BLASTX nr result

ID: Cnidium21_contig00003487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003487
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arab...   138   2e-30
ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus c...   136   5e-30
ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...   136   6e-30
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]   136   6e-30
gb|AFK49439.1| unknown [Lotus japonicus]                              132   9e-29

>ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
           lyrata] gi|297314994|gb|EFH45417.1| hypothetical protein
           ARALYDRAFT_491238 [Arabidopsis lyrata subsp. lyrata]
          Length = 144

 Score =  138 bits (347), Expect = 2e-30
 Identities = 66/78 (84%), Positives = 72/78 (92%)
 Frame = +1

Query: 286 GIMKPRPVSPEMQAVVGVPEIPRTQALKLIWAYIKENNLQDPENKKIIICDEKLKKIFKG 465
           GIMKPRPVSPEMQ VVGVPEIPRTQALK IWAYIKE++LQDP+NK+ IICDEKLKKIF+G
Sbjct: 67  GIMKPRPVSPEMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDIICDEKLKKIFEG 126

Query: 466 NERVGFLEVAGLISPHFL 519
            ERVGFLE+A LI PHFL
Sbjct: 127 KERVGFLEIAKLIGPHFL 144


>ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223542031|gb|EEF43575.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 141

 Score =  136 bits (343), Expect = 5e-30
 Identities = 67/78 (85%), Positives = 70/78 (89%)
 Frame = +1

Query: 286 GIMKPRPVSPEMQAVVGVPEIPRTQALKLIWAYIKENNLQDPENKKIIICDEKLKKIFKG 465
           GIMKPR VSPEM  +VG  EIPRTQALK IWA+IKENNLQDPENKKIIICDEKLKKIF G
Sbjct: 63  GIMKPRRVSPEMAELVGASEIPRTQALKRIWAHIKENNLQDPENKKIIICDEKLKKIFGG 122

Query: 466 NERVGFLEVAGLISPHFL 519
            +RVGFLEVAGLISPHFL
Sbjct: 123 RDRVGFLEVAGLISPHFL 140


>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score =  136 bits (342), Expect = 6e-30
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = +1

Query: 286 GIMKPRPVSPEMQAVVGVPEIPRTQALKLIWAYIKENNLQDPENKKIIICDEKLKKIFKG 465
           GIMKPR +SPEMQ  +GVPEIPRTQALK IWAYIK++NLQDPENKKII+CDEKLK IF G
Sbjct: 67  GIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAG 126

Query: 466 NERVGFLEVAGLISPHFL 519
            +RVGFLE+AGLI+PHFL
Sbjct: 127 KDRVGFLEIAGLINPHFL 144


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score =  136 bits (342), Expect = 6e-30
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = +1

Query: 286 GIMKPRPVSPEMQAVVGVPEIPRTQALKLIWAYIKENNLQDPENKKIIICDEKLKKIFKG 465
           GIMKPR +SPEMQ  +GVPEIPRTQALK IWAYIK++NLQDPENKKII+CDEKLK IF G
Sbjct: 67  GIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAG 126

Query: 466 NERVGFLEVAGLISPHFL 519
            +RVGFLE+AGLI+PHFL
Sbjct: 127 KDRVGFLEIAGLINPHFL 144


>gb|AFK49439.1| unknown [Lotus japonicus]
          Length = 132

 Score =  132 bits (332), Expect = 9e-29
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = +1

Query: 286 GIMKPRPVSPEMQAVVGVPEIPRTQALKLIWAYIKENNLQDPENKKIIICDEKLKKIFKG 465
           GIMKPR +SPEMQ++ GVPEI RTQALK IWAYIKENNLQDPENKK+I CDEKLKK+F G
Sbjct: 54  GIMKPRKISPEMQSICGVPEISRTQALKHIWAYIKENNLQDPENKKLIRCDEKLKKVFAG 113

Query: 466 NERVGFLEVAGLISPHFL 519
            + VG L++AGLISPHFL
Sbjct: 114 KDEVGMLQIAGLISPHFL 131


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