BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003867
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ81585.1| putative tubulin alpha-2/alpha-4 chain [Brassica ...    44   2e-06
gb|ABA00480.1| alpha-tubulin [Trypanosoma danilewskyi]                 42   3e-06
gb|ABO47742.1| alpha-tubulin [Gossypium hirsutum]                      41   5e-06
gb|AAL16174.1|AF428406_1 AT4g14960/dl3520c [Arabidopsis thaliana]      41   5e-06
ref|XP_003526515.1| PREDICTED: tubulin alpha-1 chain-like isofor...    41   6e-06

>gb|AAQ81585.1| putative tubulin alpha-2/alpha-4 chain [Brassica napus]
          Length = 450

 Score = 43.9 bits (102), Expect(2) = 2e-06
 Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
 Frame = -2

Query: 400 LIVNSNSIAEVLPRIDH--NLM*SKRVFVHCSVGEDISE 290
           +I NS S+AEV PRIDH  +LM +KR FVH  VGE + E
Sbjct: 377 MISNSTSVAEVFPRIDHKFDLMYAKRAFVHWYVGEGMEE 415



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = -1

Query: 284 EFSEATKDKVSLEKEYEEVVLESGD 210
           EFSEA +D  +LEK+YEEV  E GD
Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGD 441


>gb|ABA00480.1| alpha-tubulin [Trypanosoma danilewskyi]
          Length = 451

 Score = 42.0 bits (97), Expect(2) = 3e-06
 Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = -2

Query: 400 LIVNSNSIAEVLPRIDH--NLM*SKRVFVHCSVGEDISE 290
           +I NS +IAEV  RIDH  +LM SKR FVH  VGE + E
Sbjct: 377 MIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEE 415



 Score = 36.6 bits (83), Expect(2) = 3e-06
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -1

Query: 284 EFSEATKDKVSLEKEYEEVVLESGD 210
           EFSEA +D  +LEK+YEEV  ESGD
Sbjct: 417 EFSEAREDLAALEKDYEEVGAESGD 441


>gb|ABO47742.1| alpha-tubulin [Gossypium hirsutum]
          Length = 450

 Score = 40.8 bits (94), Expect(2) = 5e-06
 Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = -2

Query: 400 LIVNSNSIAEVLPRIDH--NLM*SKRVFVHCSVGEDISE 290
           +I NS S+AEV  RIDH  +LM +KR FVH  VGE + E
Sbjct: 377 MISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 415



 Score = 37.0 bits (84), Expect(2) = 5e-06
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = -1

Query: 284 EFSEATKDKVSLEKEYEEVVLESGD 210
           EFSEA +D  +LEK+YEEV LESG+
Sbjct: 417 EFSEAREDLAALEKDYEEVGLESGE 441


>gb|AAL16174.1|AF428406_1 AT4g14960/dl3520c [Arabidopsis thaliana]
          Length = 450

 Score = 40.8 bits (94), Expect(2) = 5e-06
 Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = -2

Query: 400 LIVNSNSIAEVLPRIDH--NLM*SKRVFVHCSVGEDISE 290
           +I NS S+AEV  RIDH  +LM +KR FVH  VGE + E
Sbjct: 377 MISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 415



 Score = 37.0 bits (84), Expect(2) = 5e-06
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 284 EFSEATKDKVSLEKEYEEVVLESGDAG 204
           EFSEA +D  +LEK+YEEV  E GD G
Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDEG 443


>ref|XP_003526515.1| PREDICTED: tubulin alpha-1 chain-like isoform 1 [Glycine max]
           gi|356515659|ref|XP_003526516.1| PREDICTED: tubulin
           alpha-1 chain-like isoform 2 [Glycine max]
          Length = 452

 Score = 40.8 bits (94), Expect(2) = 6e-06
 Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = -2

Query: 400 LIVNSNSIAEVLPRIDH--NLM*SKRVFVHCSVGEDISE 290
           +I NS S+AEV  RIDH  +LM +KR FVH  VGE + E
Sbjct: 377 MISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 415



 Score = 36.6 bits (83), Expect(2) = 6e-06
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -1

Query: 284 EFSEATKDKVSLEKEYEEVVLESGD 210
           EFSEA +D  +LEK+YEEV  ESGD
Sbjct: 417 EFSEAREDLAALEKDYEEVGAESGD 441