SGLQD
Sbjct: 246 ASDFGDVLPQGWKLLLSMKRKEGRVWLFCRRYISPNGQQFVSCKEVSSCLLSLSGLQDAR 305
Query: 2908 QLDSSHG------ACKMDSQNPAGVAVQGNNTKD 2825
Q + H A ++ N AG+ ++ +N+KD
Sbjct: 306 QPNYGHNDENSQLAHQISPGNAAGLTLKDDNSKD 339
Score = 106 bits (265), Expect = 5e-20
Identities = 57/122 (46%), Positives = 76/122 (62%)
Frame = -3
Query: 4069 ESIPTVDLHLLSQSELYTLSLCSSSAFDPHHQNDVVIPKIDRTVFNESAGSRKQTYSRLR 3890
E++P +DL LSQSEL LSL SS + D +DVVIPKIDR++FNESAGSRKQTYSRLR
Sbjct: 15 EALPLIDLRFLSQSELQALSLTSSHSSDLRRCDDVVIPKIDRSIFNESAGSRKQTYSRLR 74
Query: 3889 LAPASSSYASICRRTPHLRIPKPTSIETDPERAENSKIVAMLKALFSKQTNRNGVTLASI 3710
LAP A+ R P +P EN+ I+ +LK LF+ +T+ + + +
Sbjct: 75 LAPRKPDIAATIPRRPRFSPHLNQKAALEPVDEENTLIIGLLKGLFATETHADDLIPVQV 134
Query: 3709 EH 3704
E+
Sbjct: 135 EY 136
>emb|CBI19167.3| unnamed protein product [Vitis vinifera]
Length = 1129
Score = 154 bits (390), Expect = 2e-34
Identities = 78/154 (50%), Positives = 105/154 (68%), Gaps = 6/154 (3%)
Frame = -3
Query: 3268 VLNSKGVMVDVVALAELEDPFGPEIRRRTEGMSTDAXXXXXXXXXXXXXXXXXXXRKVVD 3089
++N+ GV+VDV ALA EDPFGPE+RRRTEG++T+ RK+V+
Sbjct: 149 IINNNGVVVDVAALANAEDPFGPELRRRTEGLTTEEELLGFLTGLSGQWGSRRKKRKIVE 208
Query: 3088 ASLFGDYLPKGWSLSISLKRKEKQVWLFCRRYISPSGRQFISCKEISSYLLSISGLQDNE 2909
AS FGD LP+GW L +S+KRKE +VWLFCRRYISP+G+QF+SCKE+SS LLS+SGLQD
Sbjct: 209 ASDFGDVLPQGWKLLLSMKRKEGRVWLFCRRYISPNGQQFVSCKEVSSCLLSLSGLQDAR 268
Query: 2908 QLDSSHG------ACKMDSQNPAGVAVQGNNTKD 2825
Q + H A ++ N AG+ ++ +N+KD
Sbjct: 269 QPNYGHNDENSQLAHQISPGNAAGLTLKDDNSKD 302
Score = 146 bits (368), Expect = 5e-32
Identities = 108/352 (30%), Positives = 180/352 (51%), Gaps = 11/352 (3%)
Frame = -3
Query: 1363 NVTGVDSRSVEECRQQFSGSGLLTGSCFAEHPSNVYTVDQIYNR----PVNELKFNNGQT 1196
N T S + +++ S SG LT SC ++ V+ N+ +++LKF+
Sbjct: 791 NNTNWVSACTKPLQEKGSESGALTPSC----KEQIWGVENNGNKFSIGTMDKLKFDEINN 846
Query: 1195 LGNQDLALAFGD-PHAGLFADT-TDLEHEKYPANCSAIPTRIEQNIDAQINVNRVNDNFV 1022
N +L + G+ + G+ D T ++ ++ +I ++ EQ I A+ V ++ V
Sbjct: 847 SRNSELIITSGNMSNTGVGMDVVTSVQKQRGSEGYLSILSKNEQKIGAESPVTGFCNSAV 906
Query: 1021 EEQGISSFSDL-FSLSCNGKL-WGSEPNFNHAY-NRRWEVPEVNEVGTSKNKKYMVDFGG 851
E + S+ F + +G+ G + Y R WEVP + EV N + M+ FG
Sbjct: 907 AELKLGGHSESGFCIQSDGEQKCGIGNDLKRVYPGRFWEVPRLREVENPSNTELMIGFGS 966
Query: 850 NNEQPGENVMPGGGMWRTGED-AFQSSMADLSHPPAQSPTSFCTFDILSEKAEDGLYRLG 674
++ QPG++VM MWR+ E+ QS++ + S S + F TFD++S+K +GL
Sbjct: 967 SHAQPGQDVM-AEVMWRSDEENVLQSALGNSSSSMVLSSSCFPTFDVISDKGLNGLCTAN 1025
Query: 673 DKYDRESCFAELGSGRTEPVEFSFLTAPNSTSFQGVPVKNSYNPGMEQPFGSSYWINKHD 494
+K++ +S E ++FS LTA ++ + V SY+ GMEQ F SS W+ K
Sbjct: 1026 EKFNTDSI---------ENLKFSSLTAQRNSLSEDSKVL-SYDAGMEQGFNSSEWLEKET 1075
Query: 493 LVQNISSRSQVTSVCVWCRNEFLHEPVHPGTQ-AAIGSMCPTCRTRISEQVN 341
L+ ++ R V ++C+WCRNEF HE V TQ + G MCPTC+ + ++N
Sbjct: 1076 LLPKVAGRHLVAALCIWCRNEFHHENVGNATQTGSTGLMCPTCKVKFPGELN 1127
Score = 106 bits (265), Expect = 5e-20
Identities = 57/122 (46%), Positives = 76/122 (62%)
Frame = -3
Query: 4069 ESIPTVDLHLLSQSELYTLSLCSSSAFDPHHQNDVVIPKIDRTVFNESAGSRKQTYSRLR 3890
E++P +DL LSQSEL LSL SS + D +DVVIPKIDR++FNESAGSRKQTYSRLR
Sbjct: 17 EALPLIDLRFLSQSELQALSLTSSHSSDLRRCDDVVIPKIDRSIFNESAGSRKQTYSRLR 76
Query: 3889 LAPASSSYASICRRTPHLRIPKPTSIETDPERAENSKIVAMLKALFSKQTNRNGVTLASI 3710
LAP A+ R P +P EN+ I+ +LK LF+ +T+ + + +
Sbjct: 77 LAPRKPDIAATIPRRPRFSPHLNQKAALEPVDEENTLIIGLLKGLFATETHADDLIPVQV 136
Query: 3709 EH 3704
E+
Sbjct: 137 EY 138
>ref|XP_002302301.1| methyl binding domain protein [Populus trichocarpa]
gi|222844027|gb|EEE81574.1| methyl binding domain protein
[Populus trichocarpa]
Length = 1276
Score = 139 bits (349), Expect = 9e-30
Identities = 75/171 (43%), Positives = 104/171 (60%), Gaps = 4/171 (2%)
Frame = -3
Query: 3286 VESDKE----VLNSKGVMVDVVALAELEDPFGPEIRRRTEGMSTDAXXXXXXXXXXXXXX 3119
VES K+ ++N GV+VD AL +EDP+G E+RRRTEGM A
Sbjct: 233 VESKKKEEMVMVNKNGVVVDFGALGNMEDPYGEELRRRTEGMQLKAEFLGFLEGFEGEWG 292
Query: 3118 XXXXXRKVVDASLFGDYLPKGWSLSISLKRKEKQVWLFCRRYISPSGRQFISCKEISSYL 2939
R++VDASLFGD LP GW LSI +K++ +VWL C RYISP+G+QF+SCKE+SSYL
Sbjct: 293 SMRKKRRIVDASLFGDVLPIGWKLSICIKKQAGRVWLACTRYISPNGQQFVSCKEVSSYL 352
Query: 2938 LSISGLQDNEQLDSSHGACKMDSQNPAGVAVQGNNTKDDSQFGNHLISDVA 2786
LS SGL D +L+ H ++ + ++ ++T+ D + N IS +A
Sbjct: 353 LSFSGLHDVSRLNFGHMDGRIKLTDKISPSIPADHTRKDGKNENDFISYMA 403
Score = 98.2 bits (243), Expect = 2e-17
Identities = 58/115 (50%), Positives = 75/115 (65%), Gaps = 4/115 (3%)
Frame = -3
Query: 4069 ESIPTVDLHLLSQSELYTLSLCSSSAFDPHHQN----DVVIPKIDRTVFNESAGSRKQTY 3902
ES+P +DL LSQSEL +LS CSSS PH DV PKIDR+VFNESAGSRKQT+
Sbjct: 20 ESLPLIDLRHLSQSELLSLSFCSSS---PHRLRTDTADVSTPKIDRSVFNESAGSRKQTF 76
Query: 3901 SRLRLAPASSSYASICRRTPHLRIPKPTSIETDPERAENSKIVAMLKALFSKQTN 3737
SRLRLAP +++ + TP + + E P ENS+I+++LK+LF +N
Sbjct: 77 SRLRLAPRNNNASPSSNSTP---VVPFQNTERQPLDEENSQIISLLKSLFGSDSN 128
Score = 80.5 bits (197), Expect = 4e-12
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Frame = -3
Query: 1018 EQGISSFSDLFSLSCNGKLWGSEPNFNHAYNRRWEVPEVNEVGTSKNKKYMVDFGGNNEQ 839
+Q + S S + +W E N A+ V E V S+N + G +
Sbjct: 1049 KQKMDSVESAVCPSGSEPVWSVEKNLQTAFTG--SVQEEPRVENSENPRKDDSGIGFSSH 1106
Query: 838 PG--ENVMPGGGMWRTGEDA-FQSSMADLSHPPAQSPTSFCTFDILSEKAEDGLYRLGDK 668
PG E+ + MWR E++ S AD S P Q+ + F +D +S+K E L+ +K
Sbjct: 1107 PGPDESDVISEFMWRNDEESNLLSDFADTSCQPVQTSSFFPPYDAVSDKGESELF--AEK 1164
Query: 667 YDRESCFAELGSGRTEPVEFSFLTAPNSTSFQGVPVKNSYNPGMEQPFGSSYWINKHDL- 491
+ S F L G + +E + T+ S+ V +Y+ M + SS W+ K DL
Sbjct: 1165 FGATSGFEGLKLGGMDNMECNLPTSQVSSHSDESKV-GTYDAVMPKGITSSIWLAKEDLP 1223
Query: 490 -VQNISSRSQVTSVCVWCRNEFLHEPVH-PGTQAAIGSMCPTCRTRISEQVN 341
V SSR V +VCVWC E E + G + +G MC C ++S Q N
Sbjct: 1224 FVPKDSSRHHVPAVCVWCGREICQEALESEGQTSTMGFMCAECTAKLSGQFN 1275
>ref|XP_002525855.1| hypothetical protein RCOM_0824380 [Ricinus communis]
gi|223534860|gb|EEF36549.1| hypothetical protein
RCOM_0824380 [Ricinus communis]
Length = 697
Score = 129 bits (324), Expect = 7e-27
Identities = 66/156 (42%), Positives = 97/156 (62%)
Frame = -3
Query: 3283 ESDKEVLNSKGVMVDVVALAELEDPFGPEIRRRTEGMSTDAXXXXXXXXXXXXXXXXXXX 3104
E ++E++N GV++D+V LA LEDP+ E++RRTEGM +
Sbjct: 171 EREREIVNKNGVVIDLVKLASLEDPYREELKRRTEGMVKEEELLGFFRDLGGQWCSRRRK 230
Query: 3103 RKVVDASLFGDYLPKGWSLSISLKRKEKQVWLFCRRYISPSGRQFISCKEISSYLLSISG 2924
RK+VDAS FGD+LP GW L + LKRKE + W++CRRYISPSG+QFISCKE+S+YL S
Sbjct: 231 RKIVDASEFGDFLPFGWKLLLGLKRKEGKAWVYCRRYISPSGQQFISCKEVSAYLQSCLK 290
Query: 2923 LQDNEQLDSSHGACKMDSQNPAGVAVQGNNTKDDSQ 2816
D+ ++ ++ S+N AG + + + + S+
Sbjct: 291 PYDHSN-GNNRQVHRVASENHAGTSGREEDQRQPSE 325
Score = 81.6 bits (200), Expect = 2e-12
Identities = 55/137 (40%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Frame = -3
Query: 4099 AAVTDRPLPPESIPTVDLHLLSQSELYTLSLCSSSAFDPHHQNDVVIP-KIDRTVFNESA 3923
A T +P PP +P VD+ L+QSEL+ LSL SSS+ +P++ N + P IDRT+FNESA
Sbjct: 2 ATSTAQP-PPLYLPFVDMTTLTQSELHALSLFSSSSLNPNNINIITPPITIDRTLFNESA 60
Query: 3922 GSRKQTYSRLRLAPASSSYASICRRTPHLRIPKPTSIETDPERAENSKIVAMLKALFSKQ 3743
GSR+QTYSR A + +T + P S D +R EN I+ LK L S
Sbjct: 61 GSRRQTYSRPSSHHHRHRLAGLLPKTT-TQNPNFPSENPDTDRIENHAIIKFLKQLLSSH 119
Query: 3742 TNRNGVTLASIEHTPHI 3692
N + L + H+
Sbjct: 120 PEFNQLDLIDFDSFTHL 136