BLASTX nr result

ID: Cnidium21_contig00003469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003469
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031527.1| Tim17 domain-containing protein [Arabidopsis...    94   2e-17
gb|AFK46999.1| unknown [Lotus japonicus]                               94   2e-17
ref|XP_002879973.1| atoep16-3 [Arabidopsis lyrata subsp. lyrata]...    94   2e-17
ref|NP_565968.1| Tim17 domain-containing protein [Arabidopsis th...    94   2e-17
ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycin...    92   5e-17

>ref|NP_001031527.1| Tim17 domain-containing protein [Arabidopsis thaliana]
           gi|330254993|gb|AEC10087.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
          Length = 173

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/75 (65%), Positives = 52/75 (69%)
 Frame = -3

Query: 548 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDXXXXXXXXXXX 369
           VPRVER VALPGLIRTLKMMG HG TFAAIGGVYIGVEQLV N+R+KRD           
Sbjct: 57  VPRVERNVALPGLIRTLKMMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVA 116

Query: 368 XXXXXXLKGRSIPTA 324
                  + RSIPTA
Sbjct: 117 GASVLGYRARSIPTA 131


>gb|AFK46999.1| unknown [Lotus japonicus]
          Length = 162

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/75 (66%), Positives = 51/75 (68%)
 Frame = -3

Query: 548 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDXXXXXXXXXXX 369
           VPRVER VALPGLIRT KMMGNHG TFAAIGGVYIGVEQLV N+R KRD           
Sbjct: 46  VPRVERNVALPGLIRTFKMMGNHGLTFAAIGGVYIGVEQLVQNFRGKRDLVNGAVGGFVA 105

Query: 368 XXXXXXLKGRSIPTA 324
                  KGRSI TA
Sbjct: 106 GAAILGYKGRSISTA 120


>ref|XP_002879973.1| atoep16-3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325812|gb|EFH56232.1| atoep16-3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 173

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/75 (65%), Positives = 52/75 (69%)
 Frame = -3

Query: 548 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDXXXXXXXXXXX 369
           VPRVER VALPGLIRTLKMMG HG TFAAIGGVYIGVEQLV N+R+KRD           
Sbjct: 57  VPRVERNVALPGLIRTLKMMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVA 116

Query: 368 XXXXXXLKGRSIPTA 324
                  + RSIPTA
Sbjct: 117 GASVLGYRARSIPTA 131


>ref|NP_565968.1| Tim17 domain-containing protein [Arabidopsis thaliana]
           gi|79324887|ref|NP_001031528.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
           gi|79324889|ref|NP_001031529.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
           gi|75098427|sp|O48528.1|OP163_ARATH RecName: Full=Outer
           envelope pore protein 16-3, chloroplastic/mitochondrial;
           AltName: Full=Chloroplastic outer envelope pore protein
           of 16 kDa 3; Short=AtOEP16-3; Short=OEP16-3; AltName:
           Full=Mitochondrial complex I subunit B14.7
           gi|2673912|gb|AAB88646.1| expressed protein [Arabidopsis
           thaliana] gi|21555741|gb|AAM63925.1| unknown
           [Arabidopsis thaliana] gi|88698118|gb|ABD48955.1|
           At2g42210 [Arabidopsis thaliana]
           gi|98961103|gb|ABF59035.1| At2g42210 [Arabidopsis
           thaliana] gi|330254992|gb|AEC10086.1| Tim17
           domain-containing protein [Arabidopsis thaliana]
           gi|330254994|gb|AEC10088.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
           gi|330254995|gb|AEC10089.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
          Length = 159

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/75 (65%), Positives = 52/75 (69%)
 Frame = -3

Query: 548 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDXXXXXXXXXXX 369
           VPRVER VALPGLIRTLKMMG HG TFAAIGGVYIGVEQLV N+R+KRD           
Sbjct: 43  VPRVERNVALPGLIRTLKMMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVA 102

Query: 368 XXXXXXLKGRSIPTA 324
                  + RSIPTA
Sbjct: 103 GASVLGYRARSIPTA 117


>ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycine max]
           gi|255627053|gb|ACU13871.1| unknown [Glycine max]
          Length = 160

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 49/75 (65%), Positives = 51/75 (68%)
 Frame = -3

Query: 548 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDXXXXXXXXXXX 369
           VPRVER VALPGLIRT KMMGN+G TFAAIGGVYIGVEQLV NYR KRD           
Sbjct: 44  VPRVERNVALPGLIRTFKMMGNYGLTFAAIGGVYIGVEQLVQNYRMKRDLVNGAVGGFVA 103

Query: 368 XXXXXXLKGRSIPTA 324
                  +GRSI TA
Sbjct: 104 GATILGYRGRSIKTA 118


Top