BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003972
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-61
ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|2...   189   6e-61
ref|XP_003529853.1| PREDICTED: probable E3 ubiquitin-protein lig...   225   1e-56
ref|XP_002460221.1| hypothetical protein SORBIDRAFT_02g024810 [S...   180   2e-55
ref|XP_003529852.1| PREDICTED: probable E3 ubiquitin-protein lig...   220   6e-55

>ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|222846424|gb|EEE83971.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  191 bits (486), Expect(2) = 1e-61
 Identities = 84/182 (46%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
 Frame = -1

Query: 931 PPSNKGKKIAENNIGQASQSKSFCNICFDYKRIEQMFPNTSCRHTFCKDCISKYVASKIH 752
           P S++  ++   ++     S SFC IC + K  +QMF   SC H+FC DCIS++VA+K+ 
Sbjct: 79  PISDQPMRVEIIDLEAGESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQ 138

Query: 751 ENVTRINCPDTNCSQGGIGPDICREIVPKEVLERWEYVLCESLIIGSQKFYCPFKDCSAL 572
           +N+  + CP  +C +  +  D CR ++ + V++RWE  LCE +I  SQ+FYCPFKDCSAL
Sbjct: 139 DNIRIVTCPGLSC-RAVLEMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSAL 197

Query: 571 MLDDGE-EKVTASECPNCRRLFCAQCKVAWHAGIDCSQFKSLNQNETENGDIMLMELAKN 395
           ++DD E E +  SECP C RLFCAQC V WH G+DC +++ LN++E    D+M+ ELAKN
Sbjct: 198 LVDDNEGETIRESECPFCHRLFCAQCSVPWHPGVDCDEYQRLNEDERGREDLMVRELAKN 257

Query: 394 QK 389
           ++
Sbjct: 258 KQ 259



 Score = 72.8 bits (177), Expect(2) = 1e-61
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = -2

Query: 405 LQKTKKWNRCPKCKFYVEKITGCLHITCRCGYEFCYGCGSIYTSSH 268
           L K K+W RCPKCKFYVE+  GC H+ CRC +EFCYGC   +  +H
Sbjct: 254 LAKNKQWGRCPKCKFYVERTEGCPHMVCRCRFEFCYGCEEQWGPTH 299


>ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|222874330|gb|EEF11461.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  189 bits (481), Expect(2) = 6e-61
 Identities = 83/182 (45%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
 Frame = -1

Query: 931 PPSNKGKKIAENNIGQASQSKSFCNICFDYKRIEQMFPNTSCRHTFCKDCISKYVASKIH 752
           P S++  ++   ++     S SFC IC + K  +QMF   SC H+FC DCIS++VA+K+ 
Sbjct: 79  PISDQPMRVEIIDLEAGESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQ 138

Query: 751 ENVTRINCPDTNCSQGGIGPDICREIVPKEVLERWEYVLCESLIIGSQKFYCPFKDCSAL 572
           +N+  + CP  +C +  +  D CR ++ + V++RWE  LCE +I  SQ+FYCPFKDCSAL
Sbjct: 139 DNIRIVTCPGLSC-RAVLEMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSAL 197

Query: 571 MLDDGE-EKVTASECPNCRRLFCAQCKVAWHAGIDCSQFKSLNQNETENGDIMLMELAKN 395
           ++DD E E +  SECP C RLFCAQC V WH G+DC +++ LN++E    D+M+ ELAK+
Sbjct: 198 LVDDNEGETIRESECPFCHRLFCAQCSVPWHPGVDCDEYQRLNEDERGREDLMVRELAKD 257

Query: 394 QK 389
           ++
Sbjct: 258 KQ 259



 Score = 72.4 bits (176), Expect(2) = 6e-61
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = -2

Query: 405 LQKTKKWNRCPKCKFYVEKITGCLHITCRCGYEFCYGCGSIYTSSH 268
           L K K+W RCPKCKFYVE+  GC H+ CRC +EFCYGC   +  +H
Sbjct: 254 LAKDKQWGRCPKCKFYVERTEGCPHMVCRCRFEFCYGCEEQWGPTH 299


>ref|XP_003529853.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-like
           [Glycine max]
          Length = 303

 Score =  225 bits (574), Expect = 1e-56
 Identities = 99/183 (54%), Positives = 135/183 (73%)
 Frame = -1

Query: 919 KGKKIAENNIGQASQSKSFCNICFDYKRIEQMFPNTSCRHTFCKDCISKYVASKIHENVT 740
           KGK   +   G++SQ + +C IC D K  E+MF N +C H+FC DCI +YVA+K+ EN++
Sbjct: 85  KGK---QKETGESSQ-QVYCGICMDAKYGEEMFRNQNCSHSFCDDCIGRYVATKVQENIS 140

Query: 739 RINCPDTNCSQGGIGPDICREIVPKEVLERWEYVLCESLIIGSQKFYCPFKDCSALMLDD 560
            + CP   C +G I P  CR  +PKEV +RWE  LCE+L++GSQKFYCPFKDCSA++++D
Sbjct: 141 MVKCPHPKC-KGVIEPQYCRSFIPKEVFDRWENALCENLVLGSQKFYCPFKDCSAVLIND 199

Query: 559 GEEKVTASECPNCRRLFCAQCKVAWHAGIDCSQFKSLNQNETENGDIMLMELAKNQKME* 380
            EE VT SECP+C RLFCAQCKV+WHAG+DC +F++L + E E  D+M+MELAKN+  + 
Sbjct: 200 AEEIVTVSECPHCNRLFCAQCKVSWHAGVDCKEFQNLKEYEREREDLMVMELAKNKSWKR 259

Query: 379 MPQ 371
            P+
Sbjct: 260 CPK 262



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 32/53 (60%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = -2

Query: 405 LQKTKKWNRCPKCKFYVEKITGCLHITCRCGYEFCYGCGSIYTSS--HAC*PR 253
           L K K W RCPKC FYVE+I GC  ITCRCG EFCY CGS ++    + C PR
Sbjct: 251 LAKNKSWKRCPKCIFYVERIDGCTRITCRCGNEFCYACGSSWSGGLHYECRPR 303


>ref|XP_002460221.1| hypothetical protein SORBIDRAFT_02g024810 [Sorghum bicolor]
           gi|241923598|gb|EER96742.1| hypothetical protein
           SORBIDRAFT_02g024810 [Sorghum bicolor]
          Length = 610

 Score =  180 bits (457), Expect(2) = 2e-55
 Identities = 69/176 (39%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
 Frame = -1

Query: 880 SQSKSFCNICFDYKRIEQMFPNTSCRHTFCKDCISKYVASKIHENVTRINCPDTNCSQGG 701
           + S+ +C IC +   + ++FP + C H FC +C+S+Y+ +K+ ++V  I CP+  C  G 
Sbjct: 395 ASSEFYCTICMESVDVRELFPVSGCTHLFCINCVSQYITAKVEDSVLSIGCPEPGCKDGA 454

Query: 700 IGPDICREIVPKEVLERWEYVLCESLIIGSQKFYCPFKDCSALMLDD---GEEKVTASEC 530
           + P++CR+++P ++ +RW   LC+S  +G+ KFYCPF DCSAL++D+   GE  +T +EC
Sbjct: 455 LDPEVCRDVIPLQLFQRWGAALCDS-ALGAFKFYCPFNDCSALLVDERRHGEAAITQAEC 513

Query: 529 PNCRRLFCAQCKVAWHAGIDCSQFKSLNQNETENGDIMLMELAKNQKME*MPQVQV 362
           P+C R+FCAQCKVAWH G+ C++F+ L ++E    D++L ++A+    +  P+ ++
Sbjct: 514 PHCCRMFCAQCKVAWHDGVTCAEFQRLGKDERSRNDLLLRKVAERSNWQRCPKCKM 569



 Score = 63.2 bits (152), Expect(2) = 2e-55
 Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = -2

Query: 387 WNRCPKCKFYVEKITGCLHITCRCGYEFCYGCGSIYTSS-HAC 262
           W RCPKCK YVE+  GC++I CRCG+ FCY C S  +   H C
Sbjct: 561 WQRCPKCKMYVERTEGCVYIVCRCGHRFCYLCASPMSQGIHRC 603



 Score =  160 bits (405), Expect = 6e-37
 Identities = 71/191 (37%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
 Frame = -1

Query: 925 SNKGKKIAEN---NIGQASQ-------SKSFCNICFDYKRIEQMFPNTSCRHTFCKDCIS 776
           S KGK+  +     +GQ S+       S  +C IC +   + ++FP   C H FC  C+S
Sbjct: 116 SGKGKEPLDGVLEELGQCSRGVDPVPSSDFYCAICMETVHVGELFPVPGCTHLFCVSCMS 175

Query: 775 KYVASKIHENVTRINCPDTNCSQGGIGPDICREIVPKEVLERWEYVLCESLIIGSQKFYC 596
           +Y+A+K+  NV  I CP+  C+ G + P++CR+++  ++ +RW   LC+S  +G+  F+C
Sbjct: 176 QYIAAKVENNVFSIGCPEPGCNDGVLDPEVCRDMISLQLFQRWGDALCDS-ALGAFGFHC 234

Query: 595 PFKDCSALMLDD---GEEKVTASECPNCRRLFCAQCKVAWHAGIDCSQFKSLNQNETENG 425
           PFKDCSAL++++    E  +  +ECP+C R+FCAQCKVAWH+G+ C  F+ L  +E    
Sbjct: 235 PFKDCSALLVNERSPDEAVIRQTECPHCSRMFCAQCKVAWHSGVTCEDFQQLRNDEQGRD 294

Query: 424 DIMLMELAKNQ 392
           D +L ++  ++
Sbjct: 295 DPLLKKVVVHE 305


>ref|XP_003529852.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI3-like [Glycine
           max]
          Length = 292

 Score =  220 bits (560), Expect = 6e-55
 Identities = 97/183 (53%), Positives = 133/183 (72%)
 Frame = -1

Query: 919 KGKKIAENNIGQASQSKSFCNICFDYKRIEQMFPNTSCRHTFCKDCISKYVASKIHENVT 740
           KGK   +   G+ S+ + +C IC D K  E+MF N +C H+FC DCI +YVA+K+ EN++
Sbjct: 75  KGK---QKETGECSR-QVYCGICMDAKYGEEMFRNQNCSHSFCDDCIGRYVATKVQENIS 130

Query: 739 RINCPDTNCSQGGIGPDICREIVPKEVLERWEYVLCESLIIGSQKFYCPFKDCSALMLDD 560
            + CP   C +G I P  CR  +PKEV +RWE  LCE+L+ GSQKFYCPFKDCSA++++D
Sbjct: 131 MVKCPHPKC-KGVIEPQYCRSFIPKEVFDRWEDALCENLVPGSQKFYCPFKDCSAMLIND 189

Query: 559 GEEKVTASECPNCRRLFCAQCKVAWHAGIDCSQFKSLNQNETENGDIMLMELAKNQKME* 380
            EE VT SECP+C RLFCAQCKV+WHAG++C +F++L + E E  D+M+MELAKN+  + 
Sbjct: 190 AEEIVTVSECPHCNRLFCAQCKVSWHAGVECKEFQNLKEYEREREDLMVMELAKNKNWKR 249

Query: 379 MPQ 371
            P+
Sbjct: 250 CPK 252



 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 33/48 (68%), Positives = 36/48 (75%)
 Frame = -2

Query: 405 LQKTKKWNRCPKCKFYVEKITGCLHITCRCGYEFCYGCGSIYTSSHAC 262
           L K K W RCPKC FYVE+I GC HI+CRCG EFCY CGS + S HAC
Sbjct: 241 LAKNKNWKRCPKCSFYVERIDGCTHISCRCGNEFCYACGSKWGSHHAC 288