BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003762
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, ...   292   6e-77
gb|AFK44729.1| unknown [Lotus japonicus]                              285   1e-74
ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloro...   283   4e-74
ref|NP_190989.1| 50S ribosomal protein L17 [Arabidopsis thaliana...   280   4e-73
gb|AAM63452.1| ribosomal protein L17-like protein [Arabidopsis t...   280   4e-73

>sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor gi|189096138|pdb|3BBO|P
           Chain P, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|3298443|dbj|BAA31512.1| chloroplast
           ribosomal protein L17 [Nicotiana tabacum]
          Length = 205

 Score =  292 bits (748), Expect = 6e-77
 Identities = 151/198 (76%), Positives = 169/198 (85%), Gaps = 4/198 (2%)
 Frame = -2

Query: 744 WNMSCLKAALPPIYNNHPCSVRLPVVSSPSGVQISF-KANPISLRSFHGLAPLHPLLSL- 571
           W+MSCLK+ALP I      S+R     SPS ++I   K++   L SF GLAPLHPLLSL 
Sbjct: 8   WSMSCLKSALPSIQPISSSSLRFSCGPSPSRLRICKPKSSSRLLHSFVGLAPLHPLLSLS 67

Query: 570 --ESNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKALLRGLTTQLLKYGRIKTTR 397
             +S SF+H FT+IDNGGR+  MRHGR+VPKLNRPPDQR+ALLRGLTTQLLK+GRIKTT+
Sbjct: 68  SQDSTSFEHSFTVIDNGGRVFAMRHGRKVPKLNRPPDQRRALLRGLTTQLLKHGRIKTTK 127

Query: 396 ARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRII 217
           ARA A+RK+VDKMITMAKDGSLHKRRQALG+IYEKQIVHALFAEVPDRYGERNGGYTRII
Sbjct: 128 ARARAVRKYVDKMITMAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGERNGGYTRII 187

Query: 216 RTLPRRGDNAPMAYIELV 163
           RTLPRRGDNAPMAYIELV
Sbjct: 188 RTLPRRGDNAPMAYIELV 205


>gb|AFK44729.1| unknown [Lotus japonicus]
          Length = 216

 Score =  285 bits (729), Expect = 1e-74
 Identities = 151/202 (74%), Positives = 166/202 (82%), Gaps = 8/202 (3%)
 Frame = -2

Query: 744 WNMSCLKAALP-PIYNNHPCSVRLPVV---SSPSGVQISFKANPISLRSFHGLAPLHPLL 577
           W+MS L++ALP P  +    S+R P     SSP  ++IS       L SF GLAPLH L 
Sbjct: 15  WSMSSLRSALPSPSPSPSSSSLRFPQFRRPSSPPSLRISKSKPQALLPSFTGLAPLHHLS 74

Query: 576 ----SLESNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKALLRGLTTQLLKYGRI 409
               S E NSF HCFTIIDNGGR+  MRHGRRVPKLNRPPDQR+AL+RGLTTQLLKYGRI
Sbjct: 75  LSSSSSEFNSFSHCFTIIDNGGRVYAMRHGRRVPKLNRPPDQRRALIRGLTTQLLKYGRI 134

Query: 408 KTTRARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGY 229
           KTTRARASA+RK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVHALFAEVP+RYGERNGGY
Sbjct: 135 KTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPERYGERNGGY 194

Query: 228 TRIIRTLPRRGDNAPMAYIELV 163
           TRIIRTLPRRGDNAPMAYIELV
Sbjct: 195 TRIIRTLPRRGDNAPMAYIELV 216


>ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Vitis
           vinifera]
          Length = 198

 Score =  283 bits (724), Expect = 4e-74
 Identities = 148/197 (75%), Positives = 166/197 (84%), Gaps = 3/197 (1%)
 Frame = -2

Query: 744 WNMSCLKAALPPIYNNHPCSVRLPVVSSPSGVQISFKANPISLRSFHGLAPLHPLLSL-- 571
           W+M+ L++ALP + +         ++ +PS + ++       L SF GLAPL PLLSL  
Sbjct: 11  WSMATLRSALPSLPS---------LLCAPSRITLTRPKPMPILPSFTGLAPLSPLLSLSS 61

Query: 570 -ESNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKALLRGLTTQLLKYGRIKTTRA 394
            ES SF+H FTIIDNGGRIS MRHGRRVPKLNRPPDQR+ALLRGLTTQLLKYGRIKTTRA
Sbjct: 62  PESTSFEHNFTIIDNGGRISAMRHGRRVPKLNRPPDQRRALLRGLTTQLLKYGRIKTTRA 121

Query: 393 RASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIR 214
           RASAMRK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVHALFAEVPDRYG+RNGGYTRIIR
Sbjct: 122 RASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGDRNGGYTRIIR 181

Query: 213 TLPRRGDNAPMAYIELV 163
           TLPRRGDNAPMAYIELV
Sbjct: 182 TLPRRGDNAPMAYIELV 198


>ref|NP_190989.1| 50S ribosomal protein L17 [Arabidopsis thaliana]
           gi|75311820|sp|Q9M385.1|RK17_ARATH RecName: Full=50S
           ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor
           gi|14030669|gb|AAK53009.1|AF375425_1
           AT3g54210/F24B22_170 [Arabidopsis thaliana]
           gi|6822067|emb|CAB70995.1| ribosomal protein L17-like
           protein [Arabidopsis thaliana]
           gi|21700779|gb|AAM70513.1| AT3g54210/F24B22_170
           [Arabidopsis thaliana] gi|22530904|gb|AAM96956.1|
           ribosomal protein L17-like protein [Arabidopsis
           thaliana] gi|23198410|gb|AAN15732.1| ribosomal protein
           L17-like protein [Arabidopsis thaliana]
           gi|332645678|gb|AEE79199.1| 50S ribosomal protein L17
           [Arabidopsis thaliana]
          Length = 211

 Score =  280 bits (715), Expect = 4e-73
 Identities = 148/197 (75%), Positives = 163/197 (82%), Gaps = 3/197 (1%)
 Frame = -2

Query: 744 WNMSCLKAALPPIYNNHPCSVRLPVVSSPSGVQISFKANPISLRSFHGLAPLHPLLSL-- 571
           W+MS LK+ALP        S+RLP  SS   V +    +  SL SF GL+P++PLLS+  
Sbjct: 20  WSMSSLKSALPST-----ASLRLPSSSSRRPVTLRLPISSPSLPSFSGLSPVNPLLSIGL 74

Query: 570 -ESNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKALLRGLTTQLLKYGRIKTTRA 394
            +  SF++ F I+D GGRI  MRHGRRVPKLNRPPDQRKALLRGLTTQLLK+GRIKTTRA
Sbjct: 75  PDWQSFENGFKIVDGGGRIYAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRA 134

Query: 393 RASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIR 214
           RASAMRK VDKMIT+AKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIR
Sbjct: 135 RASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIR 194

Query: 213 TLPRRGDNAPMAYIELV 163
           TLPRRGDNAPMAYIELV
Sbjct: 195 TLPRRGDNAPMAYIELV 211


>gb|AAM63452.1| ribosomal protein L17-like protein [Arabidopsis thaliana]
          Length = 203

 Score =  280 bits (715), Expect = 4e-73
 Identities = 148/197 (75%), Positives = 163/197 (82%), Gaps = 3/197 (1%)
 Frame = -2

Query: 744 WNMSCLKAALPPIYNNHPCSVRLPVVSSPSGVQISFKANPISLRSFHGLAPLHPLLSL-- 571
           W+MS LK+ALP        S+RLP  SS   V +    +  SL SF GL+P++PLLS+  
Sbjct: 12  WSMSSLKSALPST-----ASLRLPSSSSRRPVTLRLPISSPSLPSFSGLSPVNPLLSIGL 66

Query: 570 -ESNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKALLRGLTTQLLKYGRIKTTRA 394
            +  SF++ F I+D GGRI  MRHGRRVPKLNRPPDQRKALLRGLTTQLLK+GRIKTTRA
Sbjct: 67  PDWQSFENGFKIVDGGGRIYAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRA 126

Query: 393 RASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIR 214
           RASAMRK VDKMIT+AKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIR
Sbjct: 127 RASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIR 186

Query: 213 TLPRRGDNAPMAYIELV 163
           TLPRRGDNAPMAYIELV
Sbjct: 187 TLPRRGDNAPMAYIELV 203