BLASTX nr result

ID: Cnidium21_contig00003798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003798
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 ...   210   3e-52
ref|XP_002314175.1| predicted protein [Populus trichocarpa] gi|2...   209   7e-52
ref|XP_002298350.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
ref|XP_002866329.1| hypothetical protein ARALYDRAFT_919171 [Arab...   206   3e-51
ref|NP_200749.1| Rab5-interacting family protein [Arabidopsis th...   205   1e-50

>ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 homolog [Vitis
           vinifera] gi|297746059|emb|CBI16115.3| unnamed protein
           product [Vitis vinifera]
          Length = 129

 Score =  210 bits (534), Expect = 3e-52
 Identities = 97/118 (82%), Positives = 109/118 (92%), Gaps = 3/118 (2%)
 Frame = -1

Query: 768 QQH---QNAHFSPFKFAKLVDPDASWDKDQLGDVLHWIRQIVALLCGLIWGAIPLIGGIW 598
           QQH   QN H SPFKFAKL+DP+ASWDKDQLGDVLHWIRQ VAL+CGL+WG+IPL+GGIW
Sbjct: 12  QQHHHDQNGHLSPFKFAKLLDPEASWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIW 71

Query: 597 IVVFLVISSAIIYGYYAMLLKVDEEDFGGHGALLQEGLFASITLFLLAWTLVYSLGHF 424
           I++FL+ISS IIYGYYA++LK+DEEDFGGHGALLQEGLFASITLFLLAW LVYSL HF
Sbjct: 72  IILFLLISSGIIYGYYAIILKIDEEDFGGHGALLQEGLFASITLFLLAWILVYSLVHF 129


>ref|XP_002314175.1| predicted protein [Populus trichocarpa] gi|222850583|gb|EEE88130.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  209 bits (531), Expect = 7e-52
 Identities = 93/114 (81%), Positives = 106/114 (92%)
 Frame = -1

Query: 765 QHQNAHFSPFKFAKLVDPDASWDKDQLGDVLHWIRQIVALLCGLIWGAIPLIGGIWIVVF 586
           QHQN HFSP KFAKL+DP+ASWDKDQLGDVLHWIRQ+VAL+CG++WG IPL+GGIWI +F
Sbjct: 20  QHQNGHFSPSKFAKLLDPEASWDKDQLGDVLHWIRQVVALVCGILWGTIPLVGGIWIGLF 79

Query: 585 LVISSAIIYGYYAMLLKVDEEDFGGHGALLQEGLFASITLFLLAWTLVYSLGHF 424
           L+ISS IIYGYYAM+LK+DE+DFGGH ALLQEGLFASITLFLL+W LVYSL HF
Sbjct: 80  LLISSGIIYGYYAMILKIDEDDFGGHSALLQEGLFASITLFLLSWILVYSLAHF 133


>ref|XP_002298350.1| predicted protein [Populus trichocarpa] gi|222845608|gb|EEE83155.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  207 bits (527), Expect = 2e-51
 Identities = 92/115 (80%), Positives = 105/115 (91%)
 Frame = -1

Query: 768 QQHQNAHFSPFKFAKLVDPDASWDKDQLGDVLHWIRQIVALLCGLIWGAIPLIGGIWIVV 589
           QQHQN H SPFK AKL+DP+ASWDKDQLGDVLHWIRQ+VAL+CGL+WGAIPL+GGIWI +
Sbjct: 18  QQHQNGHLSPFKLAKLLDPEASWDKDQLGDVLHWIRQVVALVCGLLWGAIPLVGGIWIAL 77

Query: 588 FLVISSAIIYGYYAMLLKVDEEDFGGHGALLQEGLFASITLFLLAWTLVYSLGHF 424
           FL+ISS IIY YY M+LK+DE+DFGGHG LLQEGLFASITLFLL+W L+YSL HF
Sbjct: 78  FLLISSGIIYVYYGMILKIDEDDFGGHGTLLQEGLFASITLFLLSWILMYSLAHF 132


>ref|XP_002866329.1| hypothetical protein ARALYDRAFT_919171 [Arabidopsis lyrata subsp.
           lyrata] gi|297312164|gb|EFH42588.1| hypothetical protein
           ARALYDRAFT_919171 [Arabidopsis lyrata subsp. lyrata]
          Length = 129

 Score =  206 bits (525), Expect = 3e-51
 Identities = 92/113 (81%), Positives = 102/113 (90%)
 Frame = -1

Query: 762 HQNAHFSPFKFAKLVDPDASWDKDQLGDVLHWIRQIVALLCGLIWGAIPLIGGIWIVVFL 583
           HQN H SP K AKL DPDASWDKDQLGDVLHWIRQ+V L+CGL+WG+IPL+GGIWI++FL
Sbjct: 17  HQNVHLSPSKLAKLFDPDASWDKDQLGDVLHWIRQVVGLICGLLWGSIPLVGGIWIILFL 76

Query: 582 VISSAIIYGYYAMLLKVDEEDFGGHGALLQEGLFASITLFLLAWTLVYSLGHF 424
            ISS I+YGYYAM+LKVDEEDFGGH ALLQEGLFAS+TLFLLAW LVYSL HF
Sbjct: 77  AISSGIVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLAWILVYSLAHF 129


>ref|NP_200749.1| Rab5-interacting family protein [Arabidopsis thaliana]
           gi|46931208|gb|AAT06408.1| At5g59410 [Arabidopsis
           thaliana] gi|332009799|gb|AED97182.1| Rab5-interacting
           family protein [Arabidopsis thaliana]
          Length = 130

 Score =  205 bits (521), Expect = 1e-50
 Identities = 92/115 (80%), Positives = 103/115 (89%)
 Frame = -1

Query: 768 QQHQNAHFSPFKFAKLVDPDASWDKDQLGDVLHWIRQIVALLCGLIWGAIPLIGGIWIVV 589
           + HQNAH SP K AKL DPDASWDKDQLGDVLHWIRQ+V L+ GL+WG+IPL+GGIWI++
Sbjct: 16  ENHQNAHLSPSKLAKLFDPDASWDKDQLGDVLHWIRQVVGLISGLLWGSIPLVGGIWIIL 75

Query: 588 FLVISSAIIYGYYAMLLKVDEEDFGGHGALLQEGLFASITLFLLAWTLVYSLGHF 424
           FL ISS I+YGYYAM+LKVDEEDFGGH ALLQEGLFAS+TLFLLAW LVYSL HF
Sbjct: 76  FLAISSGIVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLAWILVYSLAHF 130


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