BLASTX nr result

ID: Cnidium21_contig00003395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003395
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313362.1| predicted protein [Populus trichocarpa] gi|2...   308   7e-82
ref|XP_004154684.1| PREDICTED: nuclear cap-binding protein subun...   306   2e-81
ref|XP_004139050.1| PREDICTED: nuclear cap-binding protein subun...   306   2e-81
gb|AFN07652.1| cap-binding protein 80 [Solanum tuberosum]             295   5e-78
gb|ACN43588.1| nuclear cap-binding protein [Solanum tuberosum]        295   6e-78

>ref|XP_002313362.1| predicted protein [Populus trichocarpa] gi|222849770|gb|EEE87317.1|
            predicted protein [Populus trichocarpa]
          Length = 787

 Score =  308 bits (789), Expect = 7e-82
 Identities = 160/239 (66%), Positives = 192/239 (80%), Gaps = 2/239 (0%)
 Frame = -1

Query: 713  SAEDA-DKTEV-ALSAEIKGMVKGRKTAREVIVWMDENVVPVHGLDVAVKVIVHTLLDIG 540
            S ED  +KTE  ALSAE+   VK R+TARE+I W++E+VVP HG DVA+KV+VHTLL+IG
Sbjct: 407  SIEDGREKTEQHALSAELNNKVKARQTAREIISWVEESVVPNHGWDVALKVVVHTLLEIG 466

Query: 539  SKSFTHLITVLERYGQVIAKICPDQEKQILLIDEVNFFWKKSTQMTALTIDRMMGYRLIS 360
            SKSFTHLITVLERYGQV A+ICPD +KQ++LI EV+ +WK + QMTA+ IDRMMGYRLIS
Sbjct: 467  SKSFTHLITVLERYGQVFARICPDHDKQVMLIAEVSSYWKNNAQMTAIAIDRMMGYRLIS 526

Query: 359  NLAIVRWVFSPANVELFHTSDRLWEILRNAINKTYNRISDLRKEISILKTNVLSAEKRAS 180
            NLAIVRWVFSPAN+E FHTSDR WE+LRNAI+KTYNRISDLR EIS LK +V+SAE+ A+
Sbjct: 527  NLAIVRWVFSPANIEQFHTSDRPWEVLRNAISKTYNRISDLRNEISSLKKSVVSAEEAAT 586

Query: 179  ESQAELNAAEGKLALVDGEPVLGENPVRMXXXXXXXXXXXXXXXXXXXSLEAKEALLAR 3
            +++ EL+AAE KL+LVDGEPVLG+NP R+                   SLEAKEALLAR
Sbjct: 587  KAKTELDAAESKLSLVDGEPVLGDNPARLKRLKANAEKAKEEEVSVHESLEAKEALLAR 645


>ref|XP_004154684.1| PREDICTED: nuclear cap-binding protein subunit 1-like [Cucumis
            sativus]
          Length = 921

 Score =  306 bits (785), Expect = 2e-81
 Identities = 157/236 (66%), Positives = 191/236 (80%), Gaps = 1/236 (0%)
 Frame = -1

Query: 707  EDADKTEV-ALSAEIKGMVKGRKTAREVIVWMDENVVPVHGLDVAVKVIVHTLLDIGSKS 531
            +D +K+E  ALSAE+  MVKGR  ARE+I W+DE+V+P HGLDV++ V+V TLLDIGSKS
Sbjct: 548  DDGEKSEQHALSAELYNMVKGRAPARELISWLDESVIPKHGLDVSLVVVVQTLLDIGSKS 607

Query: 530  FTHLITVLERYGQVIAKICPDQEKQILLIDEVNFFWKKSTQMTALTIDRMMGYRLISNLA 351
            FTHLITVLERYGQVI++IC DQ+KQ+LLI EV  +WK +TQMTA+ IDRMMGYRLISNL+
Sbjct: 608  FTHLITVLERYGQVISRICHDQDKQVLLISEVGSYWKNNTQMTAIAIDRMMGYRLISNLS 667

Query: 350  IVRWVFSPANVELFHTSDRLWEILRNAINKTYNRISDLRKEISILKTNVLSAEKRASESQ 171
            IV+W+FSP N++L+HTSDR WEILRNA+ KTYNRISDLRKEIS LK +V++AE+ A+ +Q
Sbjct: 668  IVKWIFSPENLQLYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDVVAAEEAAARTQ 727

Query: 170  AELNAAEGKLALVDGEPVLGENPVRMXXXXXXXXXXXXXXXXXXXSLEAKEALLAR 3
             EL+AAE KL+LVDGEPVLGENPVR+                   SLEAKEALLAR
Sbjct: 728  EELSAAESKLSLVDGEPVLGENPVRLKRLKSYAGRAKEQEISIRDSLEAKEALLAR 783


>ref|XP_004139050.1| PREDICTED: nuclear cap-binding protein subunit 1-like [Cucumis
            sativus]
          Length = 864

 Score =  306 bits (785), Expect = 2e-81
 Identities = 157/236 (66%), Positives = 191/236 (80%), Gaps = 1/236 (0%)
 Frame = -1

Query: 707  EDADKTEV-ALSAEIKGMVKGRKTAREVIVWMDENVVPVHGLDVAVKVIVHTLLDIGSKS 531
            +D +K+E  ALSAE+  MVKGR  ARE+I W+DE+V+P HGLDV++ V+V TLLDIGSKS
Sbjct: 491  DDGEKSEQHALSAELYNMVKGRAPARELISWLDESVIPKHGLDVSLVVVVQTLLDIGSKS 550

Query: 530  FTHLITVLERYGQVIAKICPDQEKQILLIDEVNFFWKKSTQMTALTIDRMMGYRLISNLA 351
            FTHLITVLERYGQVI++IC DQ+KQ+LLI EV  +WK +TQMTA+ IDRMMGYRLISNL+
Sbjct: 551  FTHLITVLERYGQVISRICHDQDKQVLLISEVGSYWKNNTQMTAIAIDRMMGYRLISNLS 610

Query: 350  IVRWVFSPANVELFHTSDRLWEILRNAINKTYNRISDLRKEISILKTNVLSAEKRASESQ 171
            IV+W+FSP N++L+HTSDR WEILRNA+ KTYNRISDLRKEIS LK +V++AE+ A+ +Q
Sbjct: 611  IVKWIFSPENLQLYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDVVAAEEAAARTQ 670

Query: 170  AELNAAEGKLALVDGEPVLGENPVRMXXXXXXXXXXXXXXXXXXXSLEAKEALLAR 3
             EL+AAE KL+LVDGEPVLGENPVR+                   SLEAKEALLAR
Sbjct: 671  EELSAAESKLSLVDGEPVLGENPVRLKRLKSYAGRAKEQEISIRDSLEAKEALLAR 726


>gb|AFN07652.1| cap-binding protein 80 [Solanum tuberosum]
          Length = 861

 Score =  295 bits (756), Expect = 5e-78
 Identities = 154/238 (64%), Positives = 183/238 (76%), Gaps = 1/238 (0%)
 Frame = -1

Query: 713  SAEDA-DKTEVALSAEIKGMVKGRKTAREVIVWMDENVVPVHGLDVAVKVIVHTLLDIGS 537
            SAED  D TE ALS E+K MVKGRKTARE+I W++ENV P HG D+ + V+V TLLDIGS
Sbjct: 488  SAEDGTDPTERALSLELKDMVKGRKTAREMISWVEENVFPAHGFDITLGVVVQTLLDIGS 547

Query: 536  KSFTHLITVLERYGQVIAKICPDQEKQILLIDEVNFFWKKSTQMTALTIDRMMGYRLISN 357
            KSFTHLITVLERYGQVIAK+C D ++Q+ LI EV+ +W+ S QMTA+ IDRMM YRLISN
Sbjct: 548  KSFTHLITVLERYGQVIAKMCTDDDQQVKLIMEVSSYWQNSAQMTAIAIDRMMSYRLISN 607

Query: 356  LAIVRWVFSPANVELFHTSDRLWEILRNAINKTYNRISDLRKEISILKTNVLSAEKRASE 177
            LAIVRWVFSP N++ FH SD  WEILRNA++KTYNRISDLRKEIS L+ +V+ AE+ AS 
Sbjct: 608  LAIVRWVFSPLNLDRFHVSDSPWEILRNAVSKTYNRISDLRKEISSLERSVVLAERAASR 667

Query: 176  SQAELNAAEGKLALVDGEPVLGENPVRMXXXXXXXXXXXXXXXXXXXSLEAKEALLAR 3
            +  EL +AE KL+++DGEPVLGENPVR+                   SLEAKEALLAR
Sbjct: 668  AGEELESAESKLSVIDGEPVLGENPVRIKRLKSYAEKAKEEEVSVRESLEAKEALLAR 725


>gb|ACN43588.1| nuclear cap-binding protein [Solanum tuberosum]
          Length = 861

 Score =  295 bits (755), Expect = 6e-78
 Identities = 153/238 (64%), Positives = 183/238 (76%), Gaps = 1/238 (0%)
 Frame = -1

Query: 713  SAEDA-DKTEVALSAEIKGMVKGRKTAREVIVWMDENVVPVHGLDVAVKVIVHTLLDIGS 537
            SAED  D TE ALS E+K MVKGRKTARE+I W++ENV P HG D+ + V+V TLLDIGS
Sbjct: 488  SAEDGTDPTERALSLELKDMVKGRKTAREMISWVEENVFPAHGFDITLGVVVQTLLDIGS 547

Query: 536  KSFTHLITVLERYGQVIAKICPDQEKQILLIDEVNFFWKKSTQMTALTIDRMMGYRLISN 357
            KSFTHLITVLERYGQVIAK+C D ++Q+ LI EV+ +W+ S QMTA+ IDRMM YRLISN
Sbjct: 548  KSFTHLITVLERYGQVIAKMCTDDDQQVKLIMEVSSYWQNSAQMTAIAIDRMMSYRLISN 607

Query: 356  LAIVRWVFSPANVELFHTSDRLWEILRNAINKTYNRISDLRKEISILKTNVLSAEKRASE 177
            LAIVRWVFSP N++ FH SD  WEILRNA++KTYNRISDLRKEIS L+ +++ AE+ AS 
Sbjct: 608  LAIVRWVFSPLNLDRFHVSDSPWEILRNAVSKTYNRISDLRKEISSLERSIVLAERAASR 667

Query: 176  SQAELNAAEGKLALVDGEPVLGENPVRMXXXXXXXXXXXXXXXXXXXSLEAKEALLAR 3
            +  EL +AE KL+++DGEPVLGENPVR+                   SLEAKEALLAR
Sbjct: 668  AGEELESAESKLSVIDGEPVLGENPVRIKRLKSYAEKAKEEEVSVRESLEAKEALLAR 725


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