BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003711
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulf...   347   4e-93
emb|CAM57109.1| Rieske iron-sulphur protein precursor [Zantedesc...   333   4e-89
sp|P08980.2|UCRIA_SPIOL RecName: Full=Cytochrome b6-f complex ir...   328   2e-87
emb|CAA29590.1| Rieske FeS-precursor [Spinacia oleracea] gi|2261...   328   2e-87
sp|Q69GY7.1|UCRIA_SOLTU RecName: Full=Cytochrome b6-f complex ir...   327   4e-87

>ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|147826727|emb|CAN66108.1| hypothetical protein
           VITISV_020089 [Vitis vinifera]
           gi|302143099|emb|CBI20394.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score =  347 bits (889), Expect = 4e-93
 Identities = 170/230 (73%), Positives = 189/230 (82%), Gaps = 1/230 (0%)
 Frame = -1

Query: 957 MSSFTISPATS-QICSGKNGVFSPLSQSAVVKSTKGGSSVGKERAGLKVKCMASSIPADR 781
           M++ T+SPATS Q+CS +NGV SP S + + K T+    VGK + GLK+KC A+SIPADR
Sbjct: 1   MAASTLSPATSSQLCSIRNGVLSP-SHALLPKLTRTSPFVGKGK-GLKIKCQATSIPADR 58

Query: 780 VPDMDKRNTMNXXXXXXXXLPGTAMLVPYATFFAPPXXXXXXXGINAKDAFGNDVVAAEW 601
           VPDM KR  MN        LP   ML+PYATFFAPP       GI AKDA GNDV+A EW
Sbjct: 59  VPDMGKRKLMNLLLLGAISLPSAGMLIPYATFFAPPGTGSAGGGIVAKDALGNDVIADEW 118

Query: 600 LKTHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNKAENKFMCPCH 421
           LKTHGPGDRTLTQGLKGDPTYLVVE+DKTLATYGINAVCTHLGCVVPWN AENKF+CPCH
Sbjct: 119 LKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNAAENKFICPCH 178

Query: 420 GSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWIETDFRTGEDPWWS 271
           GSQYNNQG+VVRGPAPLSLALAHADIDDGKV+FVPW+ETDFRTGEDPWW+
Sbjct: 179 GSQYNNQGRVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGEDPWWA 228


>emb|CAM57109.1| Rieske iron-sulphur protein precursor [Zantedeschia aethiopica]
          Length = 238

 Score =  333 bits (854), Expect = 4e-89
 Identities = 164/235 (69%), Positives = 180/235 (76%), Gaps = 7/235 (2%)
 Frame = -1

Query: 954 SSFTISPATSQICSGKNGVFSPL------SQSAVVKSTKGGSSV-GKERAGLKVKCMASS 796
           ++ + + A SQ+CS KNG  SPL               +GG  + G+ER G KV CMASS
Sbjct: 4   TALSTAVAASQLCSSKNGPCSPLRGLLFRGLGLQGGERRGGMGLQGRERRGGKVTCMASS 63

Query: 795 IPADRVPDMDKRNTMNXXXXXXXXLPGTAMLVPYATFFAPPXXXXXXXGINAKDAFGNDV 616
           IPADRVPDM KR  MN        LP   M+VPYA FF PP       G  AKDA GNDV
Sbjct: 64  IPADRVPDMGKRQLMNLLLLGALSLPTAIMVVPYAPFFVPPSSGGDGGGTVAKDALGNDV 123

Query: 615 VAAEWLKTHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNKAENKF 436
           +A EWLKTHGPGDRTLTQGLKGDPTYLVVE+D+TLATYGINAVCTHLGCVVPWNKAENKF
Sbjct: 124 IAVEWLKTHGPGDRTLTQGLKGDPTYLVVENDRTLATYGINAVCTHLGCVVPWNKAENKF 183

Query: 435 MCPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWIETDFRTGEDPWWS 271
           +CPCHGSQYNNQGKVVRGPAPLSLALAHAD+DDGKVVFVPW+ETDFRTGEDPWW+
Sbjct: 184 LCPCHGSQYNNQGKVVRGPAPLSLALAHADLDDGKVVFVPWVETDFRTGEDPWWA 238


>sp|P08980.2|UCRIA_SPIOL RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein; AltName: Full=Rieske iron-sulfur
           protein; Short=ISP; Short=RISP; Flags: Precursor
          Length = 230

 Score =  328 bits (840), Expect = 2e-87
 Identities = 162/231 (70%), Positives = 183/231 (79%), Gaps = 2/231 (0%)
 Frame = -1

Query: 957 MSSFTISPAT-SQICSGKNGVFSPLSQSAVVKSTKGGSSVGKERA-GLKVKCMASSIPAD 784
           M+SFT+S AT SQ+CS KNG+F+P    A+ K+ +    + KER  G+K+ C A+SIPAD
Sbjct: 1   MASFTLSSATPSQLCSSKNGMFAP--SLALAKAGRVNVLISKERIRGMKLTCQATSIPAD 58

Query: 783 RVPDMDKRNTMNXXXXXXXXLPGTAMLVPYATFFAPPXXXXXXXGINAKDAFGNDVVAAE 604
            VPDM KR T+N        LP   ML+PYA+FF PP       G  AKDA GNDV+AAE
Sbjct: 59  NVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAE 118

Query: 603 WLKTHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNKAENKFMCPC 424
           WLKTH PGDRTLTQGLKGDPTYLVVESDKTLAT+GINAVCTHLGCVVP+N AENKF+CPC
Sbjct: 119 WLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPC 178

Query: 423 HGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWIETDFRTGEDPWWS 271
           HGSQYNNQG+VVRGPAPLSLALAH D+DDGKVVFVPW ETDFRTGE PWWS
Sbjct: 179 HGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229


>emb|CAA29590.1| Rieske FeS-precursor [Spinacia oleracea] gi|226151|prf||1412276A
           rieske FeS precursor protein
          Length = 247

 Score =  328 bits (840), Expect = 2e-87
 Identities = 162/231 (70%), Positives = 183/231 (79%), Gaps = 2/231 (0%)
 Frame = -1

Query: 957 MSSFTISPAT-SQICSGKNGVFSPLSQSAVVKSTKGGSSVGKERA-GLKVKCMASSIPAD 784
           M+SFT+S AT SQ+CS KNG+F+P    A+ K+ +    + KER  G+K+ C A+SIPAD
Sbjct: 18  MASFTLSSATPSQLCSSKNGMFAP--SLALAKAGRVNVLISKERIRGMKLTCQATSIPAD 75

Query: 783 RVPDMDKRNTMNXXXXXXXXLPGTAMLVPYATFFAPPXXXXXXXGINAKDAFGNDVVAAE 604
            VPDM KR T+N        LP   ML+PYA+FF PP       G  AKDA GNDV+AAE
Sbjct: 76  NVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAE 135

Query: 603 WLKTHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNKAENKFMCPC 424
           WLKTH PGDRTLTQGLKGDPTYLVVESDKTLAT+GINAVCTHLGCVVP+N AENKF+CPC
Sbjct: 136 WLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPC 195

Query: 423 HGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWIETDFRTGEDPWWS 271
           HGSQYNNQG+VVRGPAPLSLALAH D+DDGKVVFVPW ETDFRTGE PWWS
Sbjct: 196 HGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 246


>sp|Q69GY7.1|UCRIA_SOLTU RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein; AltName: Full=Rieske iron-sulfur
           protein; Short=ISP; Short=RISP; Flags: Precursor
           gi|37222949|gb|AAQ90151.1| putative Rieske Fe-S protein
           precursor [Solanum tuberosum]
          Length = 230

 Score =  327 bits (837), Expect = 4e-87
 Identities = 167/232 (71%), Positives = 185/232 (79%), Gaps = 3/232 (1%)
 Frame = -1

Query: 957 MSSFTISPAT-SQICSGKNGVFSPLSQSAVVKSTK-GGSSVGKERAGLKVKCMASSIPAD 784
           M+S T+S  T SQ+CS K+GV S +SQ+ +VK  K  G  +GK++  +K KCMA+SIPAD
Sbjct: 1   MASSTLSHVTPSQLCSSKSGV-SSVSQALLVKPMKINGHGMGKDKR-MKAKCMAASIPAD 58

Query: 783 -RVPDMDKRNTMNXXXXXXXXLPGTAMLVPYATFFAPPXXXXXXXGINAKDAFGNDVVAA 607
            RVPDM+KRN MN        LP   MLVPYATFFAPP       G  AKDA GNDVV  
Sbjct: 59  DRVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVT 118

Query: 606 EWLKTHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNKAENKFMCP 427
           EWLKTH PG RTLTQGLKGDPTYLVVE+D TLATYGINAVCTHLGCVVPWN AENKF+CP
Sbjct: 119 EWLKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICP 178

Query: 426 CHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWIETDFRTGEDPWWS 271
           CHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPW+ETDFRTG+ PWW+
Sbjct: 179 CHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWWA 230