BLASTX nr result
ID: Cnidium21_contig00003643
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00003643
(1088 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|2... 399 e-109
ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243... 398 e-108
emb|CBI20080.3| unnamed protein product [Vitis vinifera] 398 e-108
ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ric... 375 e-101
ref|XP_003630434.1| Tyrosyl-DNA phosphodiesterase [Medicago trun... 347 4e-93
>ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|222858865|gb|EEE96412.1|
predicted protein [Populus trichocarpa]
Length = 1131
Score = 399 bits (1025), Expect = e-109
Identities = 198/322 (61%), Positives = 238/322 (73%), Gaps = 3/322 (0%)
Frame = +1
Query: 4 VSAICSLIASIQRPSGLWRLQEVLGHYKWPETFETDFMFGSSSIGSINAQFLAAFSASAG 183
V A CSL+ASIQR +G+WRL+EVLG YKWP++ ++DF++GSSSIGS+NAQFLAAFSA+AG
Sbjct: 811 VLAFCSLVASIQRCTGIWRLEEVLGQYKWPDSQQSDFIYGSSSIGSVNAQFLAAFSAAAG 870
Query: 184 KRSLQFSESEESDPDWGCWSISQELRNPSIKIIYPTIERVKSASCGILASKYLLCFSQKT 363
KRS + +SEESDP+WGCWS SQELRNPSIKII+PTIERVK+A GI S+ +LCFS+KT
Sbjct: 871 KRSPELFDSEESDPEWGCWSASQELRNPSIKIIFPTIERVKNACNGISPSRRILCFSEKT 930
Query: 364 WLRWRNVGMLHDAIPDPIERVGHPMHVKVGLRRFQSKTNASSCGWVYCGSHNFSAAAWGR 543
W R R+VG+LHDAIP P +RVG PMHVKV RRFQSKTNASS GWVYCGSHNFSAAAWGR
Sbjct: 931 WQRLRSVGILHDAIPHPYDRVGQPMHVKVARRRFQSKTNASSFGWVYCGSHNFSAAAWGR 990
Query: 544 PISN---IRSGVVGRTNAALGSRLHISNYEVGVVFIVPPPDALNYVNKTKESLDDIVLPF 714
ISN ++S G+TN L SRLH+SNYE+G++F PP + NK +LDDIVLPF
Sbjct: 991 LISNPFGLKSKETGKTNTYLSSRLHVSNYELGIIFTFPPTETKGITNKDCTNLDDIVLPF 1050
Query: 715 VIPAPKYKAIDRPATAKAMREALAEFTELEKQKYAQAXXXXXXXXXXXXXXXXXXXATDS 894
+PAPKY DRPATA+AM EA+AE LE+ + ATD
Sbjct: 1051 AVPAPKYGPTDRPATARAMSEAVAELAGLERDR----LIAEEMIEEIPDEEEEAVEATDY 1106
Query: 895 VPVEKEDDNTYAEQLWSQASQS 960
VEKE++ YAE LW+Q S
Sbjct: 1107 AAVEKEEEKAYAEMLWNQVDSS 1128
>ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243589 [Vitis vinifera]
Length = 1091
Score = 398 bits (1023), Expect = e-108
Identities = 200/326 (61%), Positives = 243/326 (74%), Gaps = 6/326 (1%)
Frame = +1
Query: 4 VSAICSLIASIQRPSGLWRLQEVLGHYKWPETFETDFMFGSSSIGS-INAQFLAAFSASA 180
+SAICSL+AS++R GLWRLQE+LG Y+WPE+ ETDF++GSSSIGS INAQFLAAFSA+A
Sbjct: 766 LSAICSLVASLKRCVGLWRLQEILGGYQWPESQETDFIYGSSSIGSSINAQFLAAFSAAA 825
Query: 181 GKRSLQFSESEESDPDWGCWSISQELRNPSIKIIYPTIERVKSASCGILASKYLLCFSQK 360
GKRSLQF ES+ESDP+WGCWS SQE R+PSIKI++PTIERVK++SCGIL S+ +LCFS+K
Sbjct: 826 GKRSLQFFESDESDPEWGCWSASQESRSPSIKIVFPTIERVKNSSCGILPSRRILCFSEK 885
Query: 361 TWLRWRNVGMLHDAIPDPIERVGHPMHVKVGLRRFQSKTNASSCGWVYCGSHNFSAAAWG 540
TW R +NV +HDAIP P +RV HPMHVKV RRFQSK ++SS GWVYCGSHNFSAAAWG
Sbjct: 886 TWQRLKNVSTIHDAIPHPSDRVKHPMHVKVAQRRFQSKMDSSSFGWVYCGSHNFSAAAWG 945
Query: 541 RPISN---IRSGVVGRTNAALGSRLHISNYEVGVVFIVPPPDALNYVNKTKESLDDIVLP 711
RPISN I++ + ++ RLHI NYE+G++FI PP N++ +LDD+VLP
Sbjct: 946 RPISNPFGIKTTGTHKADSCFDQRLHICNYELGIIFIFPPSATKGNGNQSSTNLDDVVLP 1005
Query: 712 FVIPAPKYKAIDRPATAKAMREALAEFTELEKQKYAQAXXXXXXXXXXXXXXXXXXXATD 891
FV+PAPKY DRPAT +AM EALAE TE E +K A TD
Sbjct: 1006 FVMPAPKYGPRDRPATTQAMTEALAELTEQEHEKLVAATNTEEMIEEELPDEEEAVEVTD 1065
Query: 892 SVPVEKEDDNTYAEQLWSQ--ASQSC 963
V EKE++ YAE LWSQ +SQSC
Sbjct: 1066 HVAEEKEEEKAYAELLWSQVDSSQSC 1091
>emb|CBI20080.3| unnamed protein product [Vitis vinifera]
Length = 1032
Score = 398 bits (1023), Expect = e-108
Identities = 200/326 (61%), Positives = 243/326 (74%), Gaps = 6/326 (1%)
Frame = +1
Query: 4 VSAICSLIASIQRPSGLWRLQEVLGHYKWPETFETDFMFGSSSIGS-INAQFLAAFSASA 180
+SAICSL+AS++R GLWRLQE+LG Y+WPE+ ETDF++GSSSIGS INAQFLAAFSA+A
Sbjct: 707 LSAICSLVASLKRCVGLWRLQEILGGYQWPESQETDFIYGSSSIGSSINAQFLAAFSAAA 766
Query: 181 GKRSLQFSESEESDPDWGCWSISQELRNPSIKIIYPTIERVKSASCGILASKYLLCFSQK 360
GKRSLQF ES+ESDP+WGCWS SQE R+PSIKI++PTIERVK++SCGIL S+ +LCFS+K
Sbjct: 767 GKRSLQFFESDESDPEWGCWSASQESRSPSIKIVFPTIERVKNSSCGILPSRRILCFSEK 826
Query: 361 TWLRWRNVGMLHDAIPDPIERVGHPMHVKVGLRRFQSKTNASSCGWVYCGSHNFSAAAWG 540
TW R +NV +HDAIP P +RV HPMHVKV RRFQSK ++SS GWVYCGSHNFSAAAWG
Sbjct: 827 TWQRLKNVSTIHDAIPHPSDRVKHPMHVKVAQRRFQSKMDSSSFGWVYCGSHNFSAAAWG 886
Query: 541 RPISN---IRSGVVGRTNAALGSRLHISNYEVGVVFIVPPPDALNYVNKTKESLDDIVLP 711
RPISN I++ + ++ RLHI NYE+G++FI PP N++ +LDD+VLP
Sbjct: 887 RPISNPFGIKTTGTHKADSCFDQRLHICNYELGIIFIFPPSATKGNGNQSSTNLDDVVLP 946
Query: 712 FVIPAPKYKAIDRPATAKAMREALAEFTELEKQKYAQAXXXXXXXXXXXXXXXXXXXATD 891
FV+PAPKY DRPAT +AM EALAE TE E +K A TD
Sbjct: 947 FVMPAPKYGPRDRPATTQAMTEALAELTEQEHEKLVAATNTEEMIEEELPDEEEAVEVTD 1006
Query: 892 SVPVEKEDDNTYAEQLWSQ--ASQSC 963
V EKE++ YAE LWSQ +SQSC
Sbjct: 1007 HVAEEKEEEKAYAELLWSQVDSSQSC 1032
>ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
gi|223550173|gb|EEF51660.1| tyrosyl-DNA
phosphodiesterase, putative [Ricinus communis]
Length = 1148
Score = 375 bits (962), Expect = e-101
Identities = 195/344 (56%), Positives = 239/344 (69%), Gaps = 24/344 (6%)
Frame = +1
Query: 4 VSAICSLIASIQRPSGLWRLQEVLGHYKWPETFETDFMFGSSSIGS-INAQFLAAFSASA 180
V A+CSL+ASIQR +GLWRLQEVL YKWPE ++DF++GSSSIGS INAQFL+AFSA+A
Sbjct: 806 VIAVCSLVASIQRCTGLWRLQEVLDQYKWPEVEQSDFIYGSSSIGSSINAQFLSAFSAAA 865
Query: 181 GKRSLQFSESEESDPDWGCWSISQELRNPSIKIIYPTIERVKSASCGILASKYLLCFSQK 360
GKRSLQ +SEESDP+WGCW+ SQELRNPSI+II+PTIERVK+A GIL+S+ +LCFS+
Sbjct: 866 GKRSLQLFDSEESDPEWGCWTKSQELRNPSIRIIFPTIERVKNACNGILSSRRILCFSEN 925
Query: 361 TWLRWRNVGMLHDAIPDPIERVGHPMHVK------------------VGLRRFQSKTNAS 486
TW R R+ +LHDA+P P +RVGHPMHVK V R FQSKT+ S
Sbjct: 926 TWQRLRSAEILHDAVPHPYDRVGHPMHVKWPLNILYTRETDRENCKQVARRCFQSKTDVS 985
Query: 487 SCGWVYCGSHNFSAAAWGRPISN---IRSGVVGRTNAALGSRLHISNYEVGVVFIVPPPD 657
S GWVYCGSHNFSAAAWGRPI + ++S G+TN + G RLH+ NYE+G++F+ PP
Sbjct: 986 SSGWVYCGSHNFSAAAWGRPICHPFGLKSNEPGKTNLSSGLRLHVCNYELGIIFVFPPSR 1045
Query: 658 ALNYVNKTKESLDDIVLPFVIPAPKYKAIDRPATAKAMREALAEFTELEKQKYAQAXXXX 837
NK +LDD+VLPFV+PAPKY D PAT KAMREAL E + E++K +
Sbjct: 1046 TKGIDNKDAATLDDVVLPFVVPAPKYGPTDWPATKKAMREALIELNDQEREKLVE-LANF 1104
Query: 838 XXXXXXXXXXXXXXXATDSVPVEKEDDNTYAEQLWSQ--ASQSC 963
AT V EKE++ YAE LWSQ +SQSC
Sbjct: 1105 EETTEEIPDEEEVVEATHYVVEEKEEEKAYAEMLWSQVASSQSC 1148
>ref|XP_003630434.1| Tyrosyl-DNA phosphodiesterase [Medicago truncatula]
gi|355524456|gb|AET04910.1| Tyrosyl-DNA phosphodiesterase
[Medicago truncatula]
Length = 1064
Score = 347 bits (889), Expect = 4e-93
Identities = 172/322 (53%), Positives = 223/322 (69%), Gaps = 3/322 (0%)
Frame = +1
Query: 4 VSAICSLIASIQRPSGLWRLQEVLGHYKWPETFETDFMFGSSSIGSINAQFLAAFSASAG 183
++A CSLIASIQR GLWRLQEVL Y+WPE+ E++ ++G+SSIGS+N++FLAAFSA+AG
Sbjct: 745 IAAFCSLIASIQRHYGLWRLQEVLNQYRWPESLESEIVYGASSIGSVNSKFLAAFSAAAG 804
Query: 184 KRSLQFSESEESDPDWGCWSISQELRNPSIKIIYPTIERVKSASCGILASKYLLCFSQKT 363
K+SLQ +SEESDP+WGCW+ +EL+NPS+KII+PTIERVKSA GIL S+ +LCFS++T
Sbjct: 805 KKSLQHFDSEESDPEWGCWNAREELKNPSVKIIFPTIERVKSAYNGILPSRRILCFSERT 864
Query: 364 WLRWRNVGMLHDAIPDPIERVGHPMHVKVGLRRFQSKTNASSCGWVYCGSHNFSAAAWGR 543
W R + + +LHDA+P P ERVGHPMH KV R F S+ A S GWVYCGSHNFSAAAWGR
Sbjct: 865 WQRLKTLDVLHDAVPHPHERVGHPMHTKVVRRCFWSRGEAPSIGWVYCGSHNFSAAAWGR 924
Query: 544 PISN---IRSGVVGRTNAALGSRLHISNYEVGVVFIVPPPDALNYVNKTKESLDDIVLPF 714
ISN ++ + + ++ S LHI NYE+G++F PP + LDDIVLP+
Sbjct: 925 QISNPFGTKADDPHKGDPSVNSGLHICNYELGIIFTFPPSENNECPKVKSTKLDDIVLPY 984
Query: 715 VIPAPKYKAIDRPATAKAMREALAEFTELEKQKYAQAXXXXXXXXXXXXXXXXXXXATDS 894
V+PAPKY ++D+PAT AMRE + E E E +K A+ +
Sbjct: 985 VVPAPKYGSLDKPATKLAMREVMTELAEREGEKQAE-----EEIMEEILEEEEEIEEINC 1039
Query: 895 VPVEKEDDNTYAEQLWSQASQS 960
V EKE++ YAE LWSQ S
Sbjct: 1040 VGEEKEEEKAYAEILWSQVDSS 1061