BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003403
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26017.3| unnamed protein product [Vitis vinifera]              456   e-126
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   456   e-126
ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   439   e-121
ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   432   e-119
ref|XP_003609879.1| tRNA pseudouridine synthase family protein [...   424   e-116

>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  456 bits (1174), Expect = e-126
 Identities = 224/327 (68%), Positives = 253/327 (77%)
 Frame = -1

Query: 1210 SEHSYKWRLLIAYDGTRFSGWQYQKSPPTIQCLIEQALTQVTKLERKDLCLVGASRTDAG 1031
            S   YKWRL+IAY+GTR+SGWQYQ+SPPTIQC++E+ALT+ TKLER+DL LVGASRTD G
Sbjct: 41   SASGYKWRLVIAYEGTRYSGWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTG 100

Query: 1030 VHAWGQVAHFFTPFNYDSLESAHAAMNGLLPPDIRVREFSAALPEFHARFSVSSKIYTYK 851
            VHAWGQVAHF TPFNYD LES HAA+NGLLPPDIRVRE S A+PEFHARFSV SKI    
Sbjct: 101  VHAWGQVAHFLTPFNYDGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKI---- 156

Query: 850  IYNDATMDPFQRHYAYHSTYKLNTAAIKEAARFFVXIYTYKIYNDATMDPFQRHYAYHST 671
                                                 Y YKIYNDA MDPF RHY YHS 
Sbjct: 157  -------------------------------------YHYKIYNDAVMDPFLRHYVYHSV 179

Query: 670  YKLNTAAIKEAARFFVGEHNFSSFVNTSRTSYSPNPVKNILRFDVIEMGPLLQLEVEGSG 491
            YKLNT A++EAA+ F G+H+FS+FVN S    SPNPVKNI RFDV EMG LLQLEVEGSG
Sbjct: 180  YKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVEGSG 239

Query: 490  FLYRQVRNMVALLLQIGREAIPPDIVPKILASCDRRELAKYALAAPPHGLCLVNIKYNEK 311
            FLYRQVRNMVALLLQIGREAIPP+IVP ILA+ DR+ELAKYAL+APPHGLCL+++KYNE+
Sbjct: 240  FLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSVKYNEE 299

Query: 310  HLQLPAGCPPSSFGRHHTIRKCKLPCF 230
            HLQLP+GCP +S GRHHT+RKCKLP +
Sbjct: 300  HLQLPSGCPATSHGRHHTVRKCKLPFY 326


>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
          Length = 336

 Score =  456 bits (1174), Expect = e-126
 Identities = 224/327 (68%), Positives = 253/327 (77%)
 Frame = -1

Query: 1210 SEHSYKWRLLIAYDGTRFSGWQYQKSPPTIQCLIEQALTQVTKLERKDLCLVGASRTDAG 1031
            S   YKWRL+IAY+GTR+SGWQYQ+SPPTIQC++E+ALT+ TKLER+DL LVGASRTD G
Sbjct: 51   SASGYKWRLVIAYEGTRYSGWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTG 110

Query: 1030 VHAWGQVAHFFTPFNYDSLESAHAAMNGLLPPDIRVREFSAALPEFHARFSVSSKIYTYK 851
            VHAWGQVAHF TPFNYD LES HAA+NGLLPPDIRVRE S A+PEFHARFSV SKI    
Sbjct: 111  VHAWGQVAHFLTPFNYDGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKI---- 166

Query: 850  IYNDATMDPFQRHYAYHSTYKLNTAAIKEAARFFVXIYTYKIYNDATMDPFQRHYAYHST 671
                                                 Y YKIYNDA MDPF RHY YHS 
Sbjct: 167  -------------------------------------YHYKIYNDAVMDPFLRHYVYHSV 189

Query: 670  YKLNTAAIKEAARFFVGEHNFSSFVNTSRTSYSPNPVKNILRFDVIEMGPLLQLEVEGSG 491
            YKLNT A++EAA+ F G+H+FS+FVN S    SPNPVKNI RFDV EMG LLQLEVEGSG
Sbjct: 190  YKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVEGSG 249

Query: 490  FLYRQVRNMVALLLQIGREAIPPDIVPKILASCDRRELAKYALAAPPHGLCLVNIKYNEK 311
            FLYRQVRNMVALLLQIGREAIPP+IVP ILA+ DR+ELAKYAL+APPHGLCL+++KYNE+
Sbjct: 250  FLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSVKYNEE 309

Query: 310  HLQLPAGCPPSSFGRHHTIRKCKLPCF 230
            HLQLP+GCP +S GRHHT+RKCKLP +
Sbjct: 310  HLQLPSGCPATSHGRHHTVRKCKLPFY 336


>ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 309

 Score =  439 bits (1130), Expect = e-121
 Identities = 215/324 (66%), Positives = 248/324 (76%), Gaps = 1/324 (0%)
 Frame = -1

Query: 1198 YKWRLLIAYDGTRFSGWQYQKSPPTIQCLIEQALTQVTKLERKDLCLVGASRTDAGVHAW 1019
            YKWRL++AYDGT+++GWQYQ+SPPT+QC +E+ALT+ TKL+RKD CLVGASRTDAGVHAW
Sbjct: 26   YKWRLVLAYDGTKYAGWQYQQSPPTVQCTLEKALTRATKLQRKDFCLVGASRTDAGVHAW 85

Query: 1018 GQVAHFFTPFNYDSLESAHAAMNGLLPPDIRVREFSAALPEFHARFSVSSKIYTYKIYND 839
            GQVAHFFTPFNYD+LE  HAA+NGLLP DIRVRE S A  EFHARFS  SKI        
Sbjct: 86   GQVAHFFTPFNYDNLEELHAALNGLLPTDIRVREISPASAEFHARFSAISKI-------- 137

Query: 838  ATMDPFQRHYAYHSTYKLNTAAIKEAARFFVXIYTYKIYNDATMDPFQRHYAYHSTYKLN 659
                                             Y YKIYNDA MDPFQRH+AYHS YKLN
Sbjct: 138  ---------------------------------YHYKIYNDAIMDPFQRHFAYHSVYKLN 164

Query: 658  TAAIKEAARFFVGEHNFSSFVNTSRTSYSPNPVKNILRFDVIEMGPLLQLEVEGSGFLYR 479
            +A ++EAA++FVG+H+FS+F N S     P+PVK++ RFD+ EMG LLQ+EVEGSGFLYR
Sbjct: 165  SAVMREAAKYFVGKHDFSAFANASNNDGVPDPVKHVFRFDLKEMGALLQIEVEGSGFLYR 224

Query: 478  QVRNMVALLLQIGREAIPPDIVPKILASCDRRELAKYALAAPPHGLCLVNIKYNEKHLQL 299
            QVRNMVALLLQIGREAIPPDIVP ILAS DR+ELAKY+L+APPHGLCLV+I YNE HL  
Sbjct: 225  QVRNMVALLLQIGREAIPPDIVPHILASRDRKELAKYSLSAPPHGLCLVSINYNESHLLP 284

Query: 298  PAGCPP-SSFGRHHTIRKCKLPCF 230
            P GCPP +SFGRHHTIRKCK+P F
Sbjct: 285  PPGCPPANSFGRHHTIRKCKVPFF 308


>ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 327

 Score =  432 bits (1111), Expect = e-119
 Identities = 214/330 (64%), Positives = 246/330 (74%), Gaps = 1/330 (0%)
 Frame = -1

Query: 1216 KQSEHSYKWRLLIAYDGTRFSGWQYQKSPPTIQCLIEQALTQVTKLERKDLCLVGASRTD 1037
            K  +  YKWR+++AYDGT+++GWQYQ+SPPT+QC +E+ALTQ TKL+RKDLCLVGASRTD
Sbjct: 38   KLIQDGYKWRIVLAYDGTQYAGWQYQESPPTVQCTVEKALTQATKLQRKDLCLVGASRTD 97

Query: 1036 AGVHAWGQVAHFFTPFNYDSLESAHAAMNGLLPPDIRVREFSAALPEFHARFSVSSKIYT 857
            AGVHAWGQVAHFFTPFNYD+LE  HAA+NGLLP DIR+RE S A  EFHARFS  SKIY 
Sbjct: 98   AGVHAWGQVAHFFTPFNYDNLEQLHAALNGLLPTDIRIREISPASAEFHARFSAKSKIYH 157

Query: 856  YKIYNDATMDPFQRHYAYHSTYKLNTAAIKEAARFFVXIYTYKIYNDATMDPFQRHYAYH 677
            YKIYNDA MDPFQRH+AYHS YKLN+A ++EAA +FV                       
Sbjct: 158  YKIYNDAIMDPFQRHFAYHSVYKLNSAVMREAATYFV----------------------- 194

Query: 676  STYKLNTAAIKEAARFFVGEHNFSSFVNTSRTSYSPNPVKNILRFDVIEMGPLLQLEVEG 497
                              G+H+FS+F N S     P+PVK++ RFD+ EMG LLQLEVEG
Sbjct: 195  ------------------GKHDFSAFANASHNDRVPDPVKHVFRFDLKEMGALLQLEVEG 236

Query: 496  SGFLYRQVRNMVALLLQIGREAIPPDIVPKILASCDRRELAKYALAAPPHGLCLVNIKYN 317
            SGFLYRQVRNMVALLLQIGREAIPPDIVP ILAS DR+ELAKY+L APPHGLCLV+I YN
Sbjct: 237  SGFLYRQVRNMVALLLQIGREAIPPDIVPHILASRDRKELAKYSLPAPPHGLCLVSINYN 296

Query: 316  EKHLQLPAGCPP-SSFGRHHTIRKCKLPCF 230
            E HL  P   PP +SFGRH TIRKCK+P F
Sbjct: 297  ESHLLPPPESPPANSFGRHQTIRKCKVPFF 326


>ref|XP_003609879.1| tRNA pseudouridine synthase family protein [Medicago truncatula]
            gi|355510934|gb|AES92076.1| tRNA pseudouridine synthase
            family protein [Medicago truncatula]
          Length = 322

 Score =  424 bits (1090), Expect = e-116
 Identities = 209/328 (63%), Positives = 242/328 (73%)
 Frame = -1

Query: 1222 EEKQSEHSYKWRLLIAYDGTRFSGWQYQKSPPTIQCLIEQALTQVTKLERKDLCLVGASR 1043
            E K ++  YKWRLL++YDGTR++GWQYQ+SPPT+QC +E+AL + TKL+RKDL LVGASR
Sbjct: 34   EVKPNQDGYKWRLLLSYDGTRYAGWQYQESPPTVQCAVEKALIRATKLQRKDLQLVGASR 93

Query: 1042 TDAGVHAWGQVAHFFTPFNYDSLESAHAAMNGLLPPDIRVREFSAALPEFHARFSVSSKI 863
            TDAGVHAWGQVAHF TPFNYD+L+S HAA+NGLLP DIRVRE S A  EFHARFSV SKI
Sbjct: 94   TDAGVHAWGQVAHFLTPFNYDNLDSVHAALNGLLPSDIRVREISPASAEFHARFSVKSKI 153

Query: 862  YTYKIYNDATMDPFQRHYAYHSTYKLNTAAIKEAARFFVXIYTYKIYNDATMDPFQRHYA 683
            Y YKIY+D  MDPFQRH+AYH+ YKLN+AA++EAAR+F                      
Sbjct: 154  YHYKIYSDTIMDPFQRHFAYHNMYKLNSAAMREAARYF---------------------- 191

Query: 682  YHSTYKLNTAAIKEAARFFVGEHNFSSFVNTSRTSYSPNPVKNILRFDVIEMGPLLQLEV 503
                               +G+H+F++F N S     P+PVK+I RFDV EMG LLQLEV
Sbjct: 192  -------------------IGKHDFTAFENASHNDRIPDPVKHIFRFDVKEMGALLQLEV 232

Query: 502  EGSGFLYRQVRNMVALLLQIGREAIPPDIVPKILASCDRRELAKYALAAPPHGLCLVNIK 323
            EGSGFLYRQVRNMVALLLQIG+EA PPDIVP ILAS DR+ELAKY    PPHGLCLV+I 
Sbjct: 233  EGSGFLYRQVRNMVALLLQIGKEATPPDIVPHILASRDRKELAKYCYYLPPHGLCLVSIN 292

Query: 322  YNEKHLQLPAGCPPSSFGRHHTIRKCKL 239
            YNE HL  P GCP  SFG HHTIRKCK+
Sbjct: 293  YNESHLLPPPGCPAKSFGMHHTIRKCKV 320