BLASTX nr result

ID: Cnidium21_contig00003539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003539
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532505.1| 40S ribosomal protein S11, putative [Ricinus...   280   3e-73
ref|XP_004138716.1| PREDICTED: 40S ribosomal protein S11-3-like ...   279   6e-73
ref|XP_004144894.1| PREDICTED: 40S ribosomal protein S11-3-like ...   278   1e-72
ref|NP_001238157.1| uncharacterized protein LOC100500186 [Glycin...   278   1e-72
gb|AFK38811.1| unknown [Lotus japonicus] gi|388522499|gb|AFK4931...   278   2e-72

>ref|XP_002532505.1| 40S ribosomal protein S11, putative [Ricinus communis]
           gi|223527780|gb|EEF29881.1| 40S ribosomal protein S11,
           putative [Ricinus communis]
          Length = 159

 Score =  280 bits (717), Expect = 3e-73
 Identities = 137/159 (86%), Positives = 143/159 (89%)
 Frame = +3

Query: 129 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFYKSVGLGFKTPREAIEGTYIDKKCP 308
           MAEQTEKAFLKQPKVFL S             NRF+KSVGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSVGLGFKTPREAIEGTYIDKKCP 60

Query: 309 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 488
           FTG VSIRGRILAGTCHSAKM+R+IIVRRNYLH++KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMMRSIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 489 GDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 605
           GDHV IGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTG+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGM 159


>ref|XP_004138716.1| PREDICTED: 40S ribosomal protein S11-3-like isoform 2 [Cucumis
           sativus] gi|449493335|ref|XP_004159259.1| PREDICTED: 40S
           ribosomal protein S11-3-like isoform 2 [Cucumis sativus]
          Length = 159

 Score =  279 bits (714), Expect = 6e-73
 Identities = 137/159 (86%), Positives = 141/159 (88%)
 Frame = +3

Query: 129 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFYKSVGLGFKTPREAIEGTYIDKKCP 308
           MAEQTEKAFLKQPKVFL S             NRF+KS+GLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 309 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 488
           FTG VSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHI+PCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHIAPCFRVKE 120

Query: 489 GDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 605
           GDHV IGQCRPLSKTVRFNVLKVIPAGSS GGKKAF GI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSAGGKKAFAGI 159


>ref|XP_004144894.1| PREDICTED: 40S ribosomal protein S11-3-like [Cucumis sativus]
           gi|449471994|ref|XP_004153463.1| PREDICTED: 40S
           ribosomal protein S11-3-like [Cucumis sativus]
           gi|449522568|ref|XP_004168298.1| PREDICTED: 40S
           ribosomal protein S11-3-like [Cucumis sativus]
          Length = 159

 Score =  278 bits (711), Expect = 1e-72
 Identities = 136/159 (85%), Positives = 140/159 (88%)
 Frame = +3

Query: 129 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFYKSVGLGFKTPREAIEGTYIDKKCP 308
           MAEQTEKAFLKQPKVFLCS             NRF+K++GLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGNKPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKKCP 60

Query: 309 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 488
           F G VSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 489 GDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 605
           GDHV IGQCRPLSKTVRFNVLKVIPAGSS  GKKAF GI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159


>ref|NP_001238157.1| uncharacterized protein LOC100500186 [Glycine max]
           gi|255629605|gb|ACU15150.1| unknown [Glycine max]
          Length = 159

 Score =  278 bits (711), Expect = 1e-72
 Identities = 133/159 (83%), Positives = 142/159 (89%)
 Frame = +3

Query: 129 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFYKSVGLGFKTPREAIEGTYIDKKCP 308
           MAEQTEKAFLKQPKVFLCS             NRF+KS+GLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 309 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 488
           FTG+VSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIP+HISPCFRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPSHISPCFRVKE 120

Query: 489 GDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 605
           GDHV IGQCRP+SKTVRFNVLKVIPAGSS G KKAFTG+
Sbjct: 121 GDHVIIGQCRPISKTVRFNVLKVIPAGSSSGAKKAFTGM 159


>gb|AFK38811.1| unknown [Lotus japonicus] gi|388522499|gb|AFK49311.1| unknown
           [Lotus japonicus]
          Length = 159

 Score =  278 bits (710), Expect = 2e-72
 Identities = 133/159 (83%), Positives = 142/159 (89%)
 Frame = +3

Query: 129 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFYKSVGLGFKTPREAIEGTYIDKKCP 308
           MAEQTEKAFLKQPKVFLCS             NRF+KS+GLGFKTPR+AIEG+YIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGSYIDKKCP 60

Query: 309 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 488
           FTG+VS+RGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGNVSVRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 489 GDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 605
           GDHV IGQCRPLSKTVRFNVLKV+PAGSSG  KKAFTGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVVPAGSSGAVKKAFTGI 159


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