BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003717
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arab...   119   3e-25
ref|NP_567764.1| RNA recognition motif-containing protein [Arabi...   119   3e-25
emb|CAB36546.1| putative DNA binding protein [Arabidopsis thalia...   119   3e-25
ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional ...   117   1e-24
ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional ...   116   2e-24

>ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
           lyrata] gi|297313365|gb|EFH43788.1| hypothetical protein
           ARALYDRAFT_913848 [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/72 (76%), Positives = 65/72 (90%)
 Frame = +1

Query: 1   NVSEDELRTVFGRFGELTHVKIPVGKRCGFVQFSNRANAEQALSLLNNTMLGGQNIRLSW 180
           +V ED+L++VFG+FGEL HVKIP GKRCGFVQ++NRA AEQALSLLN T LGGQ+IRLSW
Sbjct: 289 SVIEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSLLNGTQLGGQSIRLSW 348

Query: 181 GRSPSSKQAQPE 216
           GRSPS+KQ QP+
Sbjct: 349 GRSPSNKQTQPD 360


>ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName:
           Full=Polyadenylate-binding protein RBP45C;
           Short=Poly(A)-binding protein RBP45C; AltName:
           Full=RNA-binding protein 45C; Short=AtRBP45C
           gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA
           binding protein [Arabidopsis thaliana]
           gi|15450814|gb|AAK96678.1| putative DNA binding protein
           [Arabidopsis thaliana] gi|17104569|gb|AAL34173.1|
           putative DNA binding protein [Arabidopsis thaliana]
           gi|20259888|gb|AAM13291.1| putative DNA binding protein
           [Arabidopsis thaliana] gi|332659882|gb|AEE85282.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 415

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/72 (75%), Positives = 66/72 (91%)
 Frame = +1

Query: 1   NVSEDELRTVFGRFGELTHVKIPVGKRCGFVQFSNRANAEQALSLLNNTMLGGQNIRLSW 180
           +V+ED+L++VFG+FGEL HVKIP GKRCGFVQ++NRA AEQALS+LN T LGGQ+IRLSW
Sbjct: 288 SVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSW 347

Query: 181 GRSPSSKQAQPE 216
           GRSPS+KQ QP+
Sbjct: 348 GRSPSNKQTQPD 359


>emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
           gi|7269553|emb|CAB79555.1| putative DNA binding protein
           [Arabidopsis thaliana]
          Length = 427

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/72 (75%), Positives = 66/72 (91%)
 Frame = +1

Query: 1   NVSEDELRTVFGRFGELTHVKIPVGKRCGFVQFSNRANAEQALSLLNNTMLGGQNIRLSW 180
           +V+ED+L++VFG+FGEL HVKIP GKRCGFVQ++NRA AEQALS+LN T LGGQ+IRLSW
Sbjct: 288 SVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSW 347

Query: 181 GRSPSSKQAQPE 216
           GRSPS+KQ QP+
Sbjct: 348 GRSPSNKQTQPD 359


>ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 402

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/72 (72%), Positives = 65/72 (90%)
 Frame = +1

Query: 1   NVSEDELRTVFGRFGELTHVKIPVGKRCGFVQFSNRANAEQALSLLNNTMLGGQNIRLSW 180
           NV++D LR VFG++GEL HVKIP GKRCGFVQF++R+ AE+AL +LN T+LGGQN+RLSW
Sbjct: 275 NVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSW 334

Query: 181 GRSPSSKQAQPE 216
           GRSPS+KQAQP+
Sbjct: 335 GRSPSNKQAQPD 346


>ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 397

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/72 (72%), Positives = 64/72 (88%)
 Frame = +1

Query: 1   NVSEDELRTVFGRFGELTHVKIPVGKRCGFVQFSNRANAEQALSLLNNTMLGGQNIRLSW 180
           NV++D LR VFG +GEL HVKIP GKRCGFVQF++R+ AE+AL +LN T+LGGQN+RLSW
Sbjct: 271 NVTDDHLRQVFGHYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSW 330

Query: 181 GRSPSSKQAQPE 216
           GRSPS+KQAQP+
Sbjct: 331 GRSPSNKQAQPD 342