BLASTX nr result

ID: Cnidium21_contig00003773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003773
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]   203   4e-65
ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containin...   203   2e-64
emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]   197   8e-61
ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containin...   197   2e-60
ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containin...   197   7e-60

>emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]
          Length = 460

 Score =  203 bits (516), Expect(2) = 4e-65
 Identities = 102/169 (60%), Positives = 108/169 (63%), Gaps = 13/169 (7%)
 Frame = +1

Query: 397 ECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDVCEFAHGVFECWLHPARYRTQV 576
           ECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGD CEFAHGVFECWLHPARYRTQ 
Sbjct: 159 ECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQP 218

Query: 577 CKDGQGCRRRVCFFAHTPEEVRVLSPRASCLSDRDHSYDGSARRLCFEGEC--------- 729
           CKDG  CRRRVCFFAHT E++RVL  ++        SYDGS  R   E  C         
Sbjct: 219 CKDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEASCAKTLPFMSS 278

Query: 730 ----SPNEXXXXXXXXXXXXVNXXXXXXXXXXIGEMVASLRQLQLNKVK 864
               SP               +          I EMVASLRQLQL+KVK
Sbjct: 279 PGSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQLQLSKVK 327



 Score = 72.0 bits (175), Expect(2) = 4e-65
 Identities = 46/111 (41%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
 Frame = +3

Query: 9   KMMIGERTRLSNPTVLVPPWSFSDNPTADISLSH-----SPNTNPN---LFENDYSFFLK 164
           KMMIGE +R  NPTVLVPPW   D+PT DIS  +     S N+N N   L   ++S FL 
Sbjct: 40  KMMIGE-SRRPNPTVLVPPWPHFDDPTVDISFPYPVSGVSVNSNANANGLQGGEHSPFLL 98

Query: 165 NSSLANLRRYI-QXXXXXXXXXXXXXXXXXXXXXTYACDNFRMYEFKVRKC 314
             +L  L+RY+                        Y+CD+FRM+EFKVR+C
Sbjct: 99  GEALTALQRYLPSNDVDVDSDSDISGREADIPVDAYSCDHFRMFEFKVRRC 149


>ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 388

 Score =  203 bits (516), Expect(2) = 2e-64
 Identities = 102/169 (60%), Positives = 108/169 (63%), Gaps = 13/169 (7%)
 Frame = +1

Query: 397 ECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDVCEFAHGVFECWLHPARYRTQV 576
           ECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGD CEFAHGVFECWLHPARYRTQ 
Sbjct: 119 ECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQP 178

Query: 577 CKDGQGCRRRVCFFAHTPEEVRVLSPRASCLSDRDHSYDGSARRLCFEGEC--------- 729
           CKDG  CRRRVCFFAHT E++RVL  ++        SYDGS  R   E  C         
Sbjct: 179 CKDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEASCAKTLPFMSS 238

Query: 730 ----SPNEXXXXXXXXXXXXVNXXXXXXXXXXIGEMVASLRQLQLNKVK 864
               SP               +          I EMVASLRQLQL+KVK
Sbjct: 239 PGSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQLQLSKVK 287



 Score = 69.7 bits (169), Expect(2) = 2e-64
 Identities = 45/110 (40%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
 Frame = +3

Query: 12  MMIGERTRLSNPTVLVPPWSFSDNPTADISLSH-----SPNTNPN---LFENDYSFFLKN 167
           MMIGE +R  NPTVLVPPW   D+PT DIS  +     S N+N N   L   ++S FL  
Sbjct: 1   MMIGE-SRHPNPTVLVPPWPHFDDPTVDISFPYPVSGVSVNSNANANGLQGGEHSPFLLG 59

Query: 168 SSLANLRRYI-QXXXXXXXXXXXXXXXXXXXXXTYACDNFRMYEFKVRKC 314
            +L  L+RY+                        Y+CD+FRM+EFKVR+C
Sbjct: 60  EALTALQRYLPSNDVDVDSDSDISGREADIPVDAYSCDHFRMFEFKVRRC 109


>emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]
          Length = 426

 Score =  197 bits (500), Expect(2) = 8e-61
 Identities = 97/168 (57%), Positives = 108/168 (64%), Gaps = 12/168 (7%)
 Frame = +1

Query: 397 ECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDVCEFAHGVFECWLHPARYRTQV 576
           ECPYAHPGEKARRRDPRKFHYSGTACP+FRKGNCKKGD CEFAHGVFECWLHPARYRTQ 
Sbjct: 159 ECPYAHPGEKARRRDPRKFHYSGTACPEFRKGNCKKGDSCEFAHGVFECWLHPARYRTQP 218

Query: 577 CKDGQGCRRRVCFFAHTPEEVRVLSPRASCLSDRDHSYDGSARRLCFEGECSP------- 735
           CKDG GCRRRVCFFAHTPE++RVL  ++        SYDGS  RL F+   S        
Sbjct: 219 CKDGSGCRRRVCFFAHTPEQLRVLPQQSPRNHGSAESYDGSPLRLAFDPYLSKGSFISSP 278

Query: 736 -----NEXXXXXXXXXXXXVNXXXXXXXXXXIGEMVASLRQLQLNKVK 864
                +              N          + E+VAS+R LQ+ K K
Sbjct: 279 TSTLISPPVSPPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQVGKAK 326



 Score = 63.9 bits (154), Expect(2) = 8e-61
 Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
 Frame = +3

Query: 6   TKMMIGERTRLSNPTVLVPPWSFSDNPTADISLSHSPNTNPNLFEN-------DYSFFLK 164
           T MMIGE TR SNPTV VPPW   D+PTA +  S  P +  N   N       DY+ F+ 
Sbjct: 46  TTMMIGEPTR-SNPTVQVPPWDPYDDPTAGMG-SPFPVSGVNFNGNAASPTGGDYNPFII 103

Query: 165 NSSLANLRRYIQXXXXXXXXXXXXXXXXXXXXXTYACDNFRMYEFKVRKC 314
           + + ++L+RY+                       ++CD FRM+EFKVR+C
Sbjct: 104 SEAFSSLQRYLPSNEFGTESGDESETVVD----AFSCDQFRMFEFKVRRC 149


>ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis
           vinifera]
          Length = 379

 Score =  197 bits (500), Expect(2) = 2e-60
 Identities = 97/168 (57%), Positives = 108/168 (64%), Gaps = 12/168 (7%)
 Frame = +1

Query: 397 ECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDVCEFAHGVFECWLHPARYRTQV 576
           ECPYAHPGEKARRRDPRKFHYSGTACP+FRKGNCKKGD CEFAHGVFECWLHPARYRTQ 
Sbjct: 112 ECPYAHPGEKARRRDPRKFHYSGTACPEFRKGNCKKGDSCEFAHGVFECWLHPARYRTQP 171

Query: 577 CKDGQGCRRRVCFFAHTPEEVRVLSPRASCLSDRDHSYDGSARRLCFEGECSP------- 735
           CKDG GCRRRVCFFAHTPE++RVL  ++        SYDGS  RL F+   S        
Sbjct: 172 CKDGSGCRRRVCFFAHTPEQLRVLPQQSPRNHGSAESYDGSPLRLAFDPYLSKGSFISSP 231

Query: 736 -----NEXXXXXXXXXXXXVNXXXXXXXXXXIGEMVASLRQLQLNKVK 864
                +              N          + E+VAS+R LQ+ K K
Sbjct: 232 TSTLISPPVSPPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQVGKAK 279



 Score = 62.4 bits (150), Expect(2) = 2e-60
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
 Frame = +3

Query: 12  MMIGERTRLSNPTVLVPPWSFSDNPTADISLSHSPNTNPNLFEN-------DYSFFLKNS 170
           MMIGE TR SNPTV VPPW   D+PTA +  S  P +  N   N       DY+ F+ + 
Sbjct: 1   MMIGEPTR-SNPTVQVPPWDPYDDPTAGMG-SPFPVSGVNFNGNAASPTGGDYNPFIISE 58

Query: 171 SLANLRRYIQXXXXXXXXXXXXXXXXXXXXXTYACDNFRMYEFKVRKC 314
           + ++L+RY+                       ++CD FRM+EFKVR+C
Sbjct: 59  AFSSLQRYLPSNEFGTESGDESETVVD----AFSCDQFRMFEFKVRRC 102


>ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           isoform 1 [Glycine max] gi|356520842|ref|XP_003529069.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           20-like isoform 2 [Glycine max]
          Length = 359

 Score =  197 bits (501), Expect(2) = 7e-60
 Identities = 99/159 (62%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
 Frame = +1

Query: 397 ECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDVCEFAHGVFECWLHPARYRTQV 576
           ECPYAHPGEKARRRDPRKFHYSG ACP+FRKGNCKKGD CEFAHGVFECWLHPARYRTQ 
Sbjct: 105 ECPYAHPGEKARRRDPRKFHYSGAACPEFRKGNCKKGDTCEFAHGVFECWLHPARYRTQP 164

Query: 577 CKDGQGCRRRVCFFAHTPEEVRVL---SPRASCLSDRDHSYDGSARRLCFEGECSPNEXX 747
           CKDG  CRRRVCFFAHTPE++RVL   SPR++  ++   SYDGS  R         +   
Sbjct: 165 CKDGTSCRRRVCFFAHTPEQLRVLPMQSPRSA--ANSSESYDGSPMRQMMSPAAFMSSPA 222

Query: 748 XXXXXXXXXXVNXXXXXXXXXXIGEMVASLRQLQLNKVK 864
                     V+          I EMVASLR LQL K+K
Sbjct: 223 ASLSPPESPPVS--------PSINEMVASLRNLQLGKMK 253



 Score = 60.5 bits (145), Expect(2) = 7e-60
 Identities = 36/101 (35%), Positives = 53/101 (52%)
 Frame = +3

Query: 12  MMIGERTRLSNPTVLVPPWSFSDNPTADISLSHSPNTNPNLFENDYSFFLKNSSLANLRR 191
           MM+GE  R +NPTV VPPW   D+PTA++  +   N   ++   +YS +    +L  L+R
Sbjct: 1   MMLGEHHR-ANPTVHVPPWPTHDDPTAEMYSAFLTN---DVNAGEYSPYYLQEALTALQR 56

Query: 192 YIQXXXXXXXXXXXXXXXXXXXXXTYACDNFRMYEFKVRKC 314
           ++                       Y+CD+FRMYEFKVR+C
Sbjct: 57  FLPSNETDADSDTEAQPDAAVD--AYSCDHFRMYEFKVRRC 95


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