BLASTX nr result

ID: Cnidium21_contig00003556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003556
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96040.1| unknown [Populus trichocarpa]                           82   9e-14
ref|XP_002298888.1| predicted protein [Populus trichocarpa] gi|1...    79   6e-13
ref|NP_193905.1| uncharacterized protein [Arabidopsis thaliana] ...    71   2e-10
ref|XP_003629917.1| hypothetical protein MTR_8g088330 [Medicago ...    71   2e-10
ref|XP_002869867.1| hypothetical protein ARALYDRAFT_914487 [Arab...    68   2e-09

>gb|ABK96040.1| unknown [Populus trichocarpa]
          Length = 162

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 54/126 (42%), Positives = 70/126 (55%), Gaps = 14/126 (11%)
 Frame = -2

Query: 509 LIILFILSVHSSGRELRPSDHGLTFQNT--STVTESPDATSFFGGTK-------SKVPLP 357
           +I++ I+   S  RELRPSDHGL +Q+   + V   PD   FFG +        S V LP
Sbjct: 20  IIVMIIIVQDSKARELRPSDHGLEYQSMPPTGVRFPPDMKQFFGASSAATSTSSSGVALP 79

Query: 356 EAKNLTDVTWRRSDGVRRESGG----VNKAWLVASLVCGVTGIALLSVAAFVFIF-RFQM 192
           +A N  D +W R+ G     GG    V    LVASLVCGVTG+ALL  +A +F F R + 
Sbjct: 80  KAMNSNDTSWWRAAGGGGGGGGGGDHVRHVLLVASLVCGVTGLALLVTSALIFYFMRHKN 139

Query: 191 ESKQSS 174
           +S  SS
Sbjct: 140 QSSPSS 145


>ref|XP_002298888.1| predicted protein [Populus trichocarpa] gi|118485886|gb|ABK94789.1|
           unknown [Populus trichocarpa]
           gi|222846146|gb|EEE83693.1| predicted protein [Populus
           trichocarpa]
          Length = 163

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 53/127 (41%), Positives = 68/127 (53%), Gaps = 15/127 (11%)
 Frame = -2

Query: 509 LIILFILSVHSSGRELRPSDHGLTFQNT--STVTESPDATSFFGGTK-------SKVPLP 357
           +I++ I+   S  RELRPSDHGL +Q+   + V   PD   FFG +        S V LP
Sbjct: 20  IIVMIIIVQDSKARELRPSDHGLEYQSMPPTGVRFPPDMKQFFGASSAATSTSSSGVALP 79

Query: 356 EAKNLTDVTWRRSDGVRRESGG-----VNKAWLVASLVCGVTGIALLSVAAFVFIF-RFQ 195
           +A N  D +W    G     GG     V    LVASLVCGVTG+ALL  +A +F F R +
Sbjct: 80  KAMNSNDTSWWSGGGGGGGGGGGGGDHVRHVLLVASLVCGVTGLALLVTSALIFYFMRHK 139

Query: 194 MESKQSS 174
            +S  SS
Sbjct: 140 NQSSPSS 146


>ref|NP_193905.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4455282|emb|CAB36818.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268971|emb|CAB81281.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|124301040|gb|ABN04772.1| At4g21740 [Arabidopsis
           thaliana] gi|332659096|gb|AEE84496.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 156

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 16/130 (12%)
 Frame = -2

Query: 515 PLLI-ILFILSVHSSGRELRPSDHGLTFQNTSTVTESPDAT----SFFGGTKSKVPLPEA 351
           PL I  L I + +S   ELRPSDHGL +Q +S  TES        SFFG + S  P P  
Sbjct: 17  PLTITFLVIFTGNSLAGELRPSDHGLQYQFSSPPTESHSPPGKMKSFFGDSHSSSPPPSH 76

Query: 350 KNLT-----------DVTWRRSDGVRRESGGVNKAWLVASLVCGVTGIALLSVAAFVFIF 204
             L            D  WR   G+RR+   +   +L AS++CGV+G+ALL V   ++ F
Sbjct: 77  PQLLPKATAADGGDDDSWWRDGAGIRRDHV-MRHVFLAASIICGVSGVALLVVFTLIYFF 135

Query: 203 RFQMESKQSS 174
           R++  +  +S
Sbjct: 136 RYRKHNHSNS 145


>ref|XP_003629917.1| hypothetical protein MTR_8g088330 [Medicago truncatula]
           gi|355523939|gb|AET04393.1| hypothetical protein
           MTR_8g088330 [Medicago truncatula]
           gi|388510852|gb|AFK43492.1| unknown [Medicago
           truncatula]
          Length = 158

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 16/130 (12%)
 Frame = -2

Query: 515 PLLIILFILSVHSSGRELRPSDHGLTFQNTST--VTESPDATSFFG--------GTKSKV 366
           P++ ++ IL+ +SS R+LRP+DHGL FQ  S      SP+  SFF          + S+V
Sbjct: 5   PIVFVILILAGYSSARDLRPADHGLIFQTLSPTGTHSSPEMRSFFNSDNSSPTVSSSSEV 64

Query: 365 PLPEA---KNLTDVTWRRSDGVRRESGGVNKAW---LVASLVCGVTGIALLSVAAFVFIF 204
            +P+A    N    +W    G     G  ++ W    VASL CGV G  L+ V+  +++F
Sbjct: 65  AMPKAFTSGNTAPPSWSSVSG----DGSSDRVWNSLKVASLACGVAGAILILVSGLIYVF 120

Query: 203 RFQMESKQSS 174
           +++ + +Q++
Sbjct: 121 KYRKQEQQNA 130


>ref|XP_002869867.1| hypothetical protein ARALYDRAFT_914487 [Arabidopsis lyrata subsp.
           lyrata] gi|297315703|gb|EFH46126.1| hypothetical protein
           ARALYDRAFT_914487 [Arabidopsis lyrata subsp. lyrata]
          Length = 154

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
 Frame = -2

Query: 539 FHFTYTTGPLLIILFILSVHSSGRELRPSDHGLTFQNTSTVTESPDAT----SFFGGTKS 372
           F FT T       L + + +S   ELRPSDHGL +Q +S  TES        SFFG + S
Sbjct: 16  FPFTIT------FLVLFTGNSLAGELRPSDHGLQYQFSSPPTESHSPPGKMKSFFGDSHS 69

Query: 371 KVPLPEAKNLTDVT----------WRRSDGVRRESGGVNKAWLVASLVCGVTGIALLSVA 222
             P   ++ L   T          WR   G RR+   +   +L AS++CGV+G+ALL V 
Sbjct: 70  SPPPSHSQLLPKATAADGGDDDSWWRDGAGYRRDHV-MRHVFLAASIICGVSGVALLVVF 128

Query: 221 AFVFIFRFQMESKQSS 174
             ++ FR++  +  +S
Sbjct: 129 TLIYFFRYRKHNHSNS 144


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