BLASTX nr result

ID: Cnidium21_contig00003903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003903
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301894.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
ref|XP_002300540.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|NP_565133.1| auxin efflux carrier-like protein [Arabidopsis ...   176   1e-42
ref|XP_002887644.1| hypothetical protein ARALYDRAFT_895536 [Arab...   175   3e-42
gb|AAM62517.1| unknown [Arabidopsis thaliana]                         175   3e-42

>ref|XP_002301894.1| predicted protein [Populus trichocarpa] gi|222843620|gb|EEE81167.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  188 bits (477), Expect = 4e-46
 Identities = 88/118 (74%), Positives = 102/118 (86%)
 Frame = -2

Query: 356 DAAVPVLTLIIGANLLKGLQASGIQKSMIIGIIVARYIALPLIGTLVVRTAVKFNLVPAD 177
           D A+P L LI+GANLLKGL+ SGIQKS+I GIIVARYIALPLIG  +VR A++F  +P D
Sbjct: 288 DGAIPTLNLIMGANLLKGLRGSGIQKSVIFGIIVARYIALPLIGIFIVRGALRFGFIPQD 347

Query: 176 PLYQFVLLLQFAVPPAMNIGTITQLFGKGETECSVIMLWTYVFAAVALTLWCTFFMWL 3
           PLYQF+LLLQFAVPPAMN+GTITQLFG GETECSVI+LW Y  A+++LTLW TFFMWL
Sbjct: 348 PLYQFILLLQFAVPPAMNMGTITQLFGAGETECSVIILWAYALASISLTLWSTFFMWL 405


>ref|XP_002300540.1| predicted protein [Populus trichocarpa] gi|222847798|gb|EEE85345.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/118 (70%), Positives = 100/118 (84%)
 Frame = -2

Query: 356 DAAVPVLTLIIGANLLKGLQASGIQKSMIIGIIVARYIALPLIGTLVVRTAVKFNLVPAD 177
           DAA+P +TLI+G NLL+GL+ SGIQ S+I+GI+  R++ LPLIGT +V+ AV F LV +D
Sbjct: 255 DAAIPTVTLIVGGNLLRGLRGSGIQSSLIVGIVAVRFVFLPLIGTAIVKGAVHFGLVHSD 314

Query: 176 PLYQFVLLLQFAVPPAMNIGTITQLFGKGETECSVIMLWTYVFAAVALTLWCTFFMWL 3
           PLYQFVLLLQFAVPPA+NIGTITQLFG GE+ECSVIMLWTY  A++ LTLW T FMWL
Sbjct: 315 PLYQFVLLLQFAVPPALNIGTITQLFGAGESECSVIMLWTYALASIFLTLWSTLFMWL 372


>ref|NP_565133.1| auxin efflux carrier-like protein [Arabidopsis thaliana]
           gi|30699180|ref|NP_849892.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
           gi|12323984|gb|AAG51955.1|AC015450_16 unknown protein;
           51686-53591 [Arabidopsis thaliana]
           gi|20466518|gb|AAM20576.1| unknown protein [Arabidopsis
           thaliana] gi|23198174|gb|AAN15614.1| unknown protein
           [Arabidopsis thaliana] gi|110742076|dbj|BAE98969.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332197733|gb|AEE35854.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
           gi|332197734|gb|AEE35855.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
          Length = 390

 Score =  176 bits (447), Expect = 1e-42
 Identities = 82/118 (69%), Positives = 102/118 (86%)
 Frame = -2

Query: 356 DAAVPVLTLIIGANLLKGLQASGIQKSMIIGIIVARYIALPLIGTLVVRTAVKFNLVPAD 177
           D AVP +T+IIG NLLKGL++SG++ S IIG++VARY+ LP+ G L+VR A K +LV ++
Sbjct: 271 DGAVPAMTMIIGGNLLKGLRSSGMKMSSIIGVLVARYVLLPMSGVLIVRGAYKLDLVTSE 330

Query: 176 PLYQFVLLLQFAVPPAMNIGTITQLFGKGETECSVIMLWTYVFAAVALTLWCTFFMWL 3
           PLYQFVLLLQ+AVPPAMN+GTITQLFG GE+ECSVIMLWTY  A++ALT+W TFFMWL
Sbjct: 331 PLYQFVLLLQYAVPPAMNLGTITQLFGTGESECSVIMLWTYSLASIALTVWPTFFMWL 388


>ref|XP_002887644.1| hypothetical protein ARALYDRAFT_895536 [Arabidopsis lyrata subsp.
           lyrata] gi|297333485|gb|EFH63903.1| hypothetical protein
           ARALYDRAFT_895536 [Arabidopsis lyrata subsp. lyrata]
          Length = 391

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/118 (68%), Positives = 102/118 (86%)
 Frame = -2

Query: 356 DAAVPVLTLIIGANLLKGLQASGIQKSMIIGIIVARYIALPLIGTLVVRTAVKFNLVPAD 177
           D AVP +T+IIG NLLKGL++SG++ S IIG++VARY+ LP+ G L+VR A K +LV ++
Sbjct: 272 DGAVPAMTMIIGGNLLKGLRSSGMKMSSIIGVLVARYVLLPMSGVLIVRGAYKLDLVTSE 331

Query: 176 PLYQFVLLLQFAVPPAMNIGTITQLFGKGETECSVIMLWTYVFAAVALTLWCTFFMWL 3
           PLYQFVLLLQ+AVPPAMN+GTITQLFG GE+ECSVIMLWTY  A+++LT+W TFFMWL
Sbjct: 332 PLYQFVLLLQYAVPPAMNLGTITQLFGTGESECSVIMLWTYSLASISLTVWPTFFMWL 389


>gb|AAM62517.1| unknown [Arabidopsis thaliana]
          Length = 390

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/118 (68%), Positives = 102/118 (86%)
 Frame = -2

Query: 356 DAAVPVLTLIIGANLLKGLQASGIQKSMIIGIIVARYIALPLIGTLVVRTAVKFNLVPAD 177
           D AVP +T+IIG NLLKGL++SG++ S IIG++VARY+ LP+ G L+VR A K +LV ++
Sbjct: 271 DGAVPAMTMIIGGNLLKGLRSSGMKMSSIIGVLVARYVLLPMSGVLIVRGAYKLDLVTSE 330

Query: 176 PLYQFVLLLQFAVPPAMNIGTITQLFGKGETECSVIMLWTYVFAAVALTLWCTFFMWL 3
           PLYQFVLLLQ+AVPPAMN+GTITQLFG GE+ECSVIMLWTY  A+++LT+W TFFMWL
Sbjct: 331 PLYQFVLLLQYAVPPAMNLGTITQLFGTGESECSVIMLWTYSLASISLTVWPTFFMWL 388


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