BLASTX nr result

ID: Cnidium21_contig00003777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003777
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334345.1| predicted protein [Populus trichocarpa] gi|2...   314   4e-83
ref|NP_565018.1| Rieske (2Fe-2S) domain-containing protein [Arab...   307   3e-81
ref|XP_002528040.1| oxidoreductase, putative [Ricinus communis] ...   306   8e-81
ref|XP_002887376.1| hypothetical protein ARALYDRAFT_476280 [Arab...   305   1e-80
ref|XP_003634942.1| PREDICTED: uncharacterized protein LOC100248...   305   2e-80

>ref|XP_002334345.1| predicted protein [Populus trichocarpa] gi|222871289|gb|EEF08420.1|
            predicted protein [Populus trichocarpa]
          Length = 289

 Score =  314 bits (804), Expect = 4e-83
 Identities = 158/242 (65%), Positives = 187/242 (77%)
 Frame = -2

Query: 1000 KSKRNNALVVCQATQVSVTEXXXXXXXXXXXXGKNWIPVVPLAALPKGERRVIIQNDESI 821
            K+ R+N  +VC+AT+VS+TE             +NW+PVVPL ALPKGERRVIIQ+ E+I
Sbjct: 54   KTLRSNCRIVCKATEVSLTEESPSSGG------ENWVPVVPLTALPKGERRVIIQDGETI 107

Query: 820  LLLWYKDEVLAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGAVRDWYPKN 641
            LLLWYKD+V AIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGA+++WYP N
Sbjct: 108  LLLWYKDQVYAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGAIKEWYPNN 167

Query: 640  PVLRALTPILRTLYIYPVKTDGENIYISLXXXXXXXXXAEIVFSGRAQPGATATNVNVEE 461
            PVLR LTP LRTL++YPVKTD ENIYIS+         AEIVFSG+AQPG TA++VNV+E
Sbjct: 168  PVLRVLTPALRTLFVYPVKTDEENIYISIRGGVKSDVSAEIVFSGKAQPGVTASDVNVDE 227

Query: 460  VRMVVDEEAQGFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXXLDFIYSASNA 281
            VRMV+DE  +GFGFT +NELING+AAIIG L L+D               LDF+Y+ASN 
Sbjct: 228  VRMVIDEGQEGFGFTSKNELINGQAAIIGFLFLIDFELLTGKGVLKGTGFLDFLYAASNG 287

Query: 280  LS 275
             +
Sbjct: 288  FN 289


>ref|NP_565018.1| Rieske (2Fe-2S) domain-containing protein [Arabidopsis thaliana]
            gi|12323736|gb|AAG51832.1|AC016163_21 unknown protein;
            39989-38742 [Arabidopsis thaliana]
            gi|20260264|gb|AAM13030.1| unknown protein [Arabidopsis
            thaliana] gi|21592833|gb|AAM64783.1| unknown [Arabidopsis
            thaliana] gi|22136512|gb|AAM91334.1| unknown protein
            [Arabidopsis thaliana] gi|26453214|dbj|BAC43681.1|
            unknown protein [Arabidopsis thaliana]
            gi|332197087|gb|AEE35208.1| Rieske (2Fe-2S)
            domain-containing protein [Arabidopsis thaliana]
          Length = 287

 Score =  307 bits (787), Expect = 3e-81
 Identities = 157/250 (62%), Positives = 192/250 (76%), Gaps = 1/250 (0%)
 Frame = -2

Query: 1027 ISNTAQLEKKSK-RNNALVVCQATQVSVTEXXXXXXXXXXXXGKNWIPVVPLAALPKGER 851
            ++ T +L++ SK R+   V C+AT+VS +              +NW+PVVPL+ALPKGER
Sbjct: 43   VALTYRLDQNSKQRSGGNVRCEATEVSSSSSVSTPG-------RNWVPVVPLSALPKGER 95

Query: 850  RVIIQNDESILLLWYKDEVLAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRT 671
            RV+IQ+DE+ILLLWYK++V AIENRSPAEGAY+EGLLNA+LTQDGCIVCPSTDSTFDLRT
Sbjct: 96   RVVIQDDETILLLWYKNDVFAIENRSPAEGAYSEGLLNARLTQDGCIVCPSTDSTFDLRT 155

Query: 670  GAVRDWYPKNPVLRALTPILRTLYIYPVKTDGENIYISLXXXXXXXXXAEIVFSGRAQPG 491
            G +R+WYPKNPVLR LTP LR L++YPVK D ENIYIS+         AEIVFSG+AQPG
Sbjct: 156  GEIREWYPKNPVLRVLTPALRKLFVYPVKYDEENIYISIRDSGKTEAAAEIVFSGKAQPG 215

Query: 490  ATATNVNVEEVRMVVDEEAQGFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXX 311
             TATNVNV+EVRM+VDE ++GFGFT++NE+INGKAA+IG L LLD               
Sbjct: 216  LTATNVNVDEVRMIVDEGSEGFGFTKKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGF 275

Query: 310  LDFIYSASNA 281
            LDF+YSAS+A
Sbjct: 276  LDFLYSASDA 285


>ref|XP_002528040.1| oxidoreductase, putative [Ricinus communis]
            gi|223532570|gb|EEF34358.1| oxidoreductase, putative
            [Ricinus communis]
          Length = 280

 Score =  306 bits (784), Expect = 8e-81
 Identities = 165/291 (56%), Positives = 202/291 (69%), Gaps = 3/291 (1%)
 Frame = -2

Query: 1144 LSSTFD---SYPPSQLSKLPLNLLPFISTASRNCNKISNKLYISNTAQLEKKSKRNNALV 974
            L+S+F    S+ P ++  + L   PF  +A++ C  +S               K  +  +
Sbjct: 10   LTSSFPRNYSFNPPRIVPISLRYQPFHHSATK-CQFVS--------------LKARSPKI 54

Query: 973  VCQATQVSVTEXXXXXXXXXXXXGKNWIPVVPLAALPKGERRVIIQNDESILLLWYKDEV 794
             C+A +VSV+E             +NW+PVVPLAALP+GERRVIIQ+ E+ILLLWYKD+V
Sbjct: 55   SCKAAEVSVSEQSPSSG-------ENWVPVVPLAALPRGERRVIIQDGETILLLWYKDQV 107

Query: 793  LAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGAVRDWYPKNPVLRALTPI 614
             AIENRSPAEGAY+EGLLNAKLTQDGCIVCP+TDSTFDLR GA++DWYPKNPVLRALTP 
Sbjct: 108  FAIENRSPAEGAYSEGLLNAKLTQDGCIVCPTTDSTFDLRNGAIKDWYPKNPVLRALTPP 167

Query: 613  LRTLYIYPVKTDGENIYISLXXXXXXXXXAEIVFSGRAQPGATATNVNVEEVRMVVDEEA 434
            LR LY+YP+KTD ENIYIS+         AEIVFSG+AQPG TA++VNV+EVRMVVDE  
Sbjct: 168  LRALYVYPIKTDEENIYISMRGGVKSDASAEIVFSGKAQPGMTASDVNVDEVRMVVDENQ 227

Query: 433  QGFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXXLDFIYSASNA 281
            +GFGFT +NELINGKAA+IG L LLD               LDF+Y  +NA
Sbjct: 228  EGFGFTGKNELINGKAAVIGFLLLLDFELLTGKGLLKGIGFLDFLYGITNA 278


>ref|XP_002887376.1| hypothetical protein ARALYDRAFT_476280 [Arabidopsis lyrata subsp.
            lyrata] gi|297333217|gb|EFH63635.1| hypothetical protein
            ARALYDRAFT_476280 [Arabidopsis lyrata subsp. lyrata]
          Length = 286

 Score =  305 bits (782), Expect = 1e-80
 Identities = 157/248 (63%), Positives = 189/248 (76%), Gaps = 2/248 (0%)
 Frame = -2

Query: 1018 TAQLEKKSKRNNA--LVVCQATQVSVTEXXXXXXXXXXXXGKNWIPVVPLAALPKGERRV 845
            T +L++ SKR +    V C+AT+VS +              +NW+PVVPL+ALPKGERRV
Sbjct: 44   TYRLDQNSKRRSGGGNVRCEATEVSSSSSVSTPG-------RNWVPVVPLSALPKGERRV 96

Query: 844  IIQNDESILLLWYKDEVLAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGA 665
            +IQ+DE+ILLLWYK++V AIENRSPAEGAY+EGLLNA+LTQDGCIVCPSTDSTFDLRTG 
Sbjct: 97   VIQDDETILLLWYKNDVFAIENRSPAEGAYSEGLLNARLTQDGCIVCPSTDSTFDLRTGE 156

Query: 664  VRDWYPKNPVLRALTPILRTLYIYPVKTDGENIYISLXXXXXXXXXAEIVFSGRAQPGAT 485
            +R+WYPKNPVLR LTP LR L++YPVK D ENIYIS+         AEIVFSG+AQPG T
Sbjct: 157  IREWYPKNPVLRVLTPALRKLFVYPVKYDEENIYISIRDSGKTEAAAEIVFSGKAQPGLT 216

Query: 484  ATNVNVEEVRMVVDEEAQGFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXXLD 305
            ATNVNV+EVRM+VDE ++GFGFT +NE+INGKAA+IG L LLD               LD
Sbjct: 217  ATNVNVDEVRMIVDEGSEGFGFTVKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLD 276

Query: 304  FIYSASNA 281
            F+YSAS+A
Sbjct: 277  FLYSASDA 284


>ref|XP_003634942.1| PREDICTED: uncharacterized protein LOC100248314 isoform 2 [Vitis
           vinifera] gi|297741042|emb|CBI31354.3| unnamed protein
           product [Vitis vinifera]
          Length = 280

 Score =  305 bits (781), Expect = 2e-80
 Identities = 153/232 (65%), Positives = 179/232 (77%)
 Frame = -2

Query: 976 VVCQATQVSVTEXXXXXXXXXXXXGKNWIPVVPLAALPKGERRVIIQNDESILLLWYKDE 797
           + C+AT+VSV E              NW+PVVPL+ALPKGERRVIIQ+ E+ILLLWYKD+
Sbjct: 52  ITCKATEVSVAEESSAAGDGG-----NWVPVVPLSALPKGERRVIIQDGETILLLWYKDQ 106

Query: 796 VLAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGAVRDWYPKNPVLRALTP 617
           V AIENRSPAEGAY+EGLLNAKLTQDGCIVCP+TDSTFDL+TG ++DWYPKNPVLR LTP
Sbjct: 107 VYAIENRSPAEGAYSEGLLNAKLTQDGCIVCPTTDSTFDLQTGEIKDWYPKNPVLRVLTP 166

Query: 616 ILRTLYIYPVKTDGENIYISLXXXXXXXXXAEIVFSGRAQPGATATNVNVEEVRMVVDEE 437
            LRTL+IYPVKTD +NIYI +         AEIVFSG+AQPG TAT+VNVEEVRM+VDE+
Sbjct: 167 ALRTLFIYPVKTDDKNIYIRMSGGVSSDASAEIVFSGKAQPGLTATDVNVEEVRMIVDED 226

Query: 436 AQGFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXXLDFIYSASNA 281
            +GFGFT +NELINGKAA++G L LLD               LDF+Y+ SNA
Sbjct: 227 QEGFGFTGKNELINGKAAVVGFLLLLDFELLTGKGILKGTGFLDFLYAVSNA 278


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