BLASTX nr result
ID: Cnidium21_contig00003521
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00003521
(2150 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002330891.1| bromodomain protein [Populus trichocarpa] gi... 199 2e-48
ref|XP_002876536.1| hypothetical protein ARALYDRAFT_907533 [Arab... 197 1e-47
ref|XP_002512156.1| DNA binding protein, putative [Ricinus commu... 196 2e-47
ref|NP_181745.1| DNA-binding bromodomain-containing protein [Ara... 194 6e-47
ref|NP_181971.1| DNA-binding bromodomain-containing protein [Ara... 194 6e-47
>ref|XP_002330891.1| bromodomain protein [Populus trichocarpa] gi|222872713|gb|EEF09844.1|
bromodomain protein [Populus trichocarpa]
Length = 643
Score = 199 bits (507), Expect = 2e-48
Identities = 180/662 (27%), Positives = 300/662 (45%), Gaps = 49/662 (7%)
Frame = +3
Query: 129 EQSSIKQTSSSWGTWEELLLAFAVKRYGTSSWDSVSFEI-SKRCSTLTSLTPLNCMLRFN 305
E+ Q SWGTWEELLLA AVKR+G +WDSV+ E+ +K C T C ++
Sbjct: 5 EEDIHHQNQQSWGTWEELLLASAVKRHGFKNWDSVALELQTKTCLPHLLTTAQICQQKYL 64
Query: 306 HLKFRYK---------DHIPEDNY-------------------TPWLHDLRNRRIAELKN 401
L R+ +H PE++ PWL +LR R+AELK
Sbjct: 65 DLNRRFNTTTINNLHHNHTPEEDNQDEEQNNINTDIINNNIVSVPWLEELRKLRVAELKQ 124
Query: 402 QLEHYDLSIVSLQSKVKRLKEEREGSFR---GCDEKLGGKXXXXXXXXXXXXXXXXGGKD 572
+++ YD+SI++LQ KVK+L+EERE S + G EK K G++
Sbjct: 125 EVQRYDVSILTLQLKVKKLEEEREISVQEGDGNTEKPDLKADRLINEDEPGKPGSVSGEE 184
Query: 573 ENLEVRPENNMVRAESCNGSTDSISK---------ETGKMGMV------KREEEVGGDEL 707
+ E R N + + G D+++K +G+ V K +E GG
Sbjct: 185 SDPEDRSVNES-NSTASGGGEDAVAKLEEVEPVQGGSGEPDPVVSGSNRKALDEGGGGGG 243
Query: 708 VQLCEMVAESKKLGEIDSSDVQSTTSRLRKEENEKLCFGSGGGAGRENESLLLKQMSSVS 887
+ CE + ++ + S R E E++ G E++ +K S
Sbjct: 244 EESCEF---GDSVTQLSCESLNSGRKRKGSERKEEVSVTGG------EETVAVK-----S 289
Query: 888 QPLIEFLEILQSYKLGLVSERLLDSQETSNYRNLIRQHIDIKSVYRNVGGGCYSESEHKF 1067
+P++ FLE++++++ G + E LL+SQE Y+++IRQH+D++++ + G YS S+ F
Sbjct: 290 EPVVGFLEMIRAHRNGSLFESLLESQEMGVYKDMIRQHMDMEAIQAKLEQGSYSPSKLLF 349
Query: 1068 FRDLLLLVNNAILFFEKNTSESNDATELRQYILEKMAQRDSKADLSVGKQTSVPPILLLS 1247
FRDLLLL NNA++FF K++ ES A ++R ++++M + K+D ++V P + S
Sbjct: 350 FRDLLLLFNNALVFFPKHSVESLTAHKIRSLVMDEMRKDTQKSD------STVVPENIPS 403
Query: 1248 DQAQEPSDSWQLKSGIEGIIRVXXXXXXXXXXXXXXXXXXXXXXGLQAAAAAMHKPVVEY 1427
+E S L + + I + Q + +KPV +
Sbjct: 404 QPKRELERSDSLLAKHKSSIPIIVCRKRSSISAKPSSSSLGPKIEQQQQQSNENKPVNDL 463
Query: 1428 KRITKSPADTRRQITKRRTTNGSALNSRSSKKNSKDLVSTTCDEDPAMIISNQTQRKLES 1607
K P + + K ++ +RS+++ +K+L + P+ + K+ +
Sbjct: 464 K-----PPAVEQGLLKMKSEEKPVTGARSTRRGNKNLAKGS--TSPSKKQNTSPDTKVAA 516
Query: 1608 PTKPSQSKGEEKITAS--AEMARSAANFLDRLNQSSPPNNEPFIDVLKNSMCSPHXXXXX 1781
P K K E+K + E +SA +FL R+ ++SP + KN+
Sbjct: 517 PDKSETPKTEKKKNEALPLEKKKSAVDFLKRIKKNSP------AETPKNNNRGASSGGER 570
Query: 1782 XXXXXXXXXXXXXXXVTKSSCEAKLLNEESSLTRRQLGRPPKRAAAPTPVLAGSGKCSRA 1961
V K+S + K +ESS +++ +GRP K+AA + V SGK R
Sbjct: 571 KMEGSGGKGERGKERVLKNS-DKKQGKQESSPSKKNVGRPSKKAAEESRV---SGKRGRD 626
Query: 1962 IG 1967
G
Sbjct: 627 SG 628
>ref|XP_002876536.1| hypothetical protein ARALYDRAFT_907533 [Arabidopsis lyrata subsp.
lyrata] gi|297322374|gb|EFH52795.1| hypothetical protein
ARALYDRAFT_907533 [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 197 bits (500), Expect = 1e-47
Identities = 162/577 (28%), Positives = 257/577 (44%), Gaps = 48/577 (8%)
Frame = +3
Query: 126 DEQSSIKQTSSSWGTWEELLLAFAVKRYGTSSWDSVSFEISKRCSTLTSLTPLNCMLRFN 305
D+ ++ Q WGTW+EL+L AVKR+ S WDSV+ E+ R + ++ +NC L++
Sbjct: 40 DDNCNLNQIKQVWGTWDELVLTCAVKRHAFSDWDSVAKEVQARSRSSLIVSAVNCRLKYQ 99
Query: 306 HLKFRYKDHIP--------------EDNYTPWLHDLRNRRIAELKNQLEHYDLSIVSLQS 443
LK R++D + E PWL LR+ R+AEL+ +++ D SI+SLQ
Sbjct: 100 DLKRRFQDSVDVGEENSEAATAEEDEVGEIPWLEQLRSLRVAELRREVQRCDDSILSLQL 159
Query: 444 KVKRLKEEREGSFRGCDEKLGGKXXXXXXXXXXXXXXXXGGKDENLEVRPENNMVRAESC 623
KVK+L+EE++G D K K DE R ++
Sbjct: 160 KVKKLEEEKDGD--DGDNKPDLK------------------NDETKPARLNRETTESDRE 199
Query: 624 NGSTDSISKETGKMGMVKREEEVGGDELVQLCE------------------------MVA 731
+ + + S T + + + + GD++VQ E ++
Sbjct: 200 DNRSMNESNSTASVDKIADHDRLDGDKMVQADENSRNPDPDPVNKAAAPEEEERTVSKIS 259
Query: 732 ESKKLGEIDSSDVQSTTSRLRKEENEKLCFGSGGGAGRENESLLLKQMSSVSQPLIEFLE 911
E GE+D S T++ K + +K G GGG +K SQPLI+ ++
Sbjct: 260 EMSNSGELDES---GTSTGPGKRKGQKYRSGGGGGD--------IKSAGDKSQPLIDTIK 308
Query: 912 ILQSYKLGLVSERLLDSQETSNYRNLIRQHIDIKSVYRNVGGGCYSESEHKFFRDLLLLV 1091
+++S+ G V E L SQET +Y+ LIRQH+DIK++ + V G Y S F+RDL LL
Sbjct: 309 LIRSHPHGSVFESRLRSQETKDYKRLIRQHLDIKTIEKKVEKGSYVSSSLSFYRDLKLLF 368
Query: 1092 NNAILFFEKNTSESNDATELRQYILEKMAQRDSKADLSVGKQTSVPPILLLSDQAQEPSD 1271
NAI+FF ++SES A ELR + +M +R K+ +V K ++
Sbjct: 369 TNAIVFFPTSSSESMAAQELRTLVSNEMTKRTGKSGHNVIK---------------AEAE 413
Query: 1272 SWQLKSGIEGIIRVXXXXXXXXXXXXXXXXXXXXXXGLQAAAAAMHKPVVEYKRITKSPA 1451
S + KS + ++ +++A+ P ++ K
Sbjct: 414 SNEQKSSVLPLVACKK----------------------KSSASKKTPPSNSKQKDEKKSQ 451
Query: 1452 DTRRQITKRRTTNGSALNSRSSKKNSKDLVSTTCDEDPAMIISN---QTQRKLES----- 1607
+ + T TT SA RSS++ SK++ D +N Q K ES
Sbjct: 452 EVSEEKTATTTTTTSA---RSSRRTSKEIAVVAKDTKTGRAKNNNKKQKDTKTESSDDGD 508
Query: 1608 -PTKPSQSKGEEKITASA-EMARSAANFLDRLNQSSP 1712
K SK E+K A A + +S A+FL R+ ++SP
Sbjct: 509 DDEKEENSKTEKKTVAIATDKKKSVADFLKRIKKNSP 545
>ref|XP_002512156.1| DNA binding protein, putative [Ricinus communis]
gi|223548700|gb|EEF50190.1| DNA binding protein, putative
[Ricinus communis]
Length = 641
Score = 196 bits (498), Expect = 2e-47
Identities = 185/661 (27%), Positives = 293/661 (44%), Gaps = 47/661 (7%)
Frame = +3
Query: 108 KAMDKPDEQSSIKQTSSSWGTWEELLLAFAVKRYGTSSWDSVSFEISKRCSTLTSLTPL- 284
K + + Q+ ++ WGTWEELLLA AVKR+G +WDSVS E+ R S LT
Sbjct: 5 KQATRTETQNREEEAEERWGTWEELLLACAVKRHGFKNWDSVSMELQTRTSLPHFLTSAR 64
Query: 285 NCMLRFNHLKFRY----------KDHIPEDN-------YTPWLHDLRNRRIAELKNQLEH 413
NC +++ L R+ ++ E+N + PWL +LR R+AELK ++
Sbjct: 65 NCQQKYHDLHRRFTTSKNDFVQPQEEEDENNSNKVASIHIPWLEELRKLRVAELKQEVHR 124
Query: 414 YDLSIVSLQSKVKRLKEEREGSFRGCDEKLGGKXXXXXXXXXXXXXXXXGGKDENLEVRP 593
YD+SI SLQ KVKRL+EERE + D + K+E E
Sbjct: 125 YDISIHSLQLKVKRLEEEREKGNQNDDVTI-----------PDLEQPQSDKKEEEEEEEE 173
Query: 594 ENNMVRAESCNGS---------TDSISKETGKMGMVKR--EEEVGGDELVQLCEMVAESK 740
E+ + S + S ++S E K G+ K +E+ L ES
Sbjct: 174 ESEQKESVSGDESDRENRSVNESNSTGSEGEKKGVAKPSVQEDEEAPVLSGSSSKSVESH 233
Query: 741 KLGEID---SSDVQSTTS------RLRKEENEKLCFGSGGGAGRENESLLLKQMSSVSQP 893
+L + SS+VQS+ S R ++ E++ G G GR M S+P
Sbjct: 234 ELADSVTQLSSEVQSSASLGGKRKRKGRKRREEIAAGGDGIKGR---------MMVKSEP 284
Query: 894 LIEFLEILQSYKLGLVSERLLDSQETSNYRNLIRQHIDIKSVYRNVGGGCYSESEHKFFR 1073
LI LE ++++ + E L +QET Y+N+IRQH+D++++ + G YS S +R
Sbjct: 285 LIALLESIRAHNHASLFEGPLKTQETDVYKNMIRQHLDLETIQTKLEQGSYSSSNLLCYR 344
Query: 1074 DLLLLVNNAILFFEKNTSESNDATELRQYILEKMAQRDSKADLSVGKQTSVPPILLLSDQ 1253
DLLLL NNAI+FF K+++ES A ELR + +M + K + + Q +PP
Sbjct: 345 DLLLLFNNAIVFFSKSSNESTAAYELRSVVSNQMKKEIQKPEFTAVPQ-EIPP---QPKS 400
Query: 1254 AQEPSDSWQLKSGIEGIIRVXXXXXXXXXXXXXXXXXXXXXXGLQAAAAAMHKPVVEYKR 1433
+ SDS K I V +P + ++
Sbjct: 401 ELQKSDSLLAKHKASAPIVVCRKRSSLTAKPSPSSF---------GQKTEQQQPQQQQQQ 451
Query: 1434 I--TKSPADTR-----RQITKRRTTNGSALNSRSSKKNSKDLVSTTCDEDPAMIISNQTQ 1592
I + P+D++ + + K +RSS++++K+L T S T
Sbjct: 452 INDNEPPSDSKPPVVEQSLLKIEAKEKPVTGTRSSRRSNKNLAKGTTTPSKKQNASPTT- 510
Query: 1593 RKLESPTKPSQSKGEEKIT--ASAEMARSAANFLDRLNQSSPPNNEPFIDVLKNSMCSPH 1766
K+++ +P K E+K T + + RSAA+FL R+ ++SP KN+ S +
Sbjct: 511 -KVDTVDRPETPKTEKKKTEVLALDKKRSAADFLKRIKKNSPVET-----AKKNTRGSVN 564
Query: 1767 XXXXXXXXXXXXXXXXXXXXVTKSSCEAKLLNEESSLTRRQLGRPPKRAAAPTPVLAGSG 1946
V + + + K + EESS ++R +GRP K++ + V G
Sbjct: 565 GGMEWKKDNNTGKGEKGKERVLRKNGDEKQV-EESSPSKRNVGRPSKKSVEVSKVSGKRG 623
Query: 1947 K 1949
+
Sbjct: 624 R 624
>ref|NP_181745.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|2673907|gb|AAB88641.1| hypothetical protein
[Arabidopsis thaliana] gi|330254986|gb|AEC10080.1|
DNA-binding bromodomain-containing protein [Arabidopsis
thaliana]
Length = 631
Score = 194 bits (494), Expect = 6e-47
Identities = 139/385 (36%), Positives = 195/385 (50%), Gaps = 31/385 (8%)
Frame = +3
Query: 114 MDKPDEQSSIKQTSSSWGTWEELLLAFAVKRYGTSSWDSVSFEISKRCSTLTSLTPLNCM 293
M KP+ ++ + +W TWEELLLA AV R+GT SW+SVS EI K L SLT C
Sbjct: 1 MAKPENDVTLTE-KQTWSTWEELLLACAVHRHGTESWNSVSAEIQKLSPNLCSLTASACR 59
Query: 294 LRFNHLKFRYKDHIP------EDNYTPWLHDLRNRRIAELKNQLEHYDLSIVSLQSKVKR 455
++ LK R+ +P E + PWL +LR R+ EL+ ++E YDLSI +LQSKVK+
Sbjct: 60 HKYFDLKSRFTQELPVPESVAEISTAPWLEELRKLRVDELRREVEQYDLSISTLQSKVKQ 119
Query: 456 LKEEREGSF-------------RGCDEKLGGKXXXXXXXXXXXXXXXXGGKD---ENLEV 587
L+EERE SF R + G+ K+ EN E
Sbjct: 120 LEEEREMSFIKPDTETENLDLERKKERSDSGEPVPNPPVQLMNETISPDPKEIGSENTER 179
Query: 588 RPE--------NNMVRAESCNGSTDSISKETGKMGMVKREEEVGGDELVQLCEMVAESKK 743
E + + +SC GS +S+ KE +R E V EL++ +
Sbjct: 180 EEEMAGSGGGESKLAGEDSCRGSCESVEKEPTTNS--ERVEPVSVTELIES----EDGAS 233
Query: 744 LGEIDSSDVQSTTSRLRKEENEKLCFGSGGGAGRENES-LLLKQMSSVSQPLIEFLEILQ 920
GE +SDVQS+ S RK +E +E++S K + SQPLI F+EIL
Sbjct: 234 RGEEITSDVQSSASLPRKGTSEP---------DKEDQSPTSAKDFTVESQPLISFVEILL 284
Query: 921 SYKLGLVSERLLDSQETSNYRNLIRQHIDIKSVYRNVGGGCYSESEHKFFRDLLLLVNNA 1100
S+ G R L+ QET Y +IR+H+D + + + V GG Y FFRDLLLLVNNA
Sbjct: 285 SHPCGSHFSRRLERQETIEYGTIIREHVDFEIIRKRVEGGLYKSWRINFFRDLLLLVNNA 344
Query: 1101 ILFFEKNTSESNDATELRQYILEKM 1175
+F+ + +SE A +L Q + ++M
Sbjct: 345 RVFYHRGSSEFKFAEQLHQLVKKQM 369
>ref|NP_181971.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|3128185|gb|AAC16089.1| unknown protein [Arabidopsis
thaliana] gi|21539425|gb|AAM53265.1| unknown protein
[Arabidopsis thaliana] gi|32306497|gb|AAP78932.1|
At2g44430 [Arabidopsis thaliana]
gi|330255325|gb|AEC10419.1| DNA-binding
bromodomain-containing protein [Arabidopsis thaliana]
Length = 646
Score = 194 bits (494), Expect = 6e-47
Identities = 189/668 (28%), Positives = 283/668 (42%), Gaps = 54/668 (8%)
Frame = +3
Query: 126 DEQSSIKQTSSSWGTWEELLLAFAVKRYGTSSWDSVSFEISKRCSTLTSLTPLN-CMLRF 302
D ++ K + +WGTWEELLLA AVKR+G WDSV+ E+ R S L N C ++
Sbjct: 38 DNSNTKKSQTQAWGTWEELLLACAVKRHGFGDWDSVATEVRSRSSLSHLLASANDCRHKY 97
Query: 303 NHLKFRYKDHIPED----------------NYTPWLHDLRNRRIAELKNQLEHYDLSIVS 434
LK R+ + D N PWL LRN R+AEL+ ++E YD SI+S
Sbjct: 98 RDLKRRFHEQEKTDVTATVEEEEEEEERVGNNIPWLEQLRNLRVAELRREVERYDCSILS 157
Query: 435 LQSKVKRLKEEREGSFRGCDEKLGGKXXXXXXXXXXXXXXXXGGKDENLEVRPENNMVRA 614
LQ KVK+L+EERE +G + G + E+ E V A
Sbjct: 158 LQLKVKKLEEERE---------VGEEKPDLENERKEERSENDGSESEHRE-----KAVSA 203
Query: 615 ESCNGSTDSISKETGKMGMVKREEEVGGDELVQLCEMVAESKKLGEIDSSDVQSTTSRLR 794
+ + E+ EE V GDE Q E + + K + D + +T +
Sbjct: 204 AEESDRENRSMNESNSTATAGEEERVCGDEPSQTREDDSGNDKNPDPDPVNKDATAA--- 260
Query: 795 KEENEKLCFGS------------------------GGGAGRENESLLLKQMSSVSQPLIE 902
+EE + GS GGAG ++ S SQPLI
Sbjct: 261 EEEEGSVSRGSEASHSDELGESGTSESKWKRKRRKQGGAGE------IRSAESKSQPLIS 314
Query: 903 FLEILQSYKLGLVSERLLDSQETSNYRNLIRQHIDIKSVYRNVGGGCYSESEHKFFRDLL 1082
L++++S+ G + ER L SQE +Y+++++QH+DI+++ R + G Y S F+RDL
Sbjct: 315 LLDLIRSHPRGSLFERRLRSQEAKDYKSMVKQHLDIETIQRKLKQGSYDSSSLIFYRDLQ 374
Query: 1083 LLVNNAILFFEKNTSESNDATELRQYILEKMAQRDSKADLSVGKQTSVPPILLLSDQAQ- 1259
LL NAI+FF ++SES A ELR + ++M + KA + KQ + + S +A
Sbjct: 375 LLFTNAIVFFPLSSSESMAAHELRAVVSQEMRKETGKAGPRLIKQEASG---MRSGKADA 431
Query: 1260 EPSDSWQLKSGIEGIIRVXXXXXXXXXXXXXXXXXXXXXXGLQAAAAAMHKPVVEYKRIT 1439
E SDS + G + V + + +A P +
Sbjct: 432 ETSDSSLSRQKSSGPLVVCKK---------------------RRSVSAKASP----SSSS 466
Query: 1440 KSPADTRRQITKRRTTNGSALNSRSSKKNSKDLVSTTCDEDPAMIISNQTQRKLESPTKP 1619
S D ++ T + A RSS++ +K V+ + Q++ ES T
Sbjct: 467 FSQKDDTKEETLSEEKDNIATGVRSSRRANK--VAAVVANNTKTGKGRNKQKQTESKTNS 524
Query: 1620 SQSKGE-------EKITASAEMARSAANFLDRLNQSSP-----PNNEPFIDVLKNSMCSP 1763
S EK T SA+ +S A+FL RL ++SP N+ +V K+S P
Sbjct: 525 SNDNSSKQDTGKTEKKTVSADKKKSVADFLKRLKKNSPQKEAKDQNKSGGNVKKDSKTKP 584
Query: 1764 HXXXXXXXXXXXXXXXXXXXXVTKSSCEAKLLNEESSLTRRQLGRPPKRAAAPTPVLAGS 1943
+ SS K E++ +R GRP K+ A T + S
Sbjct: 585 R-------------------ELRSSSVGKKKAEVENTPVKRAPGRPQKKTAEAT--ASAS 623
Query: 1944 GKCSRAIG 1967
GK R G
Sbjct: 624 GKRGRDTG 631