BLASTX nr result

ID: Cnidium21_contig00003468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003468
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031527.1| Tim17 domain-containing protein [Arabidopsis...   127   1e-27
ref|NP_565968.1| Tim17 domain-containing protein [Arabidopsis th...   127   1e-27
ref|XP_004136578.1| PREDICTED: outer envelope pore protein 16-3,...   125   4e-27
ref|XP_002879973.1| atoep16-3 [Arabidopsis lyrata subsp. lyrata]...   125   5e-27
ref|XP_002532339.1| protein translocase, putative [Ricinus commu...   125   6e-27

>ref|NP_001031527.1| Tim17 domain-containing protein [Arabidopsis thaliana]
           gi|330254993|gb|AEC10087.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
          Length = 173

 Score =  127 bits (320), Expect = 1e-27
 Identities = 69/115 (60%), Positives = 74/115 (64%)
 Frame = -3

Query: 567 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDFVNXXXXXXXX 388
           VPRVER VALPGLIRTLKMMG HG TFAAIGGVYIGVEQLV N+R+KRDF N        
Sbjct: 57  VPRVERNVALPGLIRTLKMMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVA 116

Query: 387 XXXXXXXXXRSIPXXXXXXXXXXXXXXXIDWGGQTTRIDNGKEYYPYTTKKRPSA 223
                    RSIP               ID GGQTTR+DNG+EYYPYT +KR  A
Sbjct: 117 GASVLGYRARSIPTAIAAGATLAVTSALIDSGGQTTRVDNGREYYPYTVEKRAEA 171


>ref|NP_565968.1| Tim17 domain-containing protein [Arabidopsis thaliana]
           gi|79324887|ref|NP_001031528.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
           gi|79324889|ref|NP_001031529.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
           gi|75098427|sp|O48528.1|OP163_ARATH RecName: Full=Outer
           envelope pore protein 16-3, chloroplastic/mitochondrial;
           AltName: Full=Chloroplastic outer envelope pore protein
           of 16 kDa 3; Short=AtOEP16-3; Short=OEP16-3; AltName:
           Full=Mitochondrial complex I subunit B14.7
           gi|2673912|gb|AAB88646.1| expressed protein [Arabidopsis
           thaliana] gi|21555741|gb|AAM63925.1| unknown
           [Arabidopsis thaliana] gi|88698118|gb|ABD48955.1|
           At2g42210 [Arabidopsis thaliana]
           gi|98961103|gb|ABF59035.1| At2g42210 [Arabidopsis
           thaliana] gi|330254992|gb|AEC10086.1| Tim17
           domain-containing protein [Arabidopsis thaliana]
           gi|330254994|gb|AEC10088.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
           gi|330254995|gb|AEC10089.1| Tim17 domain-containing
           protein [Arabidopsis thaliana]
          Length = 159

 Score =  127 bits (320), Expect = 1e-27
 Identities = 69/115 (60%), Positives = 74/115 (64%)
 Frame = -3

Query: 567 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDFVNXXXXXXXX 388
           VPRVER VALPGLIRTLKMMG HG TFAAIGGVYIGVEQLV N+R+KRDF N        
Sbjct: 43  VPRVERNVALPGLIRTLKMMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVA 102

Query: 387 XXXXXXXXXRSIPXXXXXXXXXXXXXXXIDWGGQTTRIDNGKEYYPYTTKKRPSA 223
                    RSIP               ID GGQTTR+DNG+EYYPYT +KR  A
Sbjct: 103 GASVLGYRARSIPTAIAAGATLAVTSALIDSGGQTTRVDNGREYYPYTVEKRAEA 157


>ref|XP_004136578.1| PREDICTED: outer envelope pore protein 16-3,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449501899|ref|XP_004161489.1| PREDICTED: outer
           envelope pore protein 16-3,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 158

 Score =  125 bits (315), Expect = 4e-27
 Identities = 68/112 (60%), Positives = 73/112 (65%)
 Frame = -3

Query: 567 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDFVNXXXXXXXX 388
           VPRVER VALPGL+RTLK+MGN+G TFAAIGGVYIGVEQL+ NYR KRDFVN        
Sbjct: 43  VPRVERNVALPGLVRTLKIMGNYGMTFAAIGGVYIGVEQLLQNYRMKRDFVNGAVGGFTA 102

Query: 387 XXXXXXXXXRSIPXXXXXXXXXXXXXXXIDWGGQTTRIDNGKEYYPYTTKKR 232
                    +SI                ID GGQTTRID GKEYYPYTTKKR
Sbjct: 103 GASVLGYKGKSISTALSAGAALAFTSSVIDIGGQTTRIDTGKEYYPYTTKKR 154


>ref|XP_002879973.1| atoep16-3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325812|gb|EFH56232.1| atoep16-3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 173

 Score =  125 bits (314), Expect = 5e-27
 Identities = 68/115 (59%), Positives = 73/115 (63%)
 Frame = -3

Query: 567 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDFVNXXXXXXXX 388
           VPRVER VALPGLIRTLKMMG HG TFAAIGGVYIGVEQLV N+R+KRDF N        
Sbjct: 57  VPRVERNVALPGLIRTLKMMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVA 116

Query: 387 XXXXXXXXXRSIPXXXXXXXXXXXXXXXIDWGGQTTRIDNGKEYYPYTTKKRPSA 223
                    RSIP               ID GGQTTR+D G+EYYPYT +KR  A
Sbjct: 117 GASVLGYRARSIPTAIAAGATLAVTSALIDSGGQTTRVDTGREYYPYTVEKRAEA 171


>ref|XP_002532339.1| protein translocase, putative [Ricinus communis]
           gi|223527956|gb|EEF30041.1| protein translocase,
           putative [Ricinus communis]
          Length = 159

 Score =  125 bits (313), Expect = 6e-27
 Identities = 68/112 (60%), Positives = 74/112 (66%)
 Frame = -3

Query: 567 VPRVERRVALPGLIRTLKMMGNHGATFAAIGGVYIGVEQLVLNYRTKRDFVNXXXXXXXX 388
           VPRVE+ VALPGLIRT+KMMGN+G TFAAIGGVYIGVEQL+ ++R KRDFVN        
Sbjct: 43  VPRVEKHVALPGLIRTVKMMGNYGLTFAAIGGVYIGVEQLIQHFRMKRDFVNGTVGGFVA 102

Query: 387 XXXXXXXXXRSIPXXXXXXXXXXXXXXXIDWGGQTTRIDNGKEYYPYTTKKR 232
                    RSI                ID GGQTTRIDNGKEYYPYTTKKR
Sbjct: 103 GASVIGFKGRSISTAMSAGAALAVTSALIDAGGQTTRIDNGKEYYPYTTKKR 154


Top