BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003616
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   201   8e-50
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...   198   7e-49
emb|CBL54154.1| hypothetical protein (mitochondrion) [Beta vulga...   197   9e-49
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]   197   1e-48
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   191   6e-47

>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score =  201 bits (511), Expect = 8e-50
 Identities = 100/198 (50%), Positives = 130/198 (65%)
 Frame = +2

Query: 2    PYKVCTKQKYMYFLTLVDDNSRMTWIYLLQNKSDYGATLHTFYNYVATHFHNSIKTIRTD 181
            P+ V T + Y YFLT+VDD+SR TWIYLLQ+KSD      TF N + T ++  IK++R D
Sbjct: 584  PFSVETLEGYKYFLTIVDDHSRATWIYLLQSKSDVLHIFPTFVNQIETQYNTKIKSVRRD 643

Query: 182  NAPEFSDQFCTKFMKEHGIVHRTTCSHRPPQNARVERKHRHMLEVARALKLQSGLPNSYW 361
            NAPE S    T+  KE GIV   +C     QN+ +ERKH+H+L VARAL  QS +P  YW
Sbjct: 644  NAPELS---FTELFKEKGIVSYHSCPETLEQNSVLERKHQHLLNVARALMFQSQVPLQYW 700

Query: 362  GDCILASACIINRIPSTVLNNVSPYEVLFRKAPDHNELKAFGCLVMATPPGVMTYKLKPR 541
            GDC+L +A +INR PS +L N SPYEVL  KAP +++L+ FGCL   +      +K  PR
Sbjct: 701  GDCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRTFGCLCYGSTSPKQRHKFMPR 760

Query: 542  VVPCVFVGYPAAKRGYKL 595
               CVF+GYP+  +GYKL
Sbjct: 761  SRACVFLGYPSGYKGYKL 778


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
            gi|7268152|emb|CAB78488.1| retrovirus-related like
            polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score =  198 bits (503), Expect = 7e-49
 Identities = 91/198 (45%), Positives = 130/198 (65%)
 Frame = +2

Query: 2    PYKVCTKQKYMYFLTLVDDNSRMTWIYLLQNKSDYGATLHTFYNYVATHFHNSIKTIRTD 181
            P+ + + + + YFLT+VDD +R TW+Y+L+NK D  +    F   V+T F+  IK IR+D
Sbjct: 643  PFSIESIEGFRYFLTVVDDCTRTTWVYMLRNKKDVSSVFPEFIKLVSTQFNAKIKAIRSD 702

Query: 182  NAPEFSDQFCTKFMKEHGIVHRTTCSHRPPQNARVERKHRHMLEVARALKLQSGLPNSYW 361
            NAPE      T+ +KEHG++H  +C++ P QN+ VERKH+H+L VARAL  QS +P  YW
Sbjct: 703  NAPELG---FTEIVKEHGMLHHFSCAYTPQQNSVVERKHQHILNVARALLFQSNIPMQYW 759

Query: 362  GDCILASACIINRIPSTVLNNVSPYEVLFRKAPDHNELKAFGCLVMATPPGVMTYKLKPR 541
             DC+  +  +INR+PS +LNN SPYE++  K PD++ LK FGCL   +       K  PR
Sbjct: 760  SDCVTTAVFLINRLPSPLLNNKSPYELILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPR 819

Query: 542  VVPCVFVGYPAAKRGYKL 595
               CVF+GYP+  +GYK+
Sbjct: 820  ARACVFLGYPSGYKGYKV 837


>emb|CBL54154.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 266

 Score =  197 bits (502), Expect = 9e-49
 Identities = 93/198 (46%), Positives = 128/198 (64%)
 Frame = +2

Query: 2   PYKVCTKQKYMYFLTLVDDNSRMTWIYLLQNKSDYGATLHTFYNYVATHFHNSIKTIRTD 181
           PYKV T+    YF+T+VDD SR+ W+ LL+ KSD    +  F   V T +   +K IR+D
Sbjct: 55  PYKVMTRTHCRYFMTIVDDYSRVIWVQLLKQKSDAYEAIKGFLKMVKTQYGKQVKVIRSD 114

Query: 182 NAPEFSDQFCTKFMKEHGIVHRTTCSHRPPQNARVERKHRHMLEVARALKLQSGLPNSYW 361
           NA EF D  C     + G+VH+T+C  RP QN R ERKHR++LE++RAL+ Q+GL   YW
Sbjct: 115 NAFEFEDNQCKALYADQGVVHQTSCVDRPQQNGRAERKHRNILEMSRALRFQAGLALKYW 174

Query: 362 GDCILASACIINRIPSTVLNNVSPYEVLFRKAPDHNELKAFGCLVMATPPGVMTYKLKPR 541
           GDC+ A+  I NR+P+ +LN +SPYEV+  K P+ + L+ FGCL MA  P     K + R
Sbjct: 175 GDCVQAAVHITNRLPTPLLNGLSPYEVMHNKKPNSSVLRTFGCLAMAYNPSRYKDKFEER 234

Query: 542 VVPCVFVGYPAAKRGYKL 595
            VPCV++G    ++GYKL
Sbjct: 235 GVPCVYLGNALNQKGYKL 252


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  197 bits (501), Expect = 1e-48
 Identities = 91/198 (45%), Positives = 131/198 (66%)
 Frame = +2

Query: 2    PYKVCTKQKYMYFLTLVDDNSRMTWIYLLQNKSDYGATLHTFYNYVATHFHNSIKTIRTD 181
            P+ + +   Y +FLT VDD +R TW++L++ K++  A L  F  YV THF+ +I+T+ +D
Sbjct: 573  PFSIPSYSXYXFFLTXVDDFTRFTWLFLMKTKTETXAILTNFLAYVHTHFNTNIQTLXSD 632

Query: 182  NAPEFSDQFCTKFMKEHGIVHRTTCSHRPPQNARVERKHRHMLEVARALKLQSGLPNSYW 361
            N  EF+      F +EHGI+H+ +C   P QN RVERKH+H+L VAR+L  QS LP SYW
Sbjct: 633  NGQEFN---MPTFYQEHGIIHQLSCVETPXQNGRVERKHQHLLNVARSLMFQSKLPLSYW 689

Query: 362  GDCILASACIINRIPSTVLNNVSPYEVLFRKAPDHNELKAFGCLVMATPPGVMTYKLKPR 541
             DC+L    +INR PS++LNN +PY++LF+K P++N  K FGCL  A+       K +PR
Sbjct: 690  TDCVLTXTHLINRTPSSILNNQTPYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKFQPR 749

Query: 542  VVPCVFVGYPAAKRGYKL 595
               C+F+GYP   +GYK+
Sbjct: 750  ATKCIFLGYPPNIKGYKV 767


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
            (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  191 bits (486), Expect = 6e-47
 Identities = 93/198 (46%), Positives = 125/198 (63%)
 Frame = +2

Query: 2    PYKVCTKQKYMYFLTLVDDNSRMTWIYLLQNKSDYGATLHTFYNYVATHFHNSIKTIRTD 181
            P+ V T   Y YFLT+VDD SR TW+YLL+NKSD    + TF   V   F  +IK +R+D
Sbjct: 473  PFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSD 532

Query: 182  NAPEFSDQFCTKFMKEHGIVHRTTCSHRPPQNARVERKHRHMLEVARALKLQSGLPNSYW 361
            NAPE +    T+F    GIV   +C   P QN+ VERKH+H+L VAR+L  QS +P SYW
Sbjct: 533  NAPELN---FTQFYHSKGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYW 589

Query: 362  GDCILASACIINRIPSTVLNNVSPYEVLFRKAPDHNELKAFGCLVMATPPGVMTYKLKPR 541
            GDCIL +  +INR+P+ +L +  P+EVL +  P ++ +K FGCL  A+      +K  PR
Sbjct: 590  GDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPR 649

Query: 542  VVPCVFVGYPAAKRGYKL 595
               C F+GYP+  +GYKL
Sbjct: 650  AKACAFIGYPSGFKGYKL 667