BLASTX nr result
ID: Cnidium21_contig00003707
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00003707
(1509 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 714 0.0
ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|2... 699 0.0
ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinu... 698 0.0
ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein lig... 690 0.0
ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ... 686 0.0
>ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product
[Vitis vinifera]
Length = 395
Score = 714 bits (1844), Expect = 0.0
Identities = 334/379 (88%), Positives = 356/379 (93%), Gaps = 1/379 (0%)
Frame = -3
Query: 1498 VIAWGSGEDGQLGIGNNEEKEWVCSIKSLNSKNVRSVVAGSRNSLAICQDGKLFTWGWNQ 1319
+I+WGSGEDGQLGIGNNEEKEWVC++K+L ++NV SVVAGSRNSLAIC+DGKLFTWGWNQ
Sbjct: 8 IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67
Query: 1318 RGTLGHPPDTKTENVPSQVKALSTVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 1139
RGTLGHPP+TKTEN+PSQVKAL+ KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE
Sbjct: 68 RGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 127
Query: 1138 PERKDDSSKPLRRDIVIPQRCAHKLSVRQVAAGGTHSVVLTHEGHVWTWGQPWPPGDIKQ 959
PERKDD+ +PLRRDI IPQRCA KLSVRQVAAGGTHSVVLT EGHVWTWGQPWPPGDIKQ
Sbjct: 128 PERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ 187
Query: 958 ISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGIGDTQPRSQPIPVHGL 779
ISTPVRVQGLE+V+LIAVGAFHNLALLEDG LWAWGNNEYGQLG GDTQPRSQPI V GL
Sbjct: 188 ISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGL 247
Query: 778 SELTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVGEDIVQ 599
S+LTLVDIAAGGWHSTALTD+G VYGWGRGEHGRLGFGDDKSSKMVPQKVQLLV E+IVQ
Sbjct: 248 SDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQ 307
Query: 598 VSCGGTHSVALTKDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPINLPP-PNSSDTEAEGH 422
+SCGGTHSVALT+DGRMFSFGRGDHGRLGYGRKVTTGHP EVPINLPP N S + A GH
Sbjct: 308 ISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPATNLSGSGAGGH 367
Query: 421 WSAKLVACGGRHTLAIAEW 365
W +KLVACGGRHTLAI EW
Sbjct: 368 WCSKLVACGGRHTLAIVEW 386
Score = 85.5 bits (210), Expect = 3e-14
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 9/172 (5%)
Frame = -3
Query: 1507 DTTVIAWGSGEDGQLGIGNNEEKEWVCSIKSLNSKNVRSVVAGSRNSLAICQDGKLFTWG 1328
D + AWG+ E GQLG G+ + + +++ L+ + + AG +S A+ DG ++ WG
Sbjct: 216 DGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWG 275
Query: 1327 WNQRGTLGHPPDTKTENVPSQVKALSTVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 1148
+ G LG D ++ VP +V+ L IVQ + GG H +A+ GR +++G ++G+
Sbjct: 276 RGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRL 335
Query: 1147 GEEPERKDDSSKPLRRDIVIPQRCAHKLS---------VRQVAAGGTHSVVL 1019
G RK + P+ I +P A LS + VA GG H++ +
Sbjct: 336 GY--GRKVTTGHPMEVPINLPP--ATNLSGSGAGGHWCSKLVACGGRHTLAI 383
>ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|222870779|gb|EEF07910.1|
predicted protein [Populus trichocarpa]
Length = 392
Score = 699 bits (1803), Expect = 0.0
Identities = 331/385 (85%), Positives = 353/385 (91%), Gaps = 2/385 (0%)
Frame = -3
Query: 1507 DTTVIAWGSGEDGQLGIGNNEEKEWVCSIKSLNSKNVRSVVAGSRNSLAICQDGKLFTWG 1328
+++VIAWGSGEDGQLGIGNNEEKEWVC +K+L VRSVVAGSRNSLAIC DGKLFTWG
Sbjct: 4 ESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWG 63
Query: 1327 WNQRGTLGHPPDTKTENVPSQVKALSTVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 1148
WNQRGTLGHPP+TKTEN+PSQVKAL+ V IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC
Sbjct: 64 WNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
Query: 1147 GEEPERKDDSSKPLRRDIVIPQRCAHKLSVRQVAAGGTHSVVLTHEGHVWTWGQPWPPGD 968
GEEPERKDD+ +PLRRDIVIPQRCA KL VRQVAAGGTHSVVLT EGHVW+WGQPWPPGD
Sbjct: 124 GEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQPWPPGD 183
Query: 967 IKQISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGIGDTQPRSQPIPV 788
IKQIS PVRVQGLERV+LIAVGAFHNLAL EDG+LWAWGNNEYGQLG GDTQPRSQPI V
Sbjct: 184 IKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITV 243
Query: 787 HGLSELTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQKVQLLVGE 611
GLS LTLVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGFGD DKSSKMVPQ+V LLVGE
Sbjct: 244 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGE 303
Query: 610 DIVQVSCGGTHSVALTKDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPINLPPP-NSSDTE 434
DIVQVSCGGTHSVALT+DGRM++FGRGDHGRLGYGRKVTTG P EVPI++PPP N +D+
Sbjct: 304 DIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLTDSG 363
Query: 433 AEGHWSAKLVACGGRHTLAIAEWCT 359
G W AKLVA GGRHTLAI EW T
Sbjct: 364 DAGRWIAKLVASGGRHTLAIVEWHT 388
>ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 393
Score = 698 bits (1802), Expect = 0.0
Identities = 332/386 (86%), Positives = 349/386 (90%), Gaps = 3/386 (0%)
Frame = -3
Query: 1504 TTVIAWGSGEDGQLGIGNNEEKEWVCSIKSLNSKNVRSVVAGSRNSLAICQDGKLFTWGW 1325
T++IAWG+GEDGQLGIG NEEKEWVC + +L VRSVVAGSRNSLAIC DGKLFTWGW
Sbjct: 5 TSLIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGW 64
Query: 1324 NQRGTLGHPPDTKTENVPSQVKALSTVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 1145
NQRGTLGHP +TKTEN+PSQVKAL+ V IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG
Sbjct: 65 NQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 1144 EEPERKDDSSKPLRRDIVIPQRCAHKLSVRQVAAGGTHSVVLTHEGHVWTWGQPWPPGDI 965
EEPERKDD+ K LRRDIVIPQRCA KL VRQVAAGGTHSVVLT EGHVWTWGQPWPPGDI
Sbjct: 125 EEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI 184
Query: 964 KQISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGIGDTQPRSQPIPVH 785
KQIS PVRVQGLE+VKLIAVGAFHNLAL EDG+LWAWGNNEYGQLG GDTQPRSQPIPV
Sbjct: 185 KQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQ 244
Query: 784 GLSELTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQKVQLLVGED 608
GLS LTLVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGFGD DKSSKMVPQKV LL GED
Sbjct: 245 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 304
Query: 607 IVQVSCGGTHSVALTKDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPINLPPPN--SSDTE 434
IVQ+SCGGTHSVALT+DGRMFSFGRGDHGRLGYG+KVTTG P EVP ++PPP S E
Sbjct: 305 IVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEE 364
Query: 433 AEGHWSAKLVACGGRHTLAIAEWCTD 356
AEGHW AKLVACGGRHTLAI EW D
Sbjct: 365 AEGHWIAKLVACGGRHTLAIVEWKVD 390
Score = 83.2 bits (204), Expect = 2e-13
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Frame = -3
Query: 1507 DTTVIAWGSGEDGQLGIGNNEEKEWVCSIKSLNSKNVRSVVAGSRNSLAICQDGKLFTWG 1328
D T+ AWG+ E GQLG G+ + + ++ L+ + + AG +S A+ DG+++ WG
Sbjct: 215 DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 274
Query: 1327 WNQRGTLGHPPDTKTEN-VPSQVKALSTVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 1151
+ G LG + K+ VP +V L+ IVQ + GG H +A+ GR +++G ++G+
Sbjct: 275 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGR 334
Query: 1150 CGEEPERKDDSSKPLRRDIVIP--------QRCAHKLSVRQVAAGGTHSVVL 1019
G +K + +P+ IP + + VA GG H++ +
Sbjct: 335 LGY--GKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAI 384
>ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 690 bits (1780), Expect = 0.0
Identities = 331/384 (86%), Positives = 346/384 (90%), Gaps = 6/384 (1%)
Frame = -3
Query: 1498 VIAWGSGEDGQLGIGNNEEKEWVCSIKSLNSKNVRSVVAGSRNSLAICQDGKLFTWGWNQ 1319
+IAWGSGEDGQLGIG+NEEKEWVC +K+L +RSVVAGSRNSLAI DGKLFTWGWNQ
Sbjct: 7 IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQ 66
Query: 1318 RGTLGHPPDTK----TENVPSQVKALSTVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 1151
R TLGHP +TK TEN PSQVKALS+VKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ
Sbjct: 67 RATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 126
Query: 1150 CGEEPERKDDSSKPLRRDIVIPQRCAHKLSVRQVAAGGTHSVVLTHEGHVWTWGQPWPPG 971
CGEEPERKD + +PLRRDI IPQRCA KL VRQVAAGGTHSVVLT EGHVWTWGQPWPPG
Sbjct: 127 CGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPG 186
Query: 970 DIKQISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGIGDTQPRSQPIP 791
DIKQIS PVRVQGLE V+LIAVGAFHNLAL EDG+LWAWGNNEYGQLG GDTQPRSQPI
Sbjct: 187 DIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIR 246
Query: 790 VHGLSELTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQKVQLLVG 614
V GLS+LTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD DKSSKMVPQKVQLL G
Sbjct: 247 VQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAG 306
Query: 613 EDIVQVSCGGTHSVALTKDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPINLPPP-NSSDT 437
EDIVQVSCGGTHSVALT+DG MFSFGRGDHGRLGYGRKVTTG P EVPI+LPPP + S T
Sbjct: 307 EDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRKVTTGQPMEVPIDLPPPQDPSGT 366
Query: 436 EAEGHWSAKLVACGGRHTLAIAEW 365
EGHW AKLVACGGRHTLAI EW
Sbjct: 367 ATEGHWIAKLVACGGRHTLAIVEW 390
Score = 80.9 bits (198), Expect = 8e-13
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 8/171 (4%)
Frame = -3
Query: 1507 DTTVIAWGSGEDGQLGIGNNEEKEWVCSIKSLNSKNVRSVVAGSRNSLAICQDGKLFTWG 1328
D T+ AWG+ E GQLG G+ + + ++ L+ + + AG +S A+ +G+++ WG
Sbjct: 219 DGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWG 278
Query: 1327 WNQRGTLGH-PPDTKTENVPSQVKALSTVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 1151
+ G LG D ++ VP +V+ L+ IVQ + GG H +A+ G +++G ++G+
Sbjct: 279 RGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGR 338
Query: 1150 CGEEPERKDDSSKPLRRDIVIP-------QRCAHKLSVRQVAAGGTHSVVL 1019
G RK + +P+ I +P + VA GG H++ +
Sbjct: 339 LGY--GRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKLVACGGRHTLAI 387
>ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Cucumis sativus]
Length = 390
Score = 686 bits (1769), Expect = 0.0
Identities = 325/381 (85%), Positives = 347/381 (91%), Gaps = 1/381 (0%)
Frame = -3
Query: 1504 TTVIAWGSGEDGQLGIGNNEEKEWVCSIKSLNSKNVRSVVAGSRNSLAICQDGKLFTWGW 1325
T +IAWGSGEDGQLG+GNNEE+EWVC+IK+L S+NV SVVAGSRNSLAI +DGKLFTWGW
Sbjct: 5 TAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGW 64
Query: 1324 NQRGTLGHPPDTKTENVPSQVKALSTVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 1145
NQRGTLGHP TK+ENVPSQVKALS VKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG
Sbjct: 65 NQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 1144 EEPERKDDSSKPLRRDIVIPQRCAHKLSVRQVAAGGTHSVVLTHEGHVWTWGQPWPPGDI 965
EEPE+KD++ +P RRDI IPQRCA KL VRQVAAGGTHSVVLT EGHVWTWGQPWPPGDI
Sbjct: 125 EEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI 184
Query: 964 KQISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGIGDTQPRSQPIPVH 785
QIS PVRVQGL+ V+LIAVGAFHNLAL EDG+LWAWGNNEYGQLG GDTQPRSQPIPV
Sbjct: 185 TQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQ 244
Query: 784 GLSELTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQKVQLLVGED 608
GLS LTLVDIAAGGWHSTALTD GEVYGWGRGEHGRLGFGD DKSSKMVPQKVQLL GE+
Sbjct: 245 GLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEE 304
Query: 607 IVQVSCGGTHSVALTKDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPINLPPPNSSDTEAE 428
IVQ+SCGGTHSVA+T DGRMFSFGRGDHGRLGYGRKVTTG P EVPI++PPP TE
Sbjct: 305 IVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGR-TE-N 362
Query: 427 GHWSAKLVACGGRHTLAIAEW 365
GHW AKLVACGGRHTLA+ +W
Sbjct: 363 GHWIAKLVACGGRHTLALVQW 383
Score = 87.4 bits (215), Expect = 9e-15
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Frame = -3
Query: 1507 DTTVIAWGSGEDGQLGIGNNEEKEWVCSIKSLNSKNVRSVVAGSRNSLAICQDGKLFTWG 1328
D T+ AWG+ E GQLG G+ + + ++ L+ + + AG +S A+ +G+++ WG
Sbjct: 215 DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWG 274
Query: 1327 WNQRGTLGHPPDTKTEN-VPSQVKALSTVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 1151
+ G LG + K+ VP +V+ LS +IVQ + GG H +AV GR +++G ++G+
Sbjct: 275 RGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGR 334
Query: 1150 CGEEPERKDDSSKPLRRDIVIPQRCAHKLS----VRQVAAGGTHSVVL 1019
G RK + +P I IP + + VA GG H++ L
Sbjct: 335 LGY--GRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLAL 380