BLASTX nr result

ID: Cnidium21_contig00003853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003853
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Gl...   119   3e-25
gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Popu...   119   3e-25
ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vi...   119   3e-25
emb|CAN82538.1| hypothetical protein VITISV_004290 [Vitis vinifera]   119   3e-25
ref|XP_002325282.1| tir-nbs-lrr resistance protein [Populus tric...   118   4e-25

>ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1420

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/118 (54%), Positives = 82/118 (69%), Gaps = 2/118 (1%)
 Frame = -1

Query: 350 IVVLSENYASSSWCLDELVEILSCCKRMKRLVIPVFYNIDPSVVRHQIGSFKQAFEKHQV 171
           I VLS+NYASSS+CLDEL  IL C +R + LVIPVFY +DPS VRHQ GS+ +A EK + 
Sbjct: 74  ITVLSQNYASSSFCLDELATILHCHQRKRLLVIPVFYKVDPSDVRHQKGSYAEALEKLET 133

Query: 170 RF--EMEKVNKWRHALKEVADFSGYHLSKNRSEPEASVVDEIVDDILFHINSKTLDVA 3
           RF  + EK+ KW+ ALK+VAD SGYH  K     E   +++IV+ +   IN +TL VA
Sbjct: 134 RFQHDPEKLQKWKMALKQVADLSGYHF-KEGDGYEFKFIEKIVERVSREINPRTLHVA 190


>gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/118 (49%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
 Frame = -1

Query: 350 IVVLSENYASSSWCLDELVEILSCCKRMKRLVIPVFYNIDPSVVRHQIGSFKQAFEKHQV 171
           IVV S+ YASS+WCL EL EIL+C   + +L +P+FY+IDPS VR Q  SF +AF++H+ 
Sbjct: 261 IVVFSKGYASSTWCLGELSEILACKSAIGQLAVPIFYDIDPSDVRKQTASFAEAFKRHEE 320

Query: 170 RFE--MEKVNKWRHALKEVADFSGYHLSKNRSEPEASVVDEIVDDILFHINSKTLDVA 3
           RF+  +E VNKWR  L E A+ SG+HL +  +  EA  ++++V+D+L  +N K L VA
Sbjct: 321 RFKENIEMVNKWRKVLVEAANLSGWHLQEMENGHEAKFIEKMVEDVLHKLNCKYLTVA 378


>ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1260

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/107 (57%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
 Frame = -1

Query: 350 IVVLSENYASSSWCLDELVEILSCCKRMKRL-VIPVFYNIDPSVVRHQIGSFKQAFEKHQ 174
           I+VLSENYASS WCL+ELV IL  CKR K L V+P+FYN+DPS VR+Q GSF +A  KH+
Sbjct: 78  IIVLSENYASSKWCLEELVMILE-CKRTKNLKVVPIFYNVDPSHVRNQTGSFGEALAKHK 136

Query: 173 --VRFEMEKVNKWRHALKEVADFSGYHLSKNRSEPEASVVDEIVDDI 39
             ++ ++EKV KWR AL +VA+ SG H  KN+  PEA +++EI+ DI
Sbjct: 137 ENLKIKVEKVQKWREALTQVANLSGLHSVKNK--PEAQLIEEIIADI 181


>emb|CAN82538.1| hypothetical protein VITISV_004290 [Vitis vinifera]
          Length = 1241

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/107 (57%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
 Frame = -1

Query: 350 IVVLSENYASSSWCLDELVEILSCCKRMKRL-VIPVFYNIDPSVVRHQIGSFKQAFEKHQ 174
           I+VLSENYASS WCL+ELV IL  CKR K L V+P+FYN+DPS VR+Q GSF +A  KH+
Sbjct: 137 IIVLSENYASSKWCLEELVMILE-CKRTKNLKVVPIFYNVDPSHVRNQTGSFGEALAKHK 195

Query: 173 --VRFEMEKVNKWRHALKEVADFSGYHLSKNRSEPEASVVDEIVDDI 39
             ++ ++EKV KWR AL +VA+ SG H  KN+  PEA +++EI+ DI
Sbjct: 196 ENLKIKVEKVQKWREALTQVANLSGLHSVKNK--PEAQLIEEIIADI 240


>ref|XP_002325282.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862157|gb|EEE99663.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 520

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/118 (49%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
 Frame = -1

Query: 350 IVVLSENYASSSWCLDELVEILSCCKRMKRLVIPVFYNIDPSVVRHQIGSFKQAFEKHQV 171
           IVV S++YASS WCLDELV+I+ C +++ ++V+P+FY+ +PS VR Q GS+ +AF++H+ 
Sbjct: 59  IVVFSKHYASSRWCLDELVKIIECRQKIGQVVLPIFYDTEPSDVRKQTGSYAKAFDEHEE 118

Query: 170 RF--EMEKVNKWRHALKEVADFSGYHLSKNRSEPEASVVDEIVDDILFHINSKTLDVA 3
           RF  EMEKVNKWR AL E  + SG+ L    +  EA  +  IV D+   + +KTL VA
Sbjct: 119 RFKEEMEKVNKWRGALAEAGNLSGWGLHNEANGYEAEFIKRIVSDVACKLGNKTLHVA 176


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