BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003973
         (3453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza...  1025   0.0  
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...  1023   0.0  
gb|ABA95236.1| AT hook motif-containing protein, putative, expre...  1022   0.0  
gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]       1021   0.0  
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...  1019   0.0  

>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
            Group]
          Length = 1682

 Score = 1025 bits (2651), Expect = 0.0
 Identities = 527/1148 (45%), Positives = 726/1148 (63%), Gaps = 4/1148 (0%)
 Frame = +3

Query: 3    GGPSVKCPHCEAFMWKEERANKSVTKGSPAFSICYKKGQIRLPKNPKTPSYLWQLY--ND 176
            G P+  C HC A  W EER  +   KG P+FS+C K+G++ LP   K P+YL  L     
Sbjct: 286  GKPTCTCQHCGALFWYEERT-RGKGKGPPSFSLCCKQGKVDLPTLKKPPTYLSNLMCKEK 344

Query: 177  PVKGKHFKKCSRIYNSMFVFTSTGGKVDHSINNGGGPYVYRLNGQNHHVFGSLIPDDGQS 356
              + +++    R+YNSMF FTS GGKVD  INNG GPYV+R+NGQN+H  G+L+P++G  
Sbjct: 345  GKRSRNYMDNIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRIGTLLPEEGDK 404

Query: 357  PKFCQLYIYDTENEVSNRMQW-IDLNDGGKLDPEIVQNLIKMFDEKNELVKRFRMARDRF 533
            P++ QLYIYDTENEV NR+      ++   +D  IV  L  M D +N L + FR+ARDRF
Sbjct: 405  PRWAQLYIYDTENEVKNRIDASTSSHNRESIDSHIVLGLKNMLDRENVLAQTFRIARDRF 464

Query: 534  KDSGIVDLEIILKVCRSESGRENNIGPSNEVAGIMVGELEETEECRDIIIQAKGGGFERV 713
            K+    ++ + L   R   GR++N+  ++EVA ++V +  E ++ RDII+  K  G  R+
Sbjct: 465  KEGDYHNVSLRLIRKRGGDGRQHNMPSASEVAALIVNDTSENQKGRDIIVHYKDTGPRRI 524

Query: 714  TNVHPKLMALQYPVLFPNGEDGYHKDIEYAETVENRGKTRHKCSMKDFYSYRLHVRHNQG 893
            +  HPK MA+QYP+LFP GEDG+   I Y +   ++ K +H  +M ++Y+YR+  R NQ 
Sbjct: 525  SENHPKFMAMQYPLLFPYGEDGFTNKILYRDNHGSKCKRKH-LTMLEYYAYRIQQRKNQC 583

Query: 894  MSPRIGGRLFQQYVVDAFSTIEQARLWWFRTHQTTLRNELYNHICDVLRQGDGDTENVGK 1073
            M   +  +L  Q++VDA + I Q RL W R HQ  LR ELY  + D + +GD   E VGK
Sbjct: 584  MHLLMCEKLTLQFIVDALACIIQYRLDWIRKHQGNLRTELYAGLQDAIERGDTRAEQVGK 643

Query: 1074 SVILPAGFVGSKRYMQQNFQDALAVCRYVGHPDIFLTMTCNAMCDEILQMMKLIPNGNPH 1253
             ++LP+ F GS RY  QN+QDA+A+CR+ G+PD+F+T TCNA   EI  M+  I    P 
Sbjct: 644  RILLPSSFTGSPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNMLDEIGVQKPS 703

Query: 1254 DSPDIVARVFHLKLQQLVDDIKKKSYFGTCLGVMYVIEFQKRGLPHVHMLIWLDSVSKKK 1433
            D PDIV RVFH+KL++L+ DIK K YFG  L ++Y IEFQKRGLPH H+LI+LD   K  
Sbjct: 704  DRPDIVDRVFHIKLRELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHILIFLDKKDKCP 763

Query: 1434 LKENVDNFVSAEIPDPVLDPVGYEAVKTFMMHGPCGADNMKSPCMKDFRCSRHFPKKYCS 1613
                +D  +SAEIPD   D  G+EAV+ FMMHGPCG +   SPCM + +C R+FPKK+ S
Sbjct: 764  DASEIDRIISAEIPDKEEDREGFEAVENFMMHGPCGEEKSNSPCMIENKCIRNFPKKFHS 823

Query: 1614 RTMFDECGFPIYKRRKTDVIVKVRNKELDNQYVVPYNRDLLVKYQCHMNVEVCCHARSLK 1793
             T  DE GFP Y+RR     ++  N +LDN+YVVPYNRDLLVKYQ H+NVE C  ++S+K
Sbjct: 824  ETTVDEDGFPTYRRRDNGRYIEKGNVKLDNRYVVPYNRDLLVKYQAHINVERCNRSKSIK 883

Query: 1794 YLFKYCLKGHDRATVEVRSQRNNPVTTTIESLDEIQCFFDGRYICAAEAAYLIFGFEVHH 1973
            YLFKY  KG D+AT  + S             DEI+ + +  YI   +A + IF FE+H+
Sbjct: 884  YLFKYMHKGDDQATALIESDH-----------DEIKKYLECTYISGHDACWRIFQFEMHY 932

Query: 1974 RSISVERLSYHLPGSKNCTFRSNEPLHKVVNREKNRPSKLEAFFHLNSTDQNARKYTYDE 2153
            R  SVERL +HL   +   F  +  L K+V +E+   +K   +   N  +  AR +TY E
Sbjct: 933  RYPSVERLPFHLENEQQVIFPDSADLRKIVRKERIGVTKFTQWMETNKINDEARDFTYAE 992

Query: 2154 IPKYYVWNGQEGIWSVRKRGLHIGRLTYTHHSSGELWYLRMLLTKIPGPTSFEDIRTVNN 2333
             P  +VW  +   W+ RK+G  IGR+ Y H +SG+ +YLRMLL  + GP +FE+IRTV+ 
Sbjct: 993  FPSKWVWKNKLKQWNKRKKGKMIGRIYYAHPASGDKYYLRMLLNTVKGPRTFEEIRTVDG 1052

Query: 2334 ILHSTFQDACSALGLLDDDKEWHQVITDCSNCGFAGQIRQLFVHIMVNCQVGDLRTLWIT 2513
            ++H +F+ AC ALG LDDD+EW + I + SN     Q+R LF  I+ +C+V D + +W +
Sbjct: 1053 VVHPSFKSACEALGFLDDDREWVECIREASNYASGNQLRHLFTTILCHCEVTDPKRIWES 1112

Query: 2514 HWKEMSDDILYMHRQIKNNADLILNEEQIQFFALAEINTLLRSIGKCLKDYPQLPQPPSN 2693
             W+++ +DI Y  R+  N   L L E+Q +  AL EI  L+R  GK L++YP +  P   
Sbjct: 1113 CWEDLGEDIEYKQRKNLNYPTLRLTEQQKKGHALIEIEKLMRQAGKTLEEYPDIELPKCA 1172

Query: 2694 YLCHGLNNLILDETSYDRKAMESEYNILFNNCNEEQKDIYHAVMQSIENQEGGIFFAYGS 2873
             L    N L+ +E SYD+   + E++ +F   N EQK  + ++++S     G + F  G 
Sbjct: 1173 ELRELGNRLLNEEMSYDKDKQKEEHDSIFGKLNAEQKVAFDSIIESTNKGLGKLMFVDGY 1232

Query: 2874 GGCGKTYLWRTIICKLRSEGKIVLPVASSGIAATLLPGGRTAHSRFKIPINLDEYSFCNI 3053
            GG GKTYLWR I  KLRSEGKIVL VAS GIAA LL GGRTAHSRF IP+ + E S C+I
Sbjct: 1233 GGTGKTYLWRAITTKLRSEGKIVLTVASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDI 1292

Query: 3054 GHNSDIAHLIRNTSLIIWDEAPMQHRYAFECLDRSLRDLMKSVDLKYYHMPFGGITILFG 3233
               S +A L++ TSLI+WDEAPM +R  FE LDRSLRD+++S        PFGG+T++ G
Sbjct: 1293 KQGSHLAELLKKTSLILWDEAPMANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLG 1352

Query: 3234 GDFRQILPVINYGSRSDIVAACITRSKLWNLCKVFILKQNMRLN-TAKGAVENELLKDFA 3410
            GDFRQILPV+  G R+ IV A I RS LW    +F L +NMRL+  ++   E +   DFA
Sbjct: 1353 GDFRQILPVVRKGRRTQIVNASIKRSYLWQHFHIFKLTRNMRLSCISRDEDEQKRTADFA 1412

Query: 3411 KWVLDIGN 3434
            +W+++IG+
Sbjct: 1413 QWIVNIGD 1420


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score = 1023 bits (2644), Expect = 0.0
 Identities = 522/1156 (45%), Positives = 732/1156 (63%), Gaps = 12/1156 (1%)
 Frame = +3

Query: 3    GGPSVKCPHCEAFMWKEERANKSVTKGSPAFSICYKKGQIRLPKNPKTPSYLWQL--YND 176
            G P+ +C  C + MW  ERA+K     +P FS+C  KG + L    + P YL +L  Y  
Sbjct: 4    GHPNFECEKCGSTMWYNERADKPRRPRNPTFSLCCLKGDVSLEFLEQPPDYLKELLAYKG 63

Query: 177  PVKGKHFKKCSRIYNSMFVFTSTGGKVDHSINNGGGPYVYRLNGQNHHVFGSLIPDDGQS 356
                  F++  R YNS+F FTS G K+D+++N   GPYVY+++GQN+H  G LIP  G+ 
Sbjct: 64   GRHSVKFREKIRAYNSIFAFTSMGAKIDNTVNLRPGPYVYKISGQNYHRIGGLIPGQGKQ 123

Query: 357  PKFCQLYIYDTENEVSNRMQWIDLNDGGK----LDPEIVQNLIKMFDEKNELVKRFRMAR 524
            PKF QLY++DTENE+ NR+  ++   GGK    LD +IV+ L  M D  N + K FRMAR
Sbjct: 124  PKFSQLYVHDTENEIQNRLSSLN---GGKTARDLDADIVRRLKDMLDMNNSVAKLFRMAR 180

Query: 525  DRFKDSGIVDLEIILKVCRSESGRENNIGPSNEVAGIMVGELEETEECRDIIIQAKGGGF 704
            DR       ++ I L   RS   R+     + E+AG++VG+  E+   RDI+I+ K  G 
Sbjct: 181  DRLSAPDNKEVRIRLIGTRSNDSRQYTTPTATEIAGLIVGDFGESNGRRDIVIEHKTDGL 240

Query: 705  ERVTNVHPKLMALQYPVLFPNGEDGYHKDIEYAETVENRGKT--RHKCSMKDFYSYRLHV 878
            +R+   HPK MA+QYP+LFP  EDG+H DI Y++    R K   R K +++++Y+YR+  
Sbjct: 241  QRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVTLREYYAYRIQQ 300

Query: 879  RHNQGMSPRIGGRLFQQYVVDAFSTIEQARLWWFRTHQTTLRNELYNHICDVLRQGDGDT 1058
            R  +  +  IGGRLFQQYVVDAF+ IE+ RL W R +QT LR +LY ++CD + +GD   
Sbjct: 301  RPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCDAVVRGDTIA 360

Query: 1059 ENVGKSVILPAGFVGSKRYMQQNFQDALAVCRYVGHPDIFLTMTCNAMCDEILQMMKLIP 1238
               GK ++LP+ F G  RYM QN+QDA+A+CR  G+PDIF+T T N    EI  M++ IP
Sbjct: 361  AATGKRIVLPSSFTGGPRYMVQNYQDAMAICRTFGNPDIFMTFTANPKWPEIQYMLQKIP 420

Query: 1239 NGNPHDSPDIVARVFHLKLQQLVDDIKKKSYFGTCLGVMYVIEFQKRGLPHVHMLIWLDS 1418
              +  D PDI  RVF +KL QL+  I +  YFG  +  +Y IEFQKRGLPH H+L+WL  
Sbjct: 421  GQSVDDRPDIKTRVFKMKLDQLMKHIVEGQYFGKIISAIYTIEFQKRGLPHAHILLWLHP 480

Query: 1419 VSKKKLKENVDNFVSAEIPDPVLDPVGYEAVKTFMMHGPCGADNMKSPCMKDFRCSRHFP 1598
             +K    E++D  ++AE+P    DP  + AVK FM+HGPCG  N+ +PCM D  CSR FP
Sbjct: 481  SNKYPTPEDIDKIITAEMPSKEDDPECFNAVKQFMLHGPCGDANINAPCMIDGICSRKFP 540

Query: 1599 KKYCSRTMFDECGFPIYKRRKTDVIVKVRNKELDNQYVVPYNRDLLVKYQCHMNVEVCCH 1778
            K +   T  D  GFP Y+RR     VK  +  LDN+YVVPYNR LL+ +Q H+NVE C  
Sbjct: 541  KSFFDETTIDRDGFPTYRRRDDGRHVKKGDINLDNRYVVPYNRGLLLAFQAHLNVEWCNK 600

Query: 1779 ARSLKYLFKYCLKGHDRATVEVRSQ---RNNPVTTTIESLDEIQCFFDGRYICAAEAAYL 1949
            +R++KYLFKY  KG DRA + +        +   T I  +DE++ F D RY+ A EA + 
Sbjct: 601  SRAIKYLFKYLHKGPDRAIMVIEDNVLGNRSTNATHITMVDEVKTFLDCRYVSACEACWR 660

Query: 1950 IFGFEVHHRSISVERLSYHLPGSKNCTFRSNEPLHKVVNREKNRPSKLEAFFHLNSTDQN 2129
            IF F++H+R+ +V RLS+HLP   + T R +E L  V+++E    +    +  +NS    
Sbjct: 661  IFNFDIHYRNPAVMRLSFHLPEEHSITLRDSEQLSDVISKEGVEHTMFTEWMLMNSMSSE 720

Query: 2130 ARKYTYDEIPKYYVWNGQEGIWSVRKRGLHIGRLTYTHHSSGELWYLRMLLTKIPGPTSF 2309
            AR  TY E PK +VW+  +  W  RK G  IGR+ Y H +SGE +YLR+LL  + GPTS+
Sbjct: 721  ARTLTYSEFPKKFVWDETKKKWKKRKAGRTIGRIYYAHPTSGEKYYLRILLNIVHGPTSY 780

Query: 2310 EDIRTVNNILHSTFQDACSALGLLDDDKEWHQVITDCSNCGFAGQIRQLFVHIMVNCQVG 2489
            E+I+TV  + + TF++ C+ALGLL+D++EW+  + + S      Q+R+LFV I++  +V 
Sbjct: 781  EEIKTVGGVTYQTFKETCNALGLLNDNREWNDALNEASQWATGTQLRELFVTILLYGEVA 840

Query: 2490 DLRTLWITHWKEMSDDILYMHRQIKNNADLILNEEQIQFFALAEINTLLRSIGKCLKDYP 2669
            D+  LW T+WK +SDDI+Y  R +  ++ L LN+EQIQ + L EI+ +L   G  L D+ 
Sbjct: 841  DIGKLWETNWKTLSDDIVYKKRILFQHSRLELNDEQIQSYCLIEIDKILVRAGSYLSDFD 900

Query: 2670 QLPQPPSNYLCHGLNNLILDETSYDRKAMESEYNILFNNCNEEQKDIYHAVMQSIENQEG 2849
             +P P S       N LI++E SY+   ++ E+       NE+Q DIY+ V+ ++    G
Sbjct: 901  GMPLPNSESFEATENRLIVEELSYNVDDLKKEHERCHPLLNEQQIDIYNNVINAVNTNIG 960

Query: 2850 GIFFAYGSGGCGKTYLWRTIICKLRSEGKIVLPVASSGIAATLLPGGRTAHSRFKIPINL 3029
            G++F YG GG GKT+L+RTII KLRSE KIVL VASSGIA+ LLPGGRTAHSRFKIP+ +
Sbjct: 961  GLYFVYGHGGTGKTFLYRTIIAKLRSEKKIVLAVASSGIASLLLPGGRTAHSRFKIPLEI 1020

Query: 3030 DEYSFCNIGHNSDIAHLIRNTSLIIWDEAPMQHRYAFECLDRSLRDLMKSVDLKYYHMPF 3209
             E S C+I  N+ +A L+  T LIIWDEAPM  RYAFE LDR+L+D++          PF
Sbjct: 1021 YEDSTCSINQNTHLADLMVQTDLIIWDEAPMTQRYAFEALDRTLKDIIGFKFPDRAEQPF 1080

Query: 3210 GGITILFGGDFRQILPVINYGSRSDIVAACITRSKLWNLCKVFILKQNMRL-NTAKGAVE 3386
            GG+T+L GGDFRQILPVI  G   DI+ +CI +S LW+ C +F L ++MR+ NT     E
Sbjct: 1081 GGMTVLLGGDFRQILPVIPKGRIHDIIQSCINKSFLWDYCTIFSLSKSMRVRNTTSTGKE 1140

Query: 3387 NELLKDFAKWVLDIGN 3434
            ++++++F KW+L +G+
Sbjct: 1141 HDVIREFNKWLLQLGD 1156


>gb|ABA95236.1| AT hook motif-containing protein, putative, expressed [Oryza sativa
            Japonica Group]
          Length = 1682

 Score = 1022 bits (2643), Expect = 0.0
 Identities = 527/1148 (45%), Positives = 723/1148 (62%), Gaps = 4/1148 (0%)
 Frame = +3

Query: 3    GGPSVKCPHCEAFMWKEERANKSVTKGSPAFSICYKKGQIRLPKNPKTPSYLWQLY--ND 176
            G P+  C HC A  W EER  +   KG P+FS+C K+G++ LP   K P+YL  L     
Sbjct: 286  GKPTCTCQHCGALFWYEERT-RGKGKGPPSFSLCCKQGKVDLPTLKKPPTYLSNLMCKEK 344

Query: 177  PVKGKHFKKCSRIYNSMFVFTSTGGKVDHSINNGGGPYVYRLNGQNHHVFGSLIPDDGQS 356
              + +++    R+YNSMF FTS GGKVD  INNG GPYV+R+NGQN+H  G+L+P++G  
Sbjct: 345  GKRSRNYMDNIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRIGTLLPEEGDK 404

Query: 357  PKFCQLYIYDTENEVSNRMQW-IDLNDGGKLDPEIVQNLIKMFDEKNELVKRFRMARDRF 533
            P++ QLYIYDTENEV NR+      ++   +D  IV  L  M D +N L + FRMARDRF
Sbjct: 405  PRWAQLYIYDTENEVKNRIDASTSSHNRESIDSHIVLGLKNMLDRENVLAQTFRMARDRF 464

Query: 534  KDSGIVDLEIILKVCRSESGRENNIGPSNEVAGIMVGELEETEECRDIIIQAKGGGFERV 713
            K+    ++ + L   R   GR++N+  ++EVA ++V +  E ++ RDII+  K  G  R+
Sbjct: 465  KEGDYHNVSLRLIRKRGGDGRQHNMPSASEVAALIVNDTSENQKGRDIIVHYKDTGPRRI 524

Query: 714  TNVHPKLMALQYPVLFPNGEDGYHKDIEYAETVENRGKTRHKCSMKDFYSYRLHVRHNQG 893
            +  HPK M +QYP+LFP GEDG+   I Y +   ++ K +H  +M ++Y+YR+  R NQ 
Sbjct: 525  SENHPKFMPMQYPLLFPYGEDGFTNKILYRDNHGSKCKRKH-LTMLEYYAYRIQQRKNQC 583

Query: 894  MSPRIGGRLFQQYVVDAFSTIEQARLWWFRTHQTTLRNELYNHICDVLRQGDGDTENVGK 1073
            M   +  +L  Q++VDA + I Q RL W R HQ  LR ELY  + D + +GD   E VGK
Sbjct: 584  MHLLMCEKLTLQFIVDALACIIQYRLDWIRKHQGNLRTELYAGLQDAIERGDTRAEQVGK 643

Query: 1074 SVILPAGFVGSKRYMQQNFQDALAVCRYVGHPDIFLTMTCNAMCDEILQMMKLIPNGNPH 1253
             ++LP+ F GS RY  QN+QDA+A+CR+ G+PD+F+T TCNA   EI  M+  I    P 
Sbjct: 644  RILLPSSFTGSPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNMLDEIGVQKPS 703

Query: 1254 DSPDIVARVFHLKLQQLVDDIKKKSYFGTCLGVMYVIEFQKRGLPHVHMLIWLDSVSKKK 1433
            D PDIV RVFH+KL++L+ DIK K YFG  L ++Y IEFQKRGLPH H+LI+LD   K  
Sbjct: 704  DRPDIVDRVFHIKLRELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHILIFLDKKDKCP 763

Query: 1434 LKENVDNFVSAEIPDPVLDPVGYEAVKTFMMHGPCGADNMKSPCMKDFRCSRHFPKKYCS 1613
                +D  +SAEIPD   D  G+EAV+ FMMHGPCG     SPCM + +C R+FPKK+ S
Sbjct: 764  DASEIDRIISAEIPDKEEDREGFEAVENFMMHGPCGEAKSNSPCMIENKCIRNFPKKFHS 823

Query: 1614 RTMFDECGFPIYKRRKTDVIVKVRNKELDNQYVVPYNRDLLVKYQCHMNVEVCCHARSLK 1793
             T  DE GFP Y+RR     ++  N +LDN+YVVPYNRDLLVKYQ H+NVE C  ++S+K
Sbjct: 824  ETTVDEDGFPTYRRRDNGRYIEKGNVKLDNRYVVPYNRDLLVKYQAHINVERCNRSKSIK 883

Query: 1794 YLFKYCLKGHDRATVEVRSQRNNPVTTTIESLDEIQCFFDGRYICAAEAAYLIFGFEVHH 1973
            YLFKY  KG D+AT  + S             DEI+ + +  YI   +A + IF FE+H+
Sbjct: 884  YLFKYMHKGDDQATALIESDH-----------DEIKKYLECTYISGHDACWRIFQFEMHY 932

Query: 1974 RSISVERLSYHLPGSKNCTFRSNEPLHKVVNREKNRPSKLEAFFHLNSTDQNARKYTYDE 2153
            R  SVERL +HL   +   F  +  L K+V +E+   +K   +   N  +  AR +TY E
Sbjct: 933  RYPSVERLPFHLENEQQVIFPDSADLRKIVRKERIGVTKFTQWMETNKINDEARDFTYAE 992

Query: 2154 IPKYYVWNGQEGIWSVRKRGLHIGRLTYTHHSSGELWYLRMLLTKIPGPTSFEDIRTVNN 2333
             P  +VW  +   W+ RK+G  IGR+ Y H +SG+ +YLRMLL  + GP +FE+IRTV+ 
Sbjct: 993  FPSKWVWKNKLKQWNKRKKGKMIGRIYYAHPASGDKYYLRMLLNTVKGPRTFEEIRTVDG 1052

Query: 2334 ILHSTFQDACSALGLLDDDKEWHQVITDCSNCGFAGQIRQLFVHIMVNCQVGDLRTLWIT 2513
            ++H +F+ AC ALG LDDD+EW + I + SN     Q+R LF  I+ +C+V D + +W +
Sbjct: 1053 VVHPSFKSACEALGFLDDDREWVECIREASNYASGNQLRHLFTTILCHCEVTDPKRIWES 1112

Query: 2514 HWKEMSDDILYMHRQIKNNADLILNEEQIQFFALAEINTLLRSIGKCLKDYPQLPQPPSN 2693
             W+++ +DI Y  R+  N   L L E+Q +  AL EI  L+R  GK L++YP +  P   
Sbjct: 1113 CWEDLGEDIEYKQRKNLNYPTLRLTEQQKKGHALIEIEKLMRQAGKTLEEYPDIELPKCA 1172

Query: 2694 YLCHGLNNLILDETSYDRKAMESEYNILFNNCNEEQKDIYHAVMQSIENQEGGIFFAYGS 2873
             L    N L+ +E SYD+   + E++ +F   N EQK  + ++++S     G + F  G 
Sbjct: 1173 ELRELGNRLLNEEMSYDKDKQKEEHDSIFGKLNAEQKVAFDSIIESTNKGLGKLMFVDGY 1232

Query: 2874 GGCGKTYLWRTIICKLRSEGKIVLPVASSGIAATLLPGGRTAHSRFKIPINLDEYSFCNI 3053
            GG GKTYLWR I  KLRSEGKIVL VAS GIAA LL GGRTAHSRF IP+ + E S C+I
Sbjct: 1233 GGTGKTYLWRAITTKLRSEGKIVLTVASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDI 1292

Query: 3054 GHNSDIAHLIRNTSLIIWDEAPMQHRYAFECLDRSLRDLMKSVDLKYYHMPFGGITILFG 3233
               S +A L++ TSLI+WDEAPM +R  FE LDRSLRD+++S        PFGG+T++ G
Sbjct: 1293 KQGSHLAELLKKTSLILWDEAPMANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLG 1352

Query: 3234 GDFRQILPVINYGSRSDIVAACITRSKLWNLCKVFILKQNMRLN-TAKGAVENELLKDFA 3410
            GDFRQILPV+  G R+ IV A I RS LW    +  L +NMRL+  ++   E +   DFA
Sbjct: 1353 GDFRQILPVVRKGRRTQIVNASIKRSYLWQHFHILKLTRNMRLSCISRDEDEQKRTADFA 1412

Query: 3411 KWVLDIGN 3434
            +W+L+IG+
Sbjct: 1413 QWILNIGD 1420


>gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]
          Length = 1634

 Score = 1021 bits (2641), Expect = 0.0
 Identities = 527/1148 (45%), Positives = 723/1148 (62%), Gaps = 4/1148 (0%)
 Frame = +3

Query: 3    GGPSVKCPHCEAFMWKEERANKSVTKGSPAFSICYKKGQIRLPKNPKTPSYLWQLY--ND 176
            G P+  C HC A  W EER  +   KG P+FS+C K+G++ LP   K P+YL  L     
Sbjct: 238  GKPTCTCQHCGALFWYEERT-RGKGKGPPSFSLCCKQGKVDLPTLKKPPTYLSNLMCKEK 296

Query: 177  PVKGKHFKKCSRIYNSMFVFTSTGGKVDHSINNGGGPYVYRLNGQNHHVFGSLIPDDGQS 356
              + +++    R+YNSMF FTS GGKVD  INNG GPYV+R+NGQN+H   +L+P++G  
Sbjct: 297  GKRSRNYMDNIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRISTLLPEEGDK 356

Query: 357  PKFCQLYIYDTENEVSNRMQW-IDLNDGGKLDPEIVQNLIKMFDEKNELVKRFRMARDRF 533
            P++ QLYIYDTENEV NR+      ++   +D  IV  L  M D +N L + FRMARDRF
Sbjct: 357  PRWAQLYIYDTENEVKNRIDASTSSHNRESIDSHIVLGLKNMLDRENVLAQTFRMARDRF 416

Query: 534  KDSGIVDLEIILKVCRSESGRENNIGPSNEVAGIMVGELEETEECRDIIIQAKGGGFERV 713
            K+    ++ + L   R   GR++N+  ++EVA ++V +  E ++ RDII+  K  G  R+
Sbjct: 417  KEGDYHNVSLRLIRKRGGDGRQHNMPSASEVAALIVNDTSENQKGRDIIVHYKDTGPRRI 476

Query: 714  TNVHPKLMALQYPVLFPNGEDGYHKDIEYAETVENRGKTRHKCSMKDFYSYRLHVRHNQG 893
            +  HPK MA+QYP+LFP GEDG+   I Y +   ++ K +H  +M ++Y+YR+  R NQ 
Sbjct: 477  SENHPKFMAMQYPLLFPYGEDGFTNKILYRDNHGSKCKRKH-LTMLEYYAYRIQQRKNQC 535

Query: 894  MSPRIGGRLFQQYVVDAFSTIEQARLWWFRTHQTTLRNELYNHICDVLRQGDGDTENVGK 1073
            M   +  +L  Q++VDA + I Q RL W R HQ  LR ELY  + D + +GD   + VGK
Sbjct: 536  MHLLMCEKLTLQFIVDALACIIQYRLDWIRKHQGNLRTELYAGLQDAIERGDTRADQVGK 595

Query: 1074 SVILPAGFVGSKRYMQQNFQDALAVCRYVGHPDIFLTMTCNAMCDEILQMMKLIPNGNPH 1253
             ++LP+ F G  RY  QN+QDA+A+CR+ G+PD+F+T TCNA   EI  M+  I    P 
Sbjct: 596  RILLPSSFTGGPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNMLDEIGVQKPS 655

Query: 1254 DSPDIVARVFHLKLQQLVDDIKKKSYFGTCLGVMYVIEFQKRGLPHVHMLIWLDSVSKKK 1433
            D PDIV RVFH+KL++L+ DIK K YFG  L ++Y IEFQKRGLPH H+LI+LD   K  
Sbjct: 656  DRPDIVDRVFHIKLRELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHILIFLDKKDKCP 715

Query: 1434 LKENVDNFVSAEIPDPVLDPVGYEAVKTFMMHGPCGADNMKSPCMKDFRCSRHFPKKYCS 1613
                +D  +SAEIPD   D  G+EAV+ FMMHGPCG     SPCM + +C R+FPKK+ S
Sbjct: 716  DASEIDRIISAEIPDKEEDREGFEAVENFMMHGPCGEAKSNSPCMIENKCIRNFPKKFHS 775

Query: 1614 RTMFDECGFPIYKRRKTDVIVKVRNKELDNQYVVPYNRDLLVKYQCHMNVEVCCHARSLK 1793
             T  DE GFP Y+RR     ++  N +LDN+YVVPYNRDLLVKYQ H+NVE C  ++S+K
Sbjct: 776  ETTVDEDGFPTYRRRDNGRYIEKGNVKLDNRYVVPYNRDLLVKYQAHINVERCNRSKSIK 835

Query: 1794 YLFKYCLKGHDRATVEVRSQRNNPVTTTIESLDEIQCFFDGRYICAAEAAYLIFGFEVHH 1973
            YLFKY  KG D+AT  + S             DEI+ + +  YI   +A + IF FE+H+
Sbjct: 836  YLFKYMHKGDDQATALIESDH-----------DEIKKYLECTYISGHDACWRIFQFEMHY 884

Query: 1974 RSISVERLSYHLPGSKNCTFRSNEPLHKVVNREKNRPSKLEAFFHLNSTDQNARKYTYDE 2153
            R  SVERL +HL   +   F  +  L K+V +E+   +K   +   N  +  AR  TY E
Sbjct: 885  RYPSVERLPFHLENEQQVIFPDSADLRKIVRKERIGVTKFTQWMETNKINDEARDLTYAE 944

Query: 2154 IPKYYVWNGQEGIWSVRKRGLHIGRLTYTHHSSGELWYLRMLLTKIPGPTSFEDIRTVNN 2333
             P  +VW  +   W+ RK+G  IGR+ Y H +SG+ +YLRMLL  + GP +FE+IRTV+ 
Sbjct: 945  FPSKWVWKNKLKQWNKRKKGKMIGRIYYAHPASGDKYYLRMLLNTVKGPRTFEEIRTVDG 1004

Query: 2334 ILHSTFQDACSALGLLDDDKEWHQVITDCSNCGFAGQIRQLFVHIMVNCQVGDLRTLWIT 2513
            ++H +F+ AC ALG LDDD+EW + I + SN     Q+R LF  I+ +C+V D + +W +
Sbjct: 1005 VVHPSFKSACEALGFLDDDREWVECIREASNYASGNQLRHLFTTILCHCEVTDPKRIWES 1064

Query: 2514 HWKEMSDDILYMHRQIKNNADLILNEEQIQFFALAEINTLLRSIGKCLKDYPQLPQPPSN 2693
             W+++S+DI Y  R+  N   L L E+Q +  AL EI  L+R  GK L++YP +  P   
Sbjct: 1065 CWEDLSEDIEYKQRKNLNYPTLRLTEQQKKGHALIEIEKLMRQAGKTLEEYPDIELPKCA 1124

Query: 2694 YLCHGLNNLILDETSYDRKAMESEYNILFNNCNEEQKDIYHAVMQSIENQEGGIFFAYGS 2873
             L    N L+ +E SYD+   + E++ +F   N EQK  + ++++S     G + F  G 
Sbjct: 1125 ELRELGNRLLNEEMSYDKDKQKEEHDSIFGKLNAEQKVAFDSIIESTNKGLGKLMFVDGY 1184

Query: 2874 GGCGKTYLWRTIICKLRSEGKIVLPVASSGIAATLLPGGRTAHSRFKIPINLDEYSFCNI 3053
            GG GKTYLWR I  KLRSEGKIVL VAS GIAA LL GGRTAHSRF IP+ + E S C+I
Sbjct: 1185 GGTGKTYLWRAITTKLRSEGKIVLTVASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDI 1244

Query: 3054 GHNSDIAHLIRNTSLIIWDEAPMQHRYAFECLDRSLRDLMKSVDLKYYHMPFGGITILFG 3233
               S +A L++ TSLI+WDEAPM +R  FE LDRSLRD+++S        PFGG+T++ G
Sbjct: 1245 KQGSHLAELLKKTSLILWDEAPMANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLG 1304

Query: 3234 GDFRQILPVINYGSRSDIVAACITRSKLWNLCKVFILKQNMRLN-TAKGAVENELLKDFA 3410
            GDFRQILPV+  G R+ IV A I RS LW    +F L +NMRL+  ++   E +   DFA
Sbjct: 1305 GDFRQILPVVRKGRRTQIVNASIKRSYLWQHFHIFKLTRNMRLSCISRDEDEQKRTADFA 1364

Query: 3411 KWVLDIGN 3434
            +W+L+IG+
Sbjct: 1365 QWILNIGD 1372


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score = 1019 bits (2635), Expect = 0.0
 Identities = 521/1156 (45%), Positives = 730/1156 (63%), Gaps = 12/1156 (1%)
 Frame = +3

Query: 3    GGPSVKCPHCEAFMWKEERANKSVTKGSPAFSICYKKGQIRLPKNPKTPSYLWQL--YND 176
            G P+ +C  C + MW  ERA+K     +P FS+C  KG + L    + P YL +L  Y  
Sbjct: 4    GHPNFECEKCGSTMWYNERADKPRRPRNPTFSLCCLKGDVSLEFLEQPPDYLKELLAYKG 63

Query: 177  PVKGKHFKKCSRIYNSMFVFTSTGGKVDHSINNGGGPYVYRLNGQNHHVFGSLIPDDGQS 356
                  F++  R YNS+F FTS G K+D+++N   GPYVY+++GQN+H  G LIP  G+ 
Sbjct: 64   GRHSVKFREKIRAYNSIFAFTSMGAKIDNTVNLRPGPYVYKISGQNYHRIGGLIPGQGKQ 123

Query: 357  PKFCQLYIYDTENEVSNRMQWIDLNDGGK----LDPEIVQNLIKMFDEKNELVKRFRMAR 524
            PKF QLY++DTENE+ NR+  ++   GGK    LD +IV+ L  M D  N + K FRMAR
Sbjct: 124  PKFSQLYVHDTENEIQNRLSSLN---GGKTARDLDADIVRRLKDMLDMNNSVAKLFRMAR 180

Query: 525  DRFKDSGIVDLEIILKVCRSESGRENNIGPSNEVAGIMVGELEETEECRDIIIQAKGGGF 704
            DR       ++ I L   RS   R+     + E+ G++VG+  E+   RDI+I+ K  G 
Sbjct: 181  DRLSAPDNKEVRIRLIGTRSNDSRQYTTPTATEIVGLIVGDFGESNGRRDIVIEHKTDGL 240

Query: 705  ERVTNVHPKLMALQYPVLFPNGEDGYHKDIEYAETVENRGKT--RHKCSMKDFYSYRLHV 878
            +R+   HPK MA+QYP+LFP  EDG+H DI Y++    R K   R K +M+++Y+YR+  
Sbjct: 241  QRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVTMREYYAYRIQQ 300

Query: 879  RHNQGMSPRIGGRLFQQYVVDAFSTIEQARLWWFRTHQTTLRNELYNHICDVLRQGDGDT 1058
            R  +  +  IGGRLFQQYVVDAF+ IE+ RL W R +QT LR +LY ++CD + +GD   
Sbjct: 301  RPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCDAVVRGDTIA 360

Query: 1059 ENVGKSVILPAGFVGSKRYMQQNFQDALAVCRYVGHPDIFLTMTCNAMCDEILQMMKLIP 1238
               GK ++LP+ F G  RYM QN+QDA+A+CR  G+PDIF+T T N    EI  M++ IP
Sbjct: 361  AATGKRIVLPSSFTGGPRYMVQNYQDAMAICRTFGNPDIFMTFTANPKWPEIQYMLQKIP 420

Query: 1239 NGNPHDSPDIVARVFHLKLQQLVDDIKKKSYFGTCLGVMYVIEFQKRGLPHVHMLIWLDS 1418
              +  D PDI  RVF +KL QL+  I +  YFG  +  +Y IEFQKRGLPH H+L+WL  
Sbjct: 421  GQSVDDRPDIKTRVFKMKLDQLMKHIVEGQYFGKIISAIYTIEFQKRGLPHAHILLWLHP 480

Query: 1419 VSKKKLKENVDNFVSAEIPDPVLDPVGYEAVKTFMMHGPCGADNMKSPCMKDFRCSRHFP 1598
             +K    E++D  ++AE+P    DP  + AVK FM+HGPCG  N+ +PCM D  CSR FP
Sbjct: 481  SNKYPTPEDIDKIITAEMPSKEDDPECFNAVKQFMLHGPCGDANINAPCMIDGICSRKFP 540

Query: 1599 KKYCSRTMFDECGFPIYKRRKTDVIVKVRNKELDNQYVVPYNRDLLVKYQCHMNVEVCCH 1778
            K +   T  D  GFP Y+RR     V   +  LDN+YVVPYNR LL+ +Q H+NVE C  
Sbjct: 541  KSFFDETTIDRDGFPTYRRRDDGRHVIKGDINLDNRYVVPYNRGLLLAFQAHLNVEWCNK 600

Query: 1779 ARSLKYLFKYCLKGHDRATVEVRSQ---RNNPVTTTIESLDEIQCFFDGRYICAAEAAYL 1949
            +R++KYLFKY  KG DRA + +        +   T I  +DE++ F D RY+ A EA + 
Sbjct: 601  SRAIKYLFKYLHKGPDRAIMVIEDNVLGNRSTNATHITMVDEVKTFLDCRYVSACEACWR 660

Query: 1950 IFGFEVHHRSISVERLSYHLPGSKNCTFRSNEPLHKVVNREKNRPSKLEAFFHLNSTDQN 2129
            IF F++H+R+ +V RLS+HLP   + T R +E L  V+++E    +    +  +NS    
Sbjct: 661  IFNFDIHYRNPAVMRLSFHLPEEHSITLRDSEQLSDVISKEGVEHTMFTEWMLMNSMSSE 720

Query: 2130 ARKYTYDEIPKYYVWNGQEGIWSVRKRGLHIGRLTYTHHSSGELWYLRMLLTKIPGPTSF 2309
            AR  TY E PK +VW+  +  W  RK G  IGR+ Y H +SGE +YLR+LL  + GPTS+
Sbjct: 721  ARTLTYSEFPKKFVWDETKKKWKKRKAGRTIGRIYYAHPTSGEKYYLRILLNIVHGPTSY 780

Query: 2310 EDIRTVNNILHSTFQDACSALGLLDDDKEWHQVITDCSNCGFAGQIRQLFVHIMVNCQVG 2489
            E+I+TV  + + TF++ C+ALGLL+D++EW+  + + S      Q+R+LFV I++  +V 
Sbjct: 781  EEIKTVGGVTYQTFKETCNALGLLNDNREWNDALNEASQWATGTQLRELFVTILLYGEVA 840

Query: 2490 DLRTLWITHWKEMSDDILYMHRQIKNNADLILNEEQIQFFALAEINTLLRSIGKCLKDYP 2669
            D+  LW T+WK +SDDI+Y  R +  ++ L LN+EQIQ + L EI+ +L   G  L D+ 
Sbjct: 841  DIGKLWETNWKTLSDDIVYKKRILFQHSRLELNDEQIQSYCLIEIDKILVRAGSYLSDFD 900

Query: 2670 QLPQPPSNYLCHGLNNLILDETSYDRKAMESEYNILFNNCNEEQKDIYHAVMQSIENQEG 2849
             +P P S       N LI++E SY+   ++ E+       NE+Q DIY+ V+ ++    G
Sbjct: 901  GMPLPNSESFEATENRLIVEELSYNVDDLKKEHERCHPLLNEQQIDIYNNVINAVNTNIG 960

Query: 2850 GIFFAYGSGGCGKTYLWRTIICKLRSEGKIVLPVASSGIAATLLPGGRTAHSRFKIPINL 3029
            G++F YG GG GKT+L+RTII KLRSE KIVL VASSGIA+ LLPGGRTAHSRFKIP+ +
Sbjct: 961  GLYFVYGHGGTGKTFLYRTIIAKLRSEKKIVLAVASSGIASLLLPGGRTAHSRFKIPLEI 1020

Query: 3030 DEYSFCNIGHNSDIAHLIRNTSLIIWDEAPMQHRYAFECLDRSLRDLMKSVDLKYYHMPF 3209
             E S C+I  N+ +A L+  T LIIWDEAPM  RYAFE LDR+L+D++          PF
Sbjct: 1021 YEDSTCSINQNTHLADLMVQTDLIIWDEAPMTQRYAFEALDRTLKDIIGFKFPDRAEQPF 1080

Query: 3210 GGITILFGGDFRQILPVINYGSRSDIVAACITRSKLWNLCKVFILKQNMRL-NTAKGAVE 3386
            GG+T+L GGDFRQILPVI  G   DI+ +CI +S LW+ C +F L ++MR+ NT     E
Sbjct: 1081 GGMTVLLGGDFRQILPVIPKGRIHDIIQSCINKSFLWDYCTIFSLSKSMRVRNTTSTGKE 1140

Query: 3387 NELLKDFAKWVLDIGN 3434
            ++++++F KW+L +G+
Sbjct: 1141 HDVIREFNKWLLQLGD 1156