BLASTX nr result

ID: Cnidium21_contig00003851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003851
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532039.1| Polysialic acid capsule expression protein k...   412   e-113
ref|XP_002306858.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
ref|XP_002302040.1| predicted protein [Populus trichocarpa] gi|1...   409   e-112
ref|XP_004151988.1| PREDICTED: probable arabinose 5-phosphate is...   396   e-108
ref|XP_002277616.1| PREDICTED: probable arabinose 5-phosphate is...   383   e-104

>ref|XP_002532039.1| Polysialic acid capsule expression protein kpsF, putative [Ricinus
           communis] gi|223528309|gb|EEF30355.1| Polysialic acid
           capsule expression protein kpsF, putative [Ricinus
           communis]
          Length = 340

 Score =  412 bits (1060), Expect = e-113
 Identities = 208/251 (82%), Positives = 225/251 (89%), Gaps = 1/251 (0%)
 Frame = +3

Query: 108 MGSLPPPCS-KQQKTQINIEPNNLLTLFKSQQNHLNYFFQNLDLSQTLIFTQTLLNSNGT 284
           MGSL  P      K+Q  I+ N LL LFKSQQNHLNYFFQNLD+SQTL FTQTLLNS GT
Sbjct: 1   MGSLDLPSPIPDPKSQSQIDQNTLLNLFKSQQNHLNYFFQNLDISQTLSFTQTLLNSRGT 60

Query: 285 IFFTGIGKSGFVAQKISQTLVSLGIRAGFLSPVDALHGDIGILCDNDILVMFSKSGNTEE 464
           I FTG+GKSGFVA KISQTLVSLGIRAGFLSPVDALHGDIGIL   DILVMFSKSGNT+E
Sbjct: 61  ILFTGVGKSGFVANKISQTLVSLGIRAGFLSPVDALHGDIGILTPRDILVMFSKSGNTDE 120

Query: 465 LLKLVPCVKAKGVYLISVTSLQGNSLMGVCDFNVFLPLERELCPFDLAPVTSTAIQMVFG 644
           LL+LVPC KAKG +L+SVTS++GN+L  V D NV+LPLERELCPFDLAPVTSTAIQMVFG
Sbjct: 121 LLRLVPCAKAKGAFLVSVTSVEGNALAMVSDMNVYLPLERELCPFDLAPVTSTAIQMVFG 180

Query: 645 DTVAIAMMGARNLSRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGDLIMDQLVE 824
           DT+AIA+MGARNLS+DEYAANHPAGRIGKSLIFKVKDVMKKQDELP+CKEGDLIMDQLVE
Sbjct: 181 DTIAIALMGARNLSKDEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQLVE 240

Query: 825 LTSKGCGCLLV 857
           LTS+GCGCLLV
Sbjct: 241 LTSRGCGCLLV 251


>ref|XP_002306858.1| predicted protein [Populus trichocarpa] gi|222856307|gb|EEE93854.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  410 bits (1054), Expect = e-112
 Identities = 209/256 (81%), Positives = 227/256 (88%), Gaps = 6/256 (2%)
 Frame = +3

Query: 108 MGSLPP------PCSKQQKTQINIEPNNLLTLFKSQQNHLNYFFQNLDLSQTLIFTQTLL 269
           MGSLPP      P +K Q+    I+   LL LFKSQQNHLNYFFQNL+LSQ L FTQTLL
Sbjct: 1   MGSLPPFLDLPSPDAKFQQ----IDQTTLLNLFKSQQNHLNYFFQNLNLSQALTFTQTLL 56

Query: 270 NSNGTIFFTGIGKSGFVAQKISQTLVSLGIRAGFLSPVDALHGDIGILCDNDILVMFSKS 449
           N NGTIFF+G+GKSGFVA KISQTL+SLGIRAGFLSPVDALHGDIG L  +DILV+FSKS
Sbjct: 57  NCNGTIFFSGVGKSGFVANKISQTLISLGIRAGFLSPVDALHGDIGALSSSDILVLFSKS 116

Query: 450 GNTEELLKLVPCVKAKGVYLISVTSLQGNSLMGVCDFNVFLPLERELCPFDLAPVTSTAI 629
           GNTEELL+LVPC KAKG YL+SVTS++GN+L  VCD NV LPLERELCPFDLAPVTSTAI
Sbjct: 117 GNTEELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDMNVHLPLERELCPFDLAPVTSTAI 176

Query: 630 QMVFGDTVAIAMMGARNLSRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGDLIM 809
           QMVFGDTVAIA+MGARNLS++EYAANHPAGRIGKSLIFKVKDVMKKQ+ELPICKEGDLIM
Sbjct: 177 QMVFGDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIM 236

Query: 810 DQLVELTSKGCGCLLV 857
           DQLVELTSKGCGCLLV
Sbjct: 237 DQLVELTSKGCGCLLV 252


>ref|XP_002302040.1| predicted protein [Populus trichocarpa] gi|118483855|gb|ABK93818.1|
           unknown [Populus trichocarpa]
           gi|222843766|gb|EEE81313.1| predicted protein [Populus
           trichocarpa]
          Length = 341

 Score =  409 bits (1052), Expect = e-112
 Identities = 208/253 (82%), Positives = 227/253 (89%), Gaps = 3/253 (1%)
 Frame = +3

Query: 108 MGSLPPPC---SKQQKTQINIEPNNLLTLFKSQQNHLNYFFQNLDLSQTLIFTQTLLNSN 278
           MGSLPP     S   K+Q  I+   LL LFKSQQNHLNYFF+NLDLSQTL FTQTLL+ N
Sbjct: 1   MGSLPPSLDLPSPNAKSQ-QIDQTTLLNLFKSQQNHLNYFFRNLDLSQTLTFTQTLLHCN 59

Query: 279 GTIFFTGIGKSGFVAQKISQTLVSLGIRAGFLSPVDALHGDIGILCDNDILVMFSKSGNT 458
           GTIFF+G+GKSGFVA KISQTL+SLGIRAGFLSP+DALHGDIG L  +DILV+FSKSGNT
Sbjct: 60  GTIFFSGVGKSGFVANKISQTLISLGIRAGFLSPLDALHGDIGALSASDILVLFSKSGNT 119

Query: 459 EELLKLVPCVKAKGVYLISVTSLQGNSLMGVCDFNVFLPLERELCPFDLAPVTSTAIQMV 638
           EELL+LVPC KAKG YL+SVTS++GN+L  VCD NV LPLERELCPFDLAPVTSTAIQMV
Sbjct: 120 EELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDLNVRLPLERELCPFDLAPVTSTAIQMV 179

Query: 639 FGDTVAIAMMGARNLSRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGDLIMDQL 818
           FGDTVAIA+MGARNLS++EYAANHPAGRIGKSLIFKVKDVMKKQ+ELPICKEGDLIMDQL
Sbjct: 180 FGDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQL 239

Query: 819 VELTSKGCGCLLV 857
           VELTSKGCGCLLV
Sbjct: 240 VELTSKGCGCLLV 252


>ref|XP_004151988.1| PREDICTED: probable arabinose 5-phosphate isomerase-like [Cucumis
           sativus] gi|449524494|ref|XP_004169257.1| PREDICTED:
           probable arabinose 5-phosphate isomerase-like [Cucumis
           sativus]
          Length = 348

 Score =  396 bits (1018), Expect = e-108
 Identities = 200/259 (77%), Positives = 224/259 (86%), Gaps = 9/259 (3%)
 Frame = +3

Query: 108 MGSLPPPCS---------KQQKTQINIEPNNLLTLFKSQQNHLNYFFQNLDLSQTLIFTQ 260
           MGSLP             ++   Q +I  + LL LFKSQQNHLN+FFQNLDLSQTL FT 
Sbjct: 1   MGSLPSSSDISLSSSLFPEKSPNQTSINESTLLNLFKSQQNHLNFFFQNLDLSQTLKFTA 60

Query: 261 TLLNSNGTIFFTGIGKSGFVAQKISQTLVSLGIRAGFLSPVDALHGDIGILCDNDILVMF 440
           TLLNS GTIFF+G+GKSGFVA+KISQTLVSLGIR+ FLSP+DALHGDIGIL   D+LVMF
Sbjct: 61  TLLNSPGTIFFSGVGKSGFVARKISQTLVSLGIRSAFLSPLDALHGDIGILNSGDVLVMF 120

Query: 441 SKSGNTEELLKLVPCVKAKGVYLISVTSLQGNSLMGVCDFNVFLPLERELCPFDLAPVTS 620
           SKSGNTEELL+LVPC +AKG +LI+VTS++GN L GVCD NV LPLERELCPFDLAPVTS
Sbjct: 121 SKSGNTEELLRLVPCARAKGAFLIAVTSVEGNVLGGVCDMNVHLPLERELCPFDLAPVTS 180

Query: 621 TAIQMVFGDTVAIAMMGARNLSRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGD 800
           TAIQMVFGDTVAIA+MGARNL+++EYA NHPAGRIGKSLIF+VKDVMKKQ+ELP+CKEGD
Sbjct: 181 TAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFRVKDVMKKQNELPVCKEGD 240

Query: 801 LIMDQLVELTSKGCGCLLV 857
           LIMDQLVELTSKGCGCLLV
Sbjct: 241 LIMDQLVELTSKGCGCLLV 259


>ref|XP_002277616.1| PREDICTED: probable arabinose 5-phosphate isomerase [Vitis
           vinifera]
          Length = 340

 Score =  383 bits (983), Expect = e-104
 Identities = 197/252 (78%), Positives = 213/252 (84%), Gaps = 2/252 (0%)
 Frame = +3

Query: 108 MGSLPPPCSKQQKTQINIEPNNLLTLFKSQQNHLNYFFQNLDLSQTLIFTQTLLNSNGTI 287
           MGSLP         +  I    L+ LFK+QQ +LN+FF NLDL+QTLIFTQTLL   GTI
Sbjct: 1   MGSLPSFSDAHSHFK-EINTTELMNLFKTQQKYLNFFFHNLDLNQTLIFTQTLLKIEGTI 59

Query: 288 FFTGIGKSGFVAQKISQTLVSLGIRAGFLSPVDALHGDIGILCD--NDILVMFSKSGNTE 461
           FFTG+GKSGFVAQKISQTLVSLGIRA FLSPVDALHGDIGIL    ++ +V FSKSGN+E
Sbjct: 60  FFTGVGKSGFVAQKISQTLVSLGIRASFLSPVDALHGDIGILSGGTSNAVVFFSKSGNSE 119

Query: 462 ELLKLVPCVKAKGVYLISVTSLQGNSLMGVCDFNVFLPLERELCPFDLAPVTSTAIQMVF 641
           ELLKL PC KAKG YLISVTS + N L  VCD NV LPLERELCPFDLAPVTST IQMVF
Sbjct: 120 ELLKLAPCAKAKGAYLISVTSTEDNLLRAVCDLNVHLPLERELCPFDLAPVTSTTIQMVF 179

Query: 642 GDTVAIAMMGARNLSRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGDLIMDQLV 821
           GDTVA+A+MGARNL+RDEYAANHPAGRIGKSLIFKVKDVMKKQDELP+CKEGDLIMDQLV
Sbjct: 180 GDTVAVALMGARNLTRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQLV 239

Query: 822 ELTSKGCGCLLV 857
           ELTSKGCGCLLV
Sbjct: 240 ELTSKGCGCLLV 251


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