BLASTX nr result

ID: Cnidium21_contig00003588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003588
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146529.1| PREDICTED: 40S ribosomal protein S10-like is...   192   7e-47
gb|ABB55361.1| 40S ribosomal protein S10-like [Solanum tuberosum...   191   2e-46
ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [V...   191   2e-46
emb|CBI34383.3| unnamed protein product [Vitis vinifera]              191   2e-46
gb|ABB55398.1| 40S ribosomal protein S10-like [Solanum tuberosum]     191   2e-46

>ref|XP_004146529.1| PREDICTED: 40S ribosomal protein S10-like isoform 1 [Cucumis
           sativus] gi|449499925|ref|XP_004160956.1| PREDICTED: 40S
           ribosomal protein S10-like [Cucumis sativus]
          Length = 182

 Score =  192 bits (489), Expect = 7e-47
 Identities = 91/95 (95%), Positives = 94/95 (98%)
 Frame = +3

Query: 72  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 251
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 252 WMHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKAA 356
           WMHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKK A
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQA 95


>gb|ABB55361.1| 40S ribosomal protein S10-like [Solanum tuberosum]
           gi|82400160|gb|ABB72819.1| 40S ribosomal protein
           S10-like protein [Solanum tuberosum]
          Length = 180

 Score =  191 bits (486), Expect = 2e-46
 Identities = 90/95 (94%), Positives = 95/95 (100%)
 Frame = +3

Query: 72  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 251
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 252 WMHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKAA 356
           WMHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKK+A
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSA 95


>ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 180

 Score =  191 bits (486), Expect = 2e-46
 Identities = 90/94 (95%), Positives = 93/94 (98%)
 Frame = +3

Query: 72  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 251
           MII EKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 252 WMHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKA 353
           WMHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKK+
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 94


>emb|CBI34383.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  191 bits (486), Expect = 2e-46
 Identities = 93/106 (87%), Positives = 99/106 (93%), Gaps = 2/106 (1%)
 Frame = +3

Query: 42  IYFQPSLQAIMI--ISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQS 215
           I+F   L A++I  I EKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQS
Sbjct: 19  IFFSLFLWALLIRIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQS 78

Query: 216 FKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKA 353
           FKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKK+
Sbjct: 79  FKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 124


>gb|ABB55398.1| 40S ribosomal protein S10-like [Solanum tuberosum]
          Length = 182

 Score =  191 bits (485), Expect = 2e-46
 Identities = 91/95 (95%), Positives = 94/95 (98%)
 Frame = +3

Query: 72  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 251
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 252 WMHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKAA 356
           WMHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKK+A
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSA 95


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