BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003733
         (3696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...  1446   0.0  
emb|CBI29966.3| unnamed protein product [Vitis vinifera]             1391   0.0  
ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]    1299   0.0  
ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sat...  1253   0.0  
ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Ar...  1243   0.0  

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score = 1446 bits (3743), Expect = 0.0
 Identities = 752/1237 (60%), Positives = 925/1237 (74%), Gaps = 8/1237 (0%)
 Frame = +2

Query: 5    GYTKGTLSTEHLADNQGLAALMKLTLKPGYQFDRLLVLDVESSSLILSAKYSLVNLSDQL 184
            GY KGT+STEHLAD+QG AALMK TLKPGY+FD+LLVLDVE ++ ILSAKYSL+N + QL
Sbjct: 663  GYLKGTISTEHLADHQGHAALMKSTLKPGYEFDQLLVLDVEGNNFILSAKYSLINSAQQL 722

Query: 185  PLDISQILPHSVVHGFVCNIIETGCFVRFLGRLTGFAPKSKATDDWRVDLSKVFNIGQSV 364
            PLD++QI P+SVVHG++CNIIETGCFVRFLGRLTGF+P++K  DD R   S+ F IGQSV
Sbjct: 723  PLDLTQIHPNSVVHGYICNIIETGCFVRFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSV 782

Query: 365  RSNILEVNNETGRMTLSLKQSICPSTDASFIEEYFILEEKIAKLQLSSSTGSELKWVEEF 544
            RSNIL+VN+ETGR+TLSLKQS C STDASFI+EYF+LEEKIAKLQLS S  SELKW E F
Sbjct: 783  RSNILDVNSETGRITLSLKQSCCSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGF 842

Query: 545  GIGSLIEGEVLETKNIGAVIRFKNYDDVFGFTTPYQLGGHSVETGSIIKAVVLDVSKMER 724
             IG++IEG++ + K+ G VI F+ Y+DVFGF T YQL   + E GS ++AVVLDV+K ER
Sbjct: 843  NIGTVIEGKIHDAKDFGVVISFEKYNDVFGFITHYQL---TAERGSTVQAVVLDVAKTER 899

Query: 725  LVDLTLKPDIVNRLKEGTXXXXXXXXXXXXEAHKDMEVQEVVTAIVELVKENYLVLSIPE 904
            LVDL+LKP+ ++R KE +            EA+K+++  + V AIVE+VKENYLVLS+PE
Sbjct: 900  LVDLSLKPEFLDRHKEDSSNSQAGKKKRRREAYKELQPHQTVNAIVEIVKENYLVLSLPE 959

Query: 905  YNFALGYASLKDYNTQLLPPKHFVPGQSLSATVVALPSQSTAGRXXXXXNSRCELKETSS 1084
            YN+A+GYAS+ DYNTQ    K F+ GQS+ A+V+ALPS ST GR      S  E  ETSS
Sbjct: 960  YNYAIGYASVSDYNTQKFAQKQFLHGQSVIASVMALPSPSTVGRLLLVLKSVSEATETSS 1019

Query: 1085 SKRAKKKLSYYVGSLVQAEITEIKPLELRVKFGPSWHGRVHITEASDDNV-EDPFSNFRI 1261
            SKRAKKK SY VGSLVQAEITEIKPLELR+KFG  +HGRVHITE  D+NV E+PFSNFRI
Sbjct: 1020 SKRAKKKSSYNVGSLVQAEITEIKPLELRLKFGIGFHGRVHITEVCDENVIENPFSNFRI 1079

Query: 1262 GQMLTTKIVSKPKKLENSKKLHNWELSIKPSLLEEPADTGAQITAEEFKYVIGQSVTGFV 1441
            GQ ++ +IV+K  K EN+ K H WELSIKP +L    +   ++   EF+   GQ VTG+V
Sbjct: 1080 GQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGYV 1139

Query: 1442 YRVDTDWVWLSVSRDVRAQLYVLDSASEPKELEEFQKRFHVGQALTGYILSSNKEKKMLR 1621
            Y+V+ +W+WL++SR ++AQL++LD++ EP EL+EFQKRF VG+A++GY+LS+NKEKK+LR
Sbjct: 1140 YKVENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLLR 1199

Query: 1622 VVLQALAVFPARENGDVSNIISK------EITTVHLREGQAVGGRIFKILPGIGGLLVQI 1783
            +VL   +V     +G V NI ++      E    H+ +G  +GGRI KILPG+GGLLVQI
Sbjct: 1200 MVLHQFSVSNGTLDGKVLNIDNQHCNPPIENLIPHIHKGDTLGGRISKILPGVGGLLVQI 1259

Query: 1784 DPHLYGKVHYTELTDDWVPDPLSGYREGQFVTCKVLEVSRSVTGTTHIDXXXXXXXXXXX 1963
             PHLYGKVH+TEL D WV DPLSGY EGQFV CKVLE+  S  GT H+D           
Sbjct: 1260 GPHLYGKVHFTELKDSWVSDPLSGYHEGQFVKCKVLEIGHSEKGTVHVDLSLWSSLNGMH 1319

Query: 1964 XXKPAEIGQYLSKRLEKLEDLHPNEAVQGYVKNVTPRGCFIMLSRKFDARILLSNLSDGF 2143
                       + R+EK+++LH +  VQGYVKNVT +GCFI+LSRK DARILL+NLSDG+
Sbjct: 1320 SP---------NSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGY 1370

Query: 2144 VENPERQFPIGKLVNGKVISVEPLSMRIEVTLRTTSTPKASNNGVANLSSHSVGDIISGN 2323
            VE PER+FPIGKLV+G+V+SVEPLS R+EVTL+T+S      + V + SS  VGDII G 
Sbjct: 1371 VEKPEREFPIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGDIIFGT 1430

Query: 2324 IRRVVPYGLFISIDHTNIVGLCHLSQLPEEHTKNIDAKYKAGDRITAKILKVDGDRDRIS 2503
            I+RV  YGLFI+ID TN+VGLCH+S+L ++H  NI+ KYKAG+R+ AKILKVD +R RIS
Sbjct: 1431 IKRVESYGLFITIDDTNMVGLCHISELSDDHISNIETKYKAGERVAAKILKVDEERHRIS 1490

Query: 2504 LGIKDSDLSDDTHIQTPLDQMSDDASEENFILENEHIMSDDASGKALILSEVEPRASVLS 2683
            LG+K+S + + T      +   DD     F+  N   + +      L +   +    VLS
Sbjct: 1491 LGMKNSYIKETTQ----NNGFVDDTQLSTFLENNSREIQN------LDVEYEDEEYPVLS 1540

Query: 2684 KVESRASVLPLVVTLDDAENFPASSNADGQRLDHVDKIDTMDQRN-XXXXXXXXXXXXXX 2860
            +VESRAS+LPL V LDD  N     +A GQ   + ++ +T+D+++               
Sbjct: 1541 QVESRASILPLEVDLDDV-NHSNLDDAVGQNHIYTNETNTIDEKSKRRAKKKAKEEKEQE 1599

Query: 2861 XXXXXXXXXXXDIPRTADEFEKLIRNSPNSSFLWIKYMEFMISLSDVEKARSIAERALRT 3040
                       D+PRTADEFEKL+R SPNSSFLWIKYM  M+SL+D+EKARSIAERALRT
Sbjct: 1600 IRAAEERLMLNDVPRTADEFEKLVRGSPNSSFLWIKYMALMLSLADIEKARSIAERALRT 1659

Query: 3041 INIREESEKLNIWVAFFNLENEYGNPPEDAVAKIFQRALQYCDPKKVHLALLGVHERTER 3220
            INIREESEKLNIW+A+FNLENEYGNPPE+AV K+FQRALQYCDPKKVHLALLG++ERT  
Sbjct: 1660 INIREESEKLNIWMAYFNLENEYGNPPEEAVVKVFQRALQYCDPKKVHLALLGMYERT-- 1717

Query: 3221 PEQQKLADELVDKMVKKFKHSCKVWLRRIQRLLKKKQDGVQPLVNRALLSLPKHKHIKFI 3400
             EQ KLADEL++KM KKFKHSCKVWLRR+Q +LK+ QDGVQP++NRALL LP+HKHIKFI
Sbjct: 1718 -EQHKLADELLEKMTKKFKHSCKVWLRRVQNVLKQHQDGVQPVINRALLCLPRHKHIKFI 1776

Query: 3401 SQAAILEFKSGVPDRGRSMFEGMLREYPKRTDLWSIYLDQEIRLSDVDVIRSLFERAIXX 3580
            SQ AILEFKSGVPDRGRSMFEGMLREYPKRTDLWS+YLDQEIRL D+D+IR+LFERAI  
Sbjct: 1777 SQTAILEFKSGVPDRGRSMFEGMLREYPKRTDLWSVYLDQEIRLGDIDIIRALFERAINL 1836

Query: 3581 XXXXXXXXXXXXXYLEYEKSFSDEERIEYVKRKAMEY 3691
                         YLEYEKS  DEERIE VKRKAMEY
Sbjct: 1837 SLEPRKMKFLFKKYLEYEKSQGDEERIESVKRKAMEY 1873


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score = 1391 bits (3600), Expect = 0.0
 Identities = 733/1231 (59%), Positives = 900/1231 (73%), Gaps = 2/1231 (0%)
 Frame = +2

Query: 5    GYTKGTLSTEHLADNQGLAALMKLTLKPGYQFDRLLVLDVESSSLILSAKYSLVNLSDQL 184
            GY KGT+STEHLAD+QG AALMK TLKPGY+FD+LLVLDVE ++ ILSAKYSL+N + QL
Sbjct: 688  GYLKGTISTEHLADHQGHAALMKSTLKPGYEFDQLLVLDVEGNNFILSAKYSLINSAQQL 747

Query: 185  PLDISQILPHSVVHGFVCNIIETGCFVRFLGRLTGFAPKSKATDDWRVDLSKVFNIGQSV 364
            PLD++QI P+SVVHG++CNIIETGCFVRFLGRLTGF+P++K  DD R   S+ F IGQSV
Sbjct: 748  PLDLTQIHPNSVVHGYICNIIETGCFVRFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSV 807

Query: 365  RSNILEVNNETGRMTLSLKQSICPSTDASFIEEYFILEEKIAKLQLSSSTGSELKWVEEF 544
            RSNIL+VN+ETGR+TLSLKQS C STDASFI+EYF+LEEKIAKLQLS S  SELKW E F
Sbjct: 808  RSNILDVNSETGRITLSLKQSCCSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGF 867

Query: 545  GIGSLIEGEVLETKNIGAVIRFKNYDDVFGFTTPYQLGGHSVETGSIIKAVVLDVSKMER 724
             IG++IEG++ + K+ G VI F+ Y+DVFGF T YQL   + E GS ++AVVLDV+K ER
Sbjct: 868  NIGTVIEGKIHDAKDFGVVISFEKYNDVFGFITHYQL---TAERGSTVQAVVLDVAKTER 924

Query: 725  LVDLTLKPDIVNRLKEGTXXXXXXXXXXXXEAHKDMEVQEVVTAIVELVKENYLVLSIPE 904
            LVDL+LKP+ ++R KE +            EA+K+++  + V AIVE+VKENYL  S   
Sbjct: 925  LVDLSLKPEFLDRHKEDSSNSQAGKKKRRREAYKELQPHQTVNAIVEIVKENYLASS--- 981

Query: 905  YNFALGYASLKDYNTQLLPPKHFVPGQSLSATVVALPSQSTAGRXXXXXNSRCELKETSS 1084
                             +  K F+ GQS+ A+V+ALPS ST GR      S  E  ETSS
Sbjct: 982  ----------------FIARKQFLHGQSVIASVMALPSPSTVGRLLLVLKSVSEATETSS 1025

Query: 1085 SKRAKKKLSYYVGSLVQAEITEIKPLELRVKFGPSWHGRVHITEASDDNV-EDPFSNFRI 1261
            SKRAKKK SY VGSLVQAEITEIKPLELR+KFG  +HGRVHITE  D+NV E+PFSNFRI
Sbjct: 1026 SKRAKKKSSYNVGSLVQAEITEIKPLELRLKFGIGFHGRVHITEVCDENVIENPFSNFRI 1085

Query: 1262 GQMLTTKIVSKPKKLENSKKLHNWELSIKPSLLEEPADTGAQITAEEFKYVIGQSVTGFV 1441
            GQ ++ +IV+K  K EN+ K H WELSIKP +L    +   ++   EF+   GQ VTG+V
Sbjct: 1086 GQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGYV 1145

Query: 1442 YRVDTDWVWLSVSRDVRAQLYVLDSASEPKELEEFQKRFHVGQALTGYILSSNKEKKMLR 1621
            Y+V+ +W+WL++SR ++AQL++LD++ EP EL+EFQKRF VG+A++GY+LS+NKEKK+LR
Sbjct: 1146 YKVENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLLR 1205

Query: 1622 VVLQALAVFPARENGDVSNIISKEITTVHLREGQAVGGRIFKILPGIGGLLVQIDPHLYG 1801
            +VL              SN+I       H+ +G  +GGRI KILPG+GGLLVQI PHLYG
Sbjct: 1206 MVLH-----------QFSNLIP------HIHKGDTLGGRISKILPGVGGLLVQIGPHLYG 1248

Query: 1802 KVHYTELTDDWVPDPLSGYREGQFVTCKVLEVSRSVTGTTHIDXXXXXXXXXXXXXKPAE 1981
            KVH+TEL D WV DPLSGY EGQFV CKVLE+  S  GT H+D                 
Sbjct: 1249 KVHFTELKDSWVSDPLSGYHEGQFVKCKVLEIGHSEKGTVHVDLSLWSSLNGMHSP---- 1304

Query: 1982 IGQYLSKRLEKLEDLHPNEAVQGYVKNVTPRGCFIMLSRKFDARILLSNLSDGFVENPER 2161
                 + R+EK+++LH +  VQGYVKNVT +GCFI+LSRK DARILL+NLSDG+VE PER
Sbjct: 1305 -----NSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYVEKPER 1359

Query: 2162 QFPIGKLVNGKVISVEPLSMRIEVTLRTTSTPKASNNGVANLSSHSVGDIISGNIRRVVP 2341
            +FPIGKLV+G+V+SVEPLS R+EVTL+T+S      + V + SS  VGDII G I+RV  
Sbjct: 1360 EFPIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGDIIFGTIKRVES 1419

Query: 2342 YGLFISIDHTNIVGLCHLSQLPEEHTKNIDAKYKAGDRITAKILKVDGDRDRISLGIKDS 2521
            YGLFI+ID TN+VGLCH+S+L ++H  NI+ KYKAG+R+ AKILKVD +R RISLG+K+S
Sbjct: 1420 YGLFITIDDTNMVGLCHISELSDDHISNIETKYKAGERVAAKILKVDEERHRISLGMKNS 1479

Query: 2522 DLSDDTHIQTPLDQMSDDASEENFILENEHIMSDDASGKALILSEVEPRASVLSKVESRA 2701
             + + T      +   DD     F+  N   + +      L +   +    VLS+VESRA
Sbjct: 1480 YIKETTQ----NNGFVDDTQLSTFLENNSREIQN------LDVEYEDEEYPVLSQVESRA 1529

Query: 2702 SVLPLVVTLDDAENFPASSNADGQRLDHVDKIDTMDQRN-XXXXXXXXXXXXXXXXXXXX 2878
            S+LPL V LDD  N     +A GQ   + ++ +T+D+++                     
Sbjct: 1530 SILPLEVDLDDV-NHSNLDDAVGQNHIYTNETNTIDEKSKRRAKKKAKEEKEQEIRAAEE 1588

Query: 2879 XXXXXDIPRTADEFEKLIRNSPNSSFLWIKYMEFMISLSDVEKARSIAERALRTINIREE 3058
                 D+PRTADEFEKL+R SPNSSFLWIKYM  M+SL+D+EKARSIAERALRTINIREE
Sbjct: 1589 RLMLNDVPRTADEFEKLVRGSPNSSFLWIKYMALMLSLADIEKARSIAERALRTINIREE 1648

Query: 3059 SEKLNIWVAFFNLENEYGNPPEDAVAKIFQRALQYCDPKKVHLALLGVHERTERPEQQKL 3238
            SEKLNIW+A+FNLENEYGNPPE+AV K+FQRALQYCDPKKVHLALLG++ERT   EQ KL
Sbjct: 1649 SEKLNIWMAYFNLENEYGNPPEEAVVKVFQRALQYCDPKKVHLALLGMYERT---EQHKL 1705

Query: 3239 ADELVDKMVKKFKHSCKVWLRRIQRLLKKKQDGVQPLVNRALLSLPKHKHIKFISQAAIL 3418
            ADEL++KM KKFKHSCKVWLRR+Q +LK+ QDGVQP++NRALL LP+HKHIKFISQ AIL
Sbjct: 1706 ADELLEKMTKKFKHSCKVWLRRVQNVLKQHQDGVQPVINRALLCLPRHKHIKFISQTAIL 1765

Query: 3419 EFKSGVPDRGRSMFEGMLREYPKRTDLWSIYLDQEIRLSDVDVIRSLFERAIXXXXXXXX 3598
            EFKSGVPDRGRSMFEGMLREYPKRTDLWS+YLDQEIRL D+D+IR+LFERAI        
Sbjct: 1766 EFKSGVPDRGRSMFEGMLREYPKRTDLWSVYLDQEIRLGDIDIIRALFERAINLSLEPRK 1825

Query: 3599 XXXXXXXYLEYEKSFSDEERIEYVKRKAMEY 3691
                   YLEYEKS  DEERIE VKRKAMEY
Sbjct: 1826 MKFLFKKYLEYEKSQGDEERIESVKRKAMEY 1856


>ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 1885

 Score = 1299 bits (3362), Expect = 0.0
 Identities = 666/1235 (53%), Positives = 904/1235 (73%), Gaps = 4/1235 (0%)
 Frame = +2

Query: 2    NGYTKGTLSTEHLADNQGLAALMKLTLKPGYQFDRLLVLDVESSSLILSAKYSLVNLSDQ 181
            +G+++GT+S EHLAD+ G A LM   LKPGY FD+LLVLDV+ ++LILSAK SL+  + Q
Sbjct: 661  SGFSRGTISMEHLADHHGQAILMHSVLKPGYNFDQLLVLDVKGNNLILSAKSSLIKHAQQ 720

Query: 182  LPLDISQILPHSVVHGFVCNIIETGCFVRFLGRLTGFAPKSKATDDWRVDLSKVFNIGQS 361
            +P DI+QI P+SVVHG++CN+IE+GCFVRFLG LTGFAP++KA DD + ++ + + IGQS
Sbjct: 721  IPADINQIHPNSVVHGYICNLIESGCFVRFLGHLTGFAPRNKAADDQKSNILEAYYIGQS 780

Query: 362  VRSNILEVNNETGRMTLSLKQSICPSTDASFIEEYFILEEKIAKLQLSSSTGSELKWVEE 541
            VRSNI  V++ETGR+TLSLKQ+ C STDASFI++YF++++KIA+L+   S  S+ KW E 
Sbjct: 781  VRSNISNVSSETGRVTLSLKQTACSSTDASFIQDYFLMDDKIARLEYCGSGASDTKWDEG 840

Query: 542  FGIGSLIEGEVLETKNIGAVIRFKNYDDVFGFTTPYQLGGHSVETGSIIKAVVLDVSKME 721
            F IG + +G+V   +++G VI F++Y+DVFGF   YQL G  +E+GSI++A+VLDV K +
Sbjct: 841  FNIGMVAKGKVKAVEDVGLVISFEHYNDVFGFIANYQLAGTILESGSIVEALVLDVGKAD 900

Query: 722  RLVDLTLKPDIVNRLKEGTXXXXXXXXXXXXEAHKDMEVQEVVTAIVELVKENYLVLSIP 901
            +LV+LTLKP+ +NR KE +            EA KD+ + + V A+VE+VKENYLVLSIP
Sbjct: 901  KLVELTLKPEFINRSKESS-ISRTNKKKRRREASKDLVLHQTVNAVVEIVKENYLVLSIP 959

Query: 902  EYNFALGYASLKDYNTQLLPPKHFVPGQSLSATVVALPSQSTAGRXXXXXNSRCELKETS 1081
            E ++ +GYAS+ DYN Q  P K +  GQS+ ATV+ALPS  T+GR     +   E   +S
Sbjct: 960  ENDYTIGYASVSDYNAQRFPHKQYQNGQSVVATVMALPSPETSGRLLLLVDVVNE--TSS 1017

Query: 1082 SSKRAKKKLSYYVGSLVQAEITEIKPLELRVKFGPSWHGRVHITEASDDNV-EDPFSNFR 1258
            SSKR KKK SY VG+LV+AEIT+IK LEL++KFG   +GR+HITE    NV E+PFS+++
Sbjct: 1018 SSKRTKKKSSYKVGTLVEAEITDIKTLELKLKFGFGLYGRIHITEVYYGNVLENPFSSYK 1077

Query: 1259 IGQMLTTKIVSKPKKLENSKKLHNWELSIKPSLLEEPADTGAQITAEEFKYVIGQSVTGF 1438
            +GQ +T +IV+KP + + ++K   WELS++P ++   +D      +E  ++ IGQ V G+
Sbjct: 1078 VGQTVTARIVAKPNESDGNRKGSQWELSVRPEMVTGSSD--IDDVSENLEFKIGQCVAGY 1135

Query: 1439 VYRVDTDWVWLSVSRDVRAQLYVLDSASEPKELEEFQKRFHVGQALTGYILSSNKEKKML 1618
            VY+V+++WVWL++SR+VRAQLY+LDSA+EP ELE+FQ R+HVGQ ++G+ILS N EKK+L
Sbjct: 1136 VYKVESEWVWLTISRNVRAQLYILDSATEPSELEDFQNRYHVGQPVSGHILSVNMEKKLL 1195

Query: 1619 RVVLQALAVFPARENGD-VSNIISKEITTVHLREGQAVGGRIFKILPGIGGLLVQIDPHL 1795
            R+V++  +      + + ++N++ K++ T ++ EG  +GGR+ KILPG+GGLLVQ+ P  
Sbjct: 1196 RLVVRPFSTLSCGTSEEPLTNVVDKDL-TAYVHEGDILGGRVSKILPGVGGLLVQVGPRT 1254

Query: 1796 YGKVHYTELTDDWVPDPLSGYREGQFVTCKVLEVSRSVTGTTHIDXXXXXXXXXXXXXKP 1975
            YGKVH+TEL D WVPDPLSGY E QFV C VLEVS +V GT H+D               
Sbjct: 1255 YGKVHFTELADTWVPDPLSGYHEEQFVKCIVLEVSHTVKGTIHVDLSLGSSNVKLSQDSA 1314

Query: 1976 AEIGQYLSKRLEKLEDLHPNEAVQGYVKNVTPRGCFIMLSRKFDARILLSNLSDGFVENP 2155
                   SK +EK+EDLHP+  V+GY+KNVT +GCFIMLSRK DA+ILLSNLS+ +V+ P
Sbjct: 1315 VNAN---SKCVEKIEDLHPDMIVKGYIKNVTSKGCFIMLSRKIDAKILLSNLSEQYVQEP 1371

Query: 2156 ERQFPIGKLVNGKVISVEPLSMRIEVTLRTTSTPKASNNGVANLSSHSVGDIISGNIRRV 2335
            E++FP+GKLV G+V SVEPLS R+EVTL+ ++ P    + + +LS   VGD++SG I+RV
Sbjct: 1372 EKEFPVGKLVIGRVTSVEPLSNRVEVTLKMSTAPNIPKSEIIDLSKFHVGDVVSGRIKRV 1431

Query: 2336 VPYGLFISIDHTNIVGLCHLSQLPEEHTKNIDAKYKAGDRITAKILKVDGDRDRISLGIK 2515
              +GLFI+ID+TN+VGLCH+S++ +   +NI+A Y+AG+R+ A+ILKVD +R RISLG+K
Sbjct: 1432 ESFGLFIAIDNTNMVGLCHISEISDNRIENIEANYRAGERVKARILKVDEERHRISLGMK 1491

Query: 2516 DSDLSDDTHIQTPLDQMSDDASEENFILENEHIMSDDASGKALILSEVE-PRASVLSKVE 2692
            +S +  +T +Q P  + SD+   +   +++   M+    G + I  E E  +  +LS+ +
Sbjct: 1492 NSYMRGETVLQIPSKEESDEPIVDG--MKSITSMNSSLFGTSNIDVEDEINQFPILSQAQ 1549

Query: 2693 SRASVLPLVVTLDDAENFPASSNADGQRLDHVDKIDTMDQRN-XXXXXXXXXXXXXXXXX 2869
             RA + PL V LDD + F A +NA+ Q  +H ++ D +++++                  
Sbjct: 1550 ERADIPPLDVALDDFDQFDA-NNANSQSEEHANEEDIVNEKHKRREKKKAKEEREKQIRA 1608

Query: 2870 XXXXXXXXDIPRTADEFEKLIRNSPNSSFLWIKYMEFMISLSDVEKARSIAERALRTINI 3049
                    D+PRTADEFE+LIR+SPNSSF WIKYM+FM+S++DVEKARSIAERALRTINI
Sbjct: 1609 AEERLLEDDVPRTADEFERLIRSSPNSSFTWIKYMDFMVSMADVEKARSIAERALRTINI 1668

Query: 3050 REESEKLNIWVAFFNLENEYGNPPEDAVAKIFQRALQYCDPKKVHLALLGVHERTERPEQ 3229
            REE+EKLNIW A+FNLEN+YGNP E+AV K+FQRALQY DPKKV+LALLG++ERT   EQ
Sbjct: 1669 REENEKLNIWKAYFNLENKYGNPREEAVMKVFQRALQYNDPKKVYLALLGMYERT---EQ 1725

Query: 3230 QKLADELVDKMVKKFKHSCKVWLRRIQRLLKKKQDGVQPLVNRALLSLPKHKHIKFISQA 3409
              LADEL++KM KKFKHSCKVWLRRIQ LLK+ +DG+QP+++RA LSLPKHKHIKF SQ 
Sbjct: 1726 HNLADELLNKMTKKFKHSCKVWLRRIQSLLKQNKDGIQPVIDRASLSLPKHKHIKFFSQT 1785

Query: 3410 AILEFKSGVPDRGRSMFEGMLREYPKRTDLWSIYLDQEIRLSDVDVIRSLFERAIXXXXX 3589
            AILEFK G PDRGRSMFE +LREYPKRTDLWS+YLDQEI+  D D+I +LFERA+     
Sbjct: 1786 AILEFKVGFPDRGRSMFEKILREYPKRTDLWSVYLDQEIQHKDEDIIHALFERAVSLSLP 1845

Query: 3590 XXXXXXXXXXYLEYEKSFSDEERIEYVKRKAMEYV 3694
                      YL+YE S  D+ERIE VKRKA+EYV
Sbjct: 1846 PKKMKFLFKKYLDYEMSQGDQERIESVKRKAIEYV 1880


>ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sativus]
          Length = 1898

 Score = 1253 bits (3242), Expect = 0.0
 Identities = 674/1250 (53%), Positives = 867/1250 (69%), Gaps = 21/1250 (1%)
 Frame = +2

Query: 8    YTKGTLSTEHLADNQGLAALMKLTLKPGYQFDRLLVLDVESSSLILSAKYSLVNLSDQLP 187
            Y++G +STEHL+D+Q  A+ +K  LKPGYQFD+LLVL +E  SLILSAK SL+ L+  LP
Sbjct: 657  YSRGRISTEHLSDHQAHASSIKSVLKPGYQFDQLLVLAIEGESLILSAKQSLIKLAHMLP 716

Query: 188  LDISQILPHSVVHGFVCNIIETGCFVRFLGRLTGFAPKSKATDDWRVDLSKVFNIGQSVR 367
             D S + P+S++HGF+CNIIE GCFVRFLGRLTGF+P++KA  D ++ L + + IGQSVR
Sbjct: 717  SDSSHVNPYSIIHGFICNIIEAGCFVRFLGRLTGFSPRNKAMQDQKLYLRETYYIGQSVR 776

Query: 368  SNILEVNNETGRMTLSLKQSICPSTDASFIEEYFILEEKIAKLQLSSSTGSELKWVEEFG 547
            SN+++V+ ETGR+TLSLKQS C STDASFI+E+F  EEKIAKLQ    +  E  W EEF 
Sbjct: 777  SNVVDVSGETGRITLSLKQSTCFSTDASFIQEFFSTEEKIAKLQ----SLDESNWAEEFA 832

Query: 548  IGSLIEGEVLETKNIGAVIRFKNYDDVFGFTTPYQLGGHSVETGSIIKAVVLDVSKMERL 727
            IGS++EGEV E K+IG  I F+ Y DVFGF   + L G  VETGS I+A VLDVSK ERL
Sbjct: 833  IGSVVEGEVQEVKDIGVTISFEKYHDVFGFIALHGLSGSIVETGSTIQAAVLDVSKTERL 892

Query: 728  VDLTLKPDIVNRLKEGTXXXXXXXXXXXXEAHKDMEVQEVVTAIVELVKENYLVLSIPEY 907
            VDL+LKP++V++   G+            EA KD+E+ + V  +VE VKENYLVLS+PE+
Sbjct: 893  VDLSLKPELVDKWG-GSSSRQTNRKKRKAEAPKDLEMNQTVHTVVEAVKENYLVLSLPEF 951

Query: 908  NFALGYASLKDYNTQLLPPKHFVPGQSLSATVVALPSQSTAGRXXXXXNSRCELKETSSS 1087
              A+GYAS  DYNTQ L  KHF  GQS+ ATVVALP  ST GR      S  E   T  S
Sbjct: 952  GHAIGYASTYDYNTQRLHQKHFTVGQSVVATVVALPCPSTFGRLLLLLKSISEAIVTPGS 1011

Query: 1088 KRAKKKLSYYVGSLVQAEITEIKPLELRVKFGPSWHGRVHITE-------ASDDNVEDPF 1246
            KR++K  S  VGSLV AEI +++PLE+R+KFG    GR+H+TE         D+  E PF
Sbjct: 1012 KRSRKNSSCEVGSLVHAEIIDVQPLEMRLKFGVGLRGRIHVTEFCAQVSNTPDEASEAPF 1071

Query: 1247 SNFRIGQMLTTKIVSKPKKLENSKKLHNWELSIKPSLLEEPADTGAQITAEEFKYVIGQS 1426
            SNFR+GQ +  +IV++     +  K + WELS+KP +L++ +  G +I  E+  + IGQ 
Sbjct: 1072 SNFRVGQTVVARIVAEANHSASKGKGYLWELSVKPEVLKDFSAVGGEIVNEDLGFSIGQR 1131

Query: 1427 VTGFVYRVDTDWVWLSVSRDVRAQLYVLDSASEPKELEEFQKRFHVGQALTGYILSSNKE 1606
            VT +V  V+ DW WL+V+R V AQL++LDS+SEP EL+EF K F+VG+A++GYI +   E
Sbjct: 1132 VTAYVSNVNGDWAWLAVTRRVSAQLFILDSSSEPSELQEFSKHFYVGKAVSGYISNIIGE 1191

Query: 1607 KKMLRVVLQALAVFPA----RENGDVSNIISKEITTV--HLREGQAVGGRIFKILPGIGG 1768
            KK+LR+VL  L+   +     EN  +SN+ +     V  HL EG  VGGRI KILPG+GG
Sbjct: 1192 KKILRLVLHHLSAISSGKSDEENSKISNLPTDVCKKVICHLNEGDIVGGRISKILPGVGG 1251

Query: 1769 LLVQIDPHLYGKVHYTELTDDWVPDPLSGYREGQFVTCKVLEVSRSVTGTTHIDXXXXXX 1948
            LLVQI PHL+G+VHYTELTD  VPDPLSGY+EGQFV CKV+E++ +V GTTHID      
Sbjct: 1252 LLVQIGPHLFGRVHYTELTDCLVPDPLSGYKEGQFVKCKVIEITHAVKGTTHIDLSLRSS 1311

Query: 1949 XXXXXXXKPAEIGQY--LSKRLEKLEDLHPNEAVQGYVKNVTPRGCFIMLSRKFDARILL 2122
                   K  E   +  ++    K+ED+H +  VQGYVKN++P+GCFIMLSR  +A+ILL
Sbjct: 1312 AGILCQ-KNIECSNHENIASGRVKIEDIHAHMEVQGYVKNISPKGCFIMLSRGLEAKILL 1370

Query: 2123 SNLSDGFVENPERQFPIGKLVNGKVISVEPLSMRIEVTLRTTSTPKASNNGVANLSSHSV 2302
            SNLSDG+++NPE++FP GKLV G+++SVEPLS R+EVTL++ +   A      +L S S 
Sbjct: 1371 SNLSDGYIDNPEKEFPTGKLVRGRILSVEPLSKRVEVTLKSVTETGALRGSNNDLRSFSA 1430

Query: 2303 GDIISGNIRRVVPYGLFISIDHTNIVGLCHLSQLPEEHTKNIDAKYKAGDRITAKILKVD 2482
            GDIISG I+RV  +GLFISID+T++VGLCH+S++ ++  ++++ +Y AGD + AK+LKVD
Sbjct: 1431 GDIISGRIKRVESFGLFISIDNTDVVGLCHVSEVSDDPVESLEFRYHAGDTVKAKVLKVD 1490

Query: 2483 GDRDRISLGIKDSDLSDDTHIQTPLDQMSDDASE-ENFILENEHIMSDDASGKALI---- 2647
              R RI+LG+K S + + + + T +++  +DA++ +NFI E    M  D+S         
Sbjct: 1491 EKRHRIALGMKRSYIGERSELCTNMEEEHEDAADGDNFIGETRLSMDPDSSSTKFKDMDD 1550

Query: 2648 -LSEVEPRASVLSKVESRASVLPLVVTLDDAENFPASSNADGQRLDHVDKIDTMDQRNXX 2824
                +EP    L   ESRA V  L VTLDD +     +    +  +     D+ ++ +  
Sbjct: 1551 DFDNIEPEQP-LRLAESRALVPSLEVTLDDIDETDMVT-LQSENKELTSGTDSKEKNDRR 1608

Query: 2825 XXXXXXXXXXXXXXXXXXXXXXXDIPRTADEFEKLIRNSPNSSFLWIKYMEFMISLSDVE 3004
                                   + P T DEFEKL+R+SPNSSF+WIKYM+F    +DVE
Sbjct: 1609 EKKKAKEEREMEVRAAEERLLQNNSPTTVDEFEKLVRSSPNSSFVWIKYMDFF--KADVE 1666

Query: 3005 KARSIAERALRTINIREESEKLNIWVAFFNLENEYGNPPEDAVAKIFQRALQYCDPKKVH 3184
            KARSIAERALRTINIREE+EKLN+W+A+FNLENEYGNP EDAV KIFQRALQ  DPKKVH
Sbjct: 1667 KARSIAERALRTINIREENEKLNVWLAYFNLENEYGNPKEDAVTKIFQRALQCNDPKKVH 1726

Query: 3185 LALLGVHERTERPEQQKLADELVDKMVKKFKHSCKVWLRRIQRLLKKKQDGVQPLVNRAL 3364
            LALLG++ERT    Q  LADEL+DKM+K+FKHSCKVWLRR++ L KKKQ  +Q +VNRAL
Sbjct: 1727 LALLGMYERTN---QDNLADELLDKMIKRFKHSCKVWLRRMESLFKKKQVEIQSIVNRAL 1783

Query: 3365 LSLPKHKHIKFISQAAILEFKSGVPDRGRSMFEGMLREYPKRTDLWSIYLDQEIRLSDVD 3544
            L LPK KHIK+ISQ AILEFK GV DRGRSMFEG+LREYPKRTDLWSIYLDQEIRL D D
Sbjct: 1784 LCLPKRKHIKYISQTAILEFKCGVADRGRSMFEGILREYPKRTDLWSIYLDQEIRLGDKD 1843

Query: 3545 VIRSLFERAIXXXXXXXXXXXXXXXYLEYEKSFSDEERIEYVKRKAMEYV 3694
            +IR+LFERAI               YLEYEKS  DEERIE VK+KA+EYV
Sbjct: 1844 MIRALFERAISLSLAPKKMKFLFKKYLEYEKSVGDEERIESVKQKALEYV 1893


>ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
            lyrata] gi|297330716|gb|EFH61135.1| S1 RNA-binding
            domain-containing protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1843

 Score = 1243 bits (3216), Expect = 0.0
 Identities = 651/1247 (52%), Positives = 874/1247 (70%), Gaps = 18/1247 (1%)
 Frame = +2

Query: 5    GYTKGTLSTEHLADNQGLAALMKLTLKPGYQFDRLLVLDVESSSLILSAKYSLVNLSDQL 184
            G  KGT+STEHLAD+   A LM   L+PGY+ D+LLVLD+E ++L LS+KYSL+ L+++L
Sbjct: 599  GVLKGTISTEHLADHHDQAKLMMSLLRPGYELDKLLVLDIEGNNLSLSSKYSLIKLAEEL 658

Query: 185  PLDISQILPHSVVHGFVCNIIETGCFVRFLGRLTGFAPKSKATDDWRVDLSKVFNIGQSV 364
            P D +Q+ P+SVVHG+VCN+IE GCFVRFLGRLTGFAP+SKA DD R DLS+ F +GQSV
Sbjct: 659  PSDFNQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDDPRADLSESFFVGQSV 718

Query: 365  RSNILEVNNETGRMTLSLKQSICPSTDASFIEEYFILEEKIAKLQLSSSTGSELKWVEEF 544
            R+NI++VN E  R+TLSLKQS C S DASF++EYF+++EKI+ LQ S  T SE  WVE+F
Sbjct: 719  RANIVDVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSEYSWVEKF 778

Query: 545  GIGSLIEGEVLETKNIGAVIRFKNYDDVFGFTTPYQLGGHSVETGSIIKAVVLDVSKMER 724
             IGSLI+G + E  ++G V+ F N ++V GF   + +GG ++  GS++ AVVLD+S+ ER
Sbjct: 779  SIGSLIKGTLQEQNDLGVVVNFDNINNVLGFIPQHHMGGATMVPGSVVNAVVLDISRAER 838

Query: 725  LVDLTLKPDIVNRLKEGTXXXXXXXXXXXXEAHKDMEVQEVVTAIVELVKENYLVLSIPE 904
            LVDL+L+P+++N L +                 K++EV + V+A+VE+VKE +LVLSIPE
Sbjct: 839  LVDLSLRPELINNLTKEVSNSQLKKKRKRG-ISKELEVHQRVSAVVEIVKEQHLVLSIPE 897

Query: 905  YNFALGYASLKDYNTQLLPPKHFVPGQSLSATVVALPSQSTAGRXXXXXNSRCELKETSS 1084
            + + +GYASL DYNTQ LP K F  GQS+ A+V A+ +  T+GR     +S     ETS 
Sbjct: 898  HGYTVGYASLSDYNTQKLPVKQFSTGQSVVASVEAVQNPLTSGRLLLLLDSVSGTSETSR 957

Query: 1085 SKRAKKKLSYYVGSLVQAEITEIKPLELRVKFGPSWHGRVHITEASDDNVED-PFSNFRI 1261
            SKRAKKK S  VGS+V AEITEIKP ELRV FG S+ GR+HITE +D +  D PF+ FR+
Sbjct: 958  SKRAKKKSSCEVGSVVHAEITEIKPFELRVNFGNSFRGRIHITEVNDASTSDEPFAKFRV 1017

Query: 1262 GQMLTTKIVSKPKKLENSKKLHNWELSIKPSLLEEPADTGAQITAEEFKYVIGQSVTGFV 1441
            GQ ++ ++VSKP   +  KK   WELS+KP++L + ++      +E+ ++V GQ V G+V
Sbjct: 1018 GQSMSARVVSKPCHTD-IKKSQLWELSVKPAMLRDSSELNDIQESEQLEFVAGQCVNGYV 1076

Query: 1442 YRVDTDWVWLSVSRDVRAQLYVLDSASEPKELEEFQKRFHVGQALTGYILSSNKEKKMLR 1621
            Y+VD +WVWL++SR+V A++++LD+A E  ELEEF++ F +G+A++GY+L+ NKEK+ LR
Sbjct: 1077 YKVDKEWVWLAISRNVTARIFILDTACEAHELEEFERHFPIGKAVSGYVLTYNKEKRTLR 1136

Query: 1622 VVLQALA-VFPARENGDVSNIISKEIT------TVHLREGQAVGGRIFKILPGIGGLLVQ 1780
            +V + L  +  +  NG  S     +I+      T+ + EG  +GGRI KILPG+GGL VQ
Sbjct: 1137 LVQRPLLDIHKSIANGGGSKTDKLDISIPGDDGTLFIHEGDILGGRISKILPGVGGLRVQ 1196

Query: 1781 IDPHLYGKVHYTELTDDWVPDPLSGYREGQFVTCKVLEVSRSVTGTTHID----XXXXXX 1948
            I P+++G+VH+TE+ D WVP+PL G+REGQFV CKVLE+S S  GT  I+          
Sbjct: 1197 IGPYVFGRVHFTEINDLWVPNPLDGFREGQFVKCKVLEISSSSKGTWQIELSLRTSLDGM 1256

Query: 1949 XXXXXXXKPAEIGQYLSKRLEKLEDLHPNEAVQGYVKNVTPRGCFIMLSRKFDARILLSN 2128
                   +       + KR E+ EDL  +  VQGYVKN   +GCFI+LSRK +A++ LSN
Sbjct: 1257 SSADHISEDLNNNDNVCKRFERFEDLSLDMGVQGYVKNTMSKGCFIILSRKVEAKVKLSN 1316

Query: 2129 LSDGFVENPERQFPIGKLVNGKVISVEPLSMRIEVTLRTTSTPKASNNGVANLSSHSVGD 2308
            L D FV+ PE++FP+GKLV G+V++VEPLS RIEVTL+T +      +   ++    VGD
Sbjct: 1317 LCDTFVKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGQPKSESYDMKKLHVGD 1376

Query: 2309 IISGNIRRVVPYGLFISIDHTNIVGLCHLSQLPEEHTKNIDAKYKAGDRITAKILKVDGD 2488
            +ISG I+RV PYGLFI ID   +VGLCH++QL ++  +N+ A+YKAG+ ++AKILK+D +
Sbjct: 1377 MISGRIKRVEPYGLFIDIDQIGMVGLCHITQLSDDRIENVQARYKAGESVSAKILKLDEE 1436

Query: 2489 RDRISLGIKDSDL--SDDTHIQTPLDQMSDDASEENFILENEHIMSDDASGKALILSEVE 2662
            + RISLG+K S L   DD   Q P ++ +D+ S E   + + +     A G         
Sbjct: 1437 KRRISLGMKSSYLMNGDDVKAQPPSEEKADETSMECDPINDPNTEVLAAVGDFGFQETSG 1496

Query: 2663 PRAS----VLSKVESRASVLPLVVTLDDAENFPASSNADGQRLDHVDKIDTMDQRNXXXX 2830
             R S    VL++V+SRAS+ PL V LDD E     +N + ++L   DK +   +R     
Sbjct: 1497 GRHSGASLVLAQVDSRASIPPLEVDLDDIEEMDFDNNQNQEKLLGADKDEKSKRRE---K 1553

Query: 2831 XXXXXXXXXXXXXXXXXXXXXDIPRTADEFEKLIRNSPNSSFLWIKYMEFMISLSDVEKA 3010
                                   P +ADEFEKL+R+SPNSSF+WIKYM FM+SL+D+EKA
Sbjct: 1554 QKDKEEREKKIQAAEGRLLEHHAPESADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKA 1613

Query: 3011 RSIAERALRTINIREESEKLNIWVAFFNLENEYGNPPEDAVAKIFQRALQYCDPKKVHLA 3190
            RSIAERALRTINIREE EKLNIWVA+FNLENE+G+PPE+AV K+F+RA QYCDPKKV+LA
Sbjct: 1614 RSIAERALRTINIREEEEKLNIWVAYFNLENEHGSPPEEAVKKVFERARQYCDPKKVYLA 1673

Query: 3191 LLGVHERTERPEQQKLADELVDKMVKKFKHSCKVWLRRIQRLLKKKQDGVQPLVNRALLS 3370
            LLGV+ERT   EQ KL D+L+D+MVKKFK SCK+WLR+IQ  L++ ++G+Q +VNRALL 
Sbjct: 1674 LLGVYERT---EQYKLVDKLLDEMVKKFKQSCKIWLRKIQSSLQQNEEGIQSVVNRALLC 1730

Query: 3371 LPKHKHIKFISQAAILEFKSGVPDRGRSMFEGMLREYPKRTDLWSIYLDQEIRLSDVDVI 3550
            LP+HKHIKFISQ AILEFK GV DRGRS+FEG+LREYPKRTDLWS+YLDQEIRL +VDVI
Sbjct: 1731 LPRHKHIKFISQTAILEFKCGVADRGRSLFEGVLREYPKRTDLWSVYLDQEIRLGEVDVI 1790

Query: 3551 RSLFERAIXXXXXXXXXXXXXXXYLEYEKSFSDEERIEYVKRKAMEY 3691
            RSLFERAI               +LEYE+S  +EER EYVK++A+EY
Sbjct: 1791 RSLFERAISLSLPPKKMKFLFKKFLEYERSVGEEERAEYVKQRALEY 1837