BLASTX nr result

ID: Cnidium21_contig00003928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003928
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305746.1| predicted protein [Populus trichocarpa] gi|1...   204   9e-51
emb|CBI40362.3| unnamed protein product [Vitis vinifera]              204   1e-50
ref|XP_003536462.1| PREDICTED: 60S ribosomal protein L36-3-like ...   204   1e-50
ref|XP_003555154.1| PREDICTED: 60S ribosomal protein L36-3 [Glyc...   204   1e-50
ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isofo...   204   1e-50

>ref|XP_002305746.1| predicted protein [Populus trichocarpa] gi|118484529|gb|ABK94139.1|
           unknown [Populus trichocarpa]
           gi|118487398|gb|ABK95527.1| unknown [Populus
           trichocarpa] gi|222848710|gb|EEE86257.1| predicted
           protein [Populus trichocarpa]
          Length = 110

 Score =  204 bits (520), Expect = 9e-51
 Identities = 103/110 (93%), Positives = 106/110 (96%)
 Frame = -1

Query: 572 MAPQKPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKRI 393
           MAP++PNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKR  FVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 392 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 243
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRA GG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAAGGAEKKK 110


>emb|CBI40362.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  204 bits (519), Expect = 1e-50
 Identities = 101/111 (90%), Positives = 107/111 (96%)
 Frame = -1

Query: 575 VMAPQKPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKR 396
           VMAP++PNTGLFVGLNKGH+VTKKEL PRPSDRKGKTSKR HFVRN+IREVAGFAPYEKR
Sbjct: 35  VMAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEKR 94

Query: 395 ITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 243
           ITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMR+GG  EKKK
Sbjct: 95  ITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 145


>ref|XP_003536462.1| PREDICTED: 60S ribosomal protein L36-3-like [Glycine max]
          Length = 110

 Score =  204 bits (518), Expect = 1e-50
 Identities = 101/110 (91%), Positives = 105/110 (95%)
 Frame = -1

Query: 572 MAPQKPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKRI 393
           MAP+ P+TGLFVGLNKGH+VTKKEL PRPSDRKGKTSKR HFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 392 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 243
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGG  +KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110


>ref|XP_003555154.1| PREDICTED: 60S ribosomal protein L36-3 [Glycine max]
          Length = 110

 Score =  204 bits (518), Expect = 1e-50
 Identities = 101/110 (91%), Positives = 105/110 (95%)
 Frame = -1

Query: 572 MAPQKPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKRI 393
           MAP+ P+TGLFVGLNKGH+VTKKEL PRPSDRKGKTSKR HFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKHPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 392 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 243
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGG  +KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110


>ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isoform 2 [Vitis vinifera]
           gi|225464489|ref|XP_002268754.1| PREDICTED: 60S
           ribosomal protein L36-3 isoform 1 [Vitis vinifera]
           gi|302143845|emb|CBI22706.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  204 bits (518), Expect = 1e-50
 Identities = 102/110 (92%), Positives = 106/110 (96%)
 Frame = -1

Query: 572 MAPQKPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKRI 393
           MAP++PNTGLFVGLNKGHIVTKKEL PRPSDRKGKTSKR HFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 392 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 243
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMR+GG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 110


Top