BLASTX nr result

ID: Cnidium21_contig00003684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003684
         (1998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94910.1| unknown [Populus trichocarpa]                          390   e-106
ref|XP_003551419.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   382   e-103
gb|AFK45695.1| unknown [Medicago truncatula]                          373   e-100
ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
ref|XP_004139635.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   362   2e-97

>gb|ABK94910.1| unknown [Populus trichocarpa]
          Length = 469

 Score =  390 bits (1003), Expect = e-106
 Identities = 206/399 (51%), Positives = 249/399 (62%), Gaps = 7/399 (1%)
 Frame = +2

Query: 176  DSFVCCVCLDLLYKPIVLACGHVSCFWCVHRCMNGLRESHCPICRHPYHHFPTICQMLHF 355
            DSF C VCLDLLYKPIVL+CGH+SCFWCVH+ M+GLRES+CPICRHPY+HFPTICQMLHF
Sbjct: 35   DSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQMLHF 94

Query: 356  LLLKMYPITYKRRGTQTLEYEKSINCFSPEIKDPLHASNDSDKPNHPGDAGRLSPT---N 526
            LL K+YP+ Y RR  QTLE E  +  FSP+        N   K +HP D      +    
Sbjct: 95   LLFKLYPMVYTRREEQTLEEEMEMGFFSPQF--GYKECNSDLKHHHPRDRKHALDSCFFR 152

Query: 527  TIEHSSSVSSLGDGQAATNLEQQGFSPSFGGVCWNQLKEYSPEGVEVTNSHAVEEKLTSK 706
              E   S   +   ++ + ++    S     VC        P+ VE       E  L   
Sbjct: 153  NGEFCGSTQQIESVKSVSMIQAPTMSIP-NKVCDENCCMIKPDSVE-------ENNLPED 204

Query: 707  KYNGAHVRVSITDMLCVACSKLLYRPVVLNCGHVYCETCISIPADEKLRCQVCQSLHPNG 886
            K N    +VSI D+ C  C +LL+ PVVLNCGHVYCETCI  P +E L CQVCQSLHP G
Sbjct: 205  KSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNEMLTCQVCQSLHPRG 263

Query: 887  SPKVCLELHHFVEIQFPAEYELRRNTI--KQVDSQQEIP-TIRAVEADKQLDHLSFTPDE 1057
             PKVCLE  HF+E  FP EY +R   +  KQV  + + P T     ++K     S T  E
Sbjct: 264  FPKVCLEFDHFLEEYFPTEYAMRIEAVQAKQVPVKFQHPITCSTKASEKSFQSSSATTRE 323

Query: 1058 NFSPPW-GDHNVHVHFGVGCDFCGMYPIIGNRYRCKDCVEAIGFDLCGDCYNTRSKLPGR 1234
            N S  W  D +  VH GVGCD CG+YPI+G+RY+CKDCVE IGFDLCGDCYNT SK PGR
Sbjct: 324  NLS--WRADPHSKVHVGVGCDSCGVYPIVGDRYKCKDCVEEIGFDLCGDCYNTCSKRPGR 381

Query: 1235 FNQQHTPEHSFEVVGSNSIRSMILRLIRGQVEDGVAAPN 1351
            FNQQHT EH FE+V SN I +++LRL+ GQ++   A  N
Sbjct: 382  FNQQHTSEHKFELVKSNIIHNIMLRLVTGQLDSASAFAN 420


>ref|XP_003551419.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Glycine max]
          Length = 421

 Score =  382 bits (980), Expect = e-103
 Identities = 197/407 (48%), Positives = 259/407 (63%), Gaps = 2/407 (0%)
 Frame = +2

Query: 170  ICDSFVCCVCLDLLYKPIVLACGHVSCFWCVHRCMNGLRESHCPICRHPYHHFPTICQML 349
            I DSFVCCVCLDLLYKPIVL+CGH+ CFWCV+  MN LRES CP+CR+ Y+HFPT+CQ+L
Sbjct: 19   IPDSFVCCVCLDLLYKPIVLSCGHICCFWCVYNSMNCLRESQCPVCRNQYYHFPTVCQLL 78

Query: 350  HFLLLKMYPITYKRRGTQTLEYEKSINCFSPEIKDPLHASNDSDKPNHPGDAGRLSPTNT 529
            HFLLLK+Y   YKRR  QTLE EK    +SP+  DP        K  H G     S  N 
Sbjct: 79   HFLLLKIYTAAYKRRENQTLEEEKQSGFYSPQF-DP-DTCESQAKFGHSGIPSSSSNLNL 136

Query: 530  IEHSSSVSSLGDGQAATNLEQQGFSPSFGGVCWNQLKEYSPEGVEVTNSHAVEEKLTSKK 709
              +S +V +      +  LEQ G + + G    +    Y     ++  + A  +K+  ++
Sbjct: 137  TSNSCNVGT------SECLEQSGSAANEG----DDGTIYYDGESDIIGTPAKGKKMPQEE 186

Query: 710  YNGAHVRVSITDMLCVACSKLLYRPVVLNCGHVYCETCISIPADEKLRCQVCQSLHPNGS 889
             +    ++S+ D+ C  C +LL+ PVVLNCGHVYC+TC+    DE LRC+VCQS HP G 
Sbjct: 187  LS-VQRKLSVADVTCTMCKQLLFHPVVLNCGHVYCQTCVINIDDEMLRCKVCQSPHPRGL 245

Query: 890  PKVCLELHHFVEIQFPAEYELRRNTI--KQVDSQQEIPTIRAVEADKQLDHLSFTPDENF 1063
            PKVCLEL HF+E QFP EY  RR+ I  KQ+  + + P+  +++  K+++++ +      
Sbjct: 246  PKVCLELDHFLEEQFPEEYGQRRDAIELKQIKVKPDTPSSCSLDNGKRVENIDW------ 299

Query: 1064 SPPWGDHNVHVHFGVGCDFCGMYPIIGNRYRCKDCVEAIGFDLCGDCYNTRSKLPGRFNQ 1243
               W D +  VH GVGCDFCGM+PIIG+RYRC DC E +GFDLCGDCY +RSKLPGRFNQ
Sbjct: 300  ---WSDPDPKVHIGVGCDFCGMFPIIGDRYRCIDCKEKMGFDLCGDCYASRSKLPGRFNQ 356

Query: 1244 QHTPEHSFEVVGSNSIRSMILRLIRGQVEDGVAAPNLPEIDLENPEN 1384
            QHT EH F++V  N I +M+LRL   Q+ +G        IDLE+  N
Sbjct: 357  QHTSEHKFKLVPPNIIHNMMLRLATAQLGEG-------SIDLESIAN 396


>gb|AFK45695.1| unknown [Medicago truncatula]
          Length = 410

 Score =  373 bits (957), Expect = e-100
 Identities = 188/389 (48%), Positives = 241/389 (61%), Gaps = 1/389 (0%)
 Frame = +2

Query: 170  ICDSFVCCVCLDLLYKPIVLACGHVSCFWCVHRCMNGLRESHCPICRHPYHHFPTICQML 349
            I DSF CCVCLDLLYKPIVL+CGH+ CFWC+H+ M+G+RES CP CRH Y+HFPT+CQ+L
Sbjct: 18   IPDSFCCCVCLDLLYKPIVLSCGHMRCFWCIHKSMSGVRESKCPTCRHQYYHFPTVCQLL 77

Query: 350  HFLLLKMYPITYKRRGTQTLEYEKSINCFSPEIKDPLHASNDSDKPNHPGDAGRLSPTNT 529
            HFLLLK+YP+ Y RR  QTLE EK    +SP+            K  H       S  N 
Sbjct: 78   HFLLLKLYPVAYNRRTNQTLEEEKKSGYYSPQF--DFDTCESQAKFGHSCSPSSSSTINL 135

Query: 530  IEHSSSVSSLGDGQAATNLEQQGFSPSFGGVCWNQLKEYSPEGVEVTNSHAVEEKLTSKK 709
            + +SS+V +      +  ++Q G +P  G        E    G  V       + LT +K
Sbjct: 136  VSNSSNVGT------SECMDQPGSTPHEG--------EPEITGTRVEEKALPLDNLTQQK 181

Query: 710  YNGAHVRVSITDMLCVACSKLLYRPVVLNCGHVYCETCISIPADEKLRCQVCQSLHPNGS 889
                   +S+ D++C  C +LL+  VVL+CGHVYCETC+   ADE LRCQVCQ  HP G 
Sbjct: 182  -------ISVADVMCTMCKQLLFHHVVLHCGHVYCETCVYKLADEMLRCQVCQIPHPRGF 234

Query: 890  PKVCLELHHFVEIQFPAEYELRRNTIKQVDSQQEIPTIRAVEADKQLDHLSFTPDENFSP 1069
            PKVCLE  HF+E QFP EY  R + I+  D + +  T  +   D          ++  + 
Sbjct: 235  PKVCLEFDHFLEEQFPEEYAQRTDAIELKDVKLKPKTSSSCLLD--------NGNQGENM 286

Query: 1070 PW-GDHNVHVHFGVGCDFCGMYPIIGNRYRCKDCVEAIGFDLCGDCYNTRSKLPGRFNQQ 1246
             W  D +   HFGVGCDFCG+ PIIGNRY+C DC E IGFDLCGDCY++RSKLPGRFNQQ
Sbjct: 287  EWLSDPDSKAHFGVGCDFCGVLPIIGNRYKCNDCKEKIGFDLCGDCYDSRSKLPGRFNQQ 346

Query: 1247 HTPEHSFEVVGSNSIRSMILRLIRGQVED 1333
            HT +HSF++V  +  R+++LRLI GQ+ D
Sbjct: 347  HTSDHSFKLVEPDPRRNIMLRLITGQLGD 375


>ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  371 bits (953), Expect = e-100
 Identities = 195/375 (52%), Positives = 232/375 (61%), Gaps = 6/375 (1%)
 Frame = +2

Query: 176  DSFVCCVCLDLLYKPIVLACGHVSCFWCVHRCMNGLRESHCPICRHPYHHFPTICQMLHF 355
            DSF C VCLDLLYKPIVL+CGH+SCFWCVH+ M+GLRES+CPICRHPY+HFPTICQMLHF
Sbjct: 22   DSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQMLHF 81

Query: 356  LLLKMYPITYKRRGTQTLEYEKSINCFSPEIKDPLHASNDSDKPNHPGDAGRLSPT---N 526
            LL K+YP+ Y RR  QTLE E  +  FSP+        N   K +HP D      +    
Sbjct: 82   LLFKLYPMVYTRREEQTLEEEMEMGFFSPQF--GYKECNSDLKHHHPRDRKHALDSCFFR 139

Query: 527  TIEHSSSVSSLGDGQAATNLEQQGFSPSFGGVCWNQLKEYSPEGVEVTNSHAVEEKLTSK 706
              E   S   +   ++ + ++    S     VC        P+ VE       E  L   
Sbjct: 140  NGEFCGSTQQIESVKSVSMIQAPTMSIP-NKVCDENCCMIKPDSVE-------ENNLPED 191

Query: 707  KYNGAHVRVSITDMLCVACSKLLYRPVVLNCGHVYCETCISIPADEKLRCQVCQSLHPNG 886
            K N    +VSI D+ C  C +LL+ PVVLNCGHVYCETCI  P +E L CQVCQSLHP G
Sbjct: 192  KSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNEMLTCQVCQSLHPRG 250

Query: 887  SPKVCLELHHFVEIQFPAEYELRRNTI--KQVDSQQEIPTIRAVEADKQLDHLSFTPDEN 1060
             PKVCLE  HF+E  FP EY +R   +  KQ+     +P      ++K     S T  EN
Sbjct: 251  FPKVCLEFDHFLEEYFPTEYAMRIEAVQAKQLPLNHPLPG-STKASEKSFQSSSATTREN 309

Query: 1061 FSPPW-GDHNVHVHFGVGCDFCGMYPIIGNRYRCKDCVEAIGFDLCGDCYNTRSKLPGRF 1237
             S  W  D +  VH GVGCD CG+YPI+G+RY+CKDCVE IGFDLCGDCYNT SK PGRF
Sbjct: 310  LS--WRADPHSKVHVGVGCDSCGVYPIVGDRYKCKDCVEEIGFDLCGDCYNTCSKRPGRF 367

Query: 1238 NQQHTPEHSFEVVGS 1282
            NQQHT EH FE+V S
Sbjct: 368  NQQHTSEHKFELVKS 382


>ref|XP_004139635.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Cucumis sativus]
          Length = 359

 Score =  362 bits (929), Expect = 2e-97
 Identities = 180/378 (47%), Positives = 241/378 (63%), Gaps = 3/378 (0%)
 Frame = +2

Query: 176  DSFVCCVCLDLLYKPIVLACGHVSCFWCVHRCMNGLRESHCPICRHPYHHFPTICQMLHF 355
            D+F+CCVCLDLLYKPIVL CGH+SCFWCVH+CMNG RESHCPICR  Y+HFPTIC++LH 
Sbjct: 13   DAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEILHQ 72

Query: 356  LLLKMYPITYKRRGTQTLEYEKSINCFSPEIKDPLHASNDSDKPNHPGDAGRLSPTNTIE 535
            L+LK+YP +YKRR +Q LE EK I  FSP+       S    K  H  D+         +
Sbjct: 73   LILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLEDSANGELNTNTK 132

Query: 536  HSSSVSSLGDGQAATNLEQQGFSPSFGGVCWNQLKEYSPEGVEVTNSHAVEEKLTSKKYN 715
            +  +V+ L        LE+     S                  V + +++++    K  N
Sbjct: 133  NDDAVAEL-------ILEENSDVVS---------------STSVVSLNSLQDPCAQKTQN 170

Query: 716  GAHVRVSITDMLCVACSKLLYRPVVLNCGHVYCETCISIPADEKLRCQVCQSLHPNGSPK 895
                ++S+ D+LC AC++LL+RPVV+NCGHV+CE+CI+    E L CQVCQSL P G   
Sbjct: 171  --QEKISVADVLCQACTQLLFRPVVMNCGHVFCESCINSQV-ETLECQVCQSLQPRGFRN 227

Query: 896  VCLELHHFVEIQFPAEYELRRNTI--KQVDSQQ-EIPTIRAVEADKQLDHLSFTPDENFS 1066
            VCLEL  F++ +FP EY +RR+++  K  +S + + PT  + E  K+ ++L         
Sbjct: 228  VCLELDQFLKEKFPEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYL--------- 278

Query: 1067 PPWGDHNVHVHFGVGCDFCGMYPIIGNRYRCKDCVEAIGFDLCGDCYNTRSKLPGRFNQQ 1246
            P WGD    VH  +GCD+CGM+P+IG+RY+CKDC+EA GFDLCGDCYNTRSK PGRFNQQ
Sbjct: 279  PRWGDVASKVHTFIGCDYCGMFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQ 338

Query: 1247 HTPEHSFEVVGSNSIRSM 1300
            H PEH F++V  +  ++M
Sbjct: 339  HRPEHRFQLVHPSMFQNM 356


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