BLASTX nr result

ID: Cnidium21_contig00003437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003437
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ92201.1| predicted protein [Hordeum vulgare subsp. vulgar...    60   6e-07
ref|NP_001051462.1| Os03g0782200 [Oryza sativa Japonica Group] g...    57   4e-06

>dbj|BAJ92201.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326534224|dbj|BAJ89462.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 224

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = -1

Query: 583 PYFPTIPNFPYVTSLP--PSISQVPALPTIPTPLFPGSLSPITSPIPGVPGF-YPPINTM 413
           P  PT+P  P V ++P  P++  VP +PT+P P  PG++ P    +PGVP    P + T+
Sbjct: 90  PTVPTVPTIPTVPTVPGVPTVPTVPGVPTVPLPAVPGAVVPTVPTVPGVPTLPLPSMPTI 149

Query: 412 PGFPSFFGPP 383
           PG P+   PP
Sbjct: 150 PGLPNVPLPP 159


>ref|NP_001051462.1| Os03g0782200 [Oryza sativa Japonica Group]
           gi|108711397|gb|ABF99192.1| expressed protein [Oryza
           sativa Japonica Group] gi|113549933|dbj|BAF13376.1|
           Os03g0782200 [Oryza sativa Japonica Group]
           gi|215697271|dbj|BAG91265.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222625911|gb|EEE60043.1| hypothetical protein
           OsJ_12827 [Oryza sativa Japonica Group]
          Length = 236

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 29/70 (41%), Positives = 36/70 (51%)
 Frame = -1

Query: 583 PYFPTIPNFPYVTSLPPSISQVPALPTIPTPLFPGSLSPITSPIPGVPGFYPPINTMPGF 404
           P  P IP  P V ++ P+I  +P +PTIP     GS  P    IPGVP   P I T+PG 
Sbjct: 86  PTIPAIPTIPGVPAVGPTIPTIPTIPTIPGVPAVGSTIPTIPTIPGVPAVGPTIPTIPGV 145

Query: 403 PSFFGPPQAP 374
           P+    P  P
Sbjct: 146 PTIPTVPGVP 155


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