BLASTX nr result

ID: Cnidium21_contig00003393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003393
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265909.1| PREDICTED: iron sulfur cluster assembly prot...   258   5e-67
gb|ACI47519.1| iron-sulfer cluster scaffold protein ISU1 [Eucaly...   258   8e-67
gb|ADM67612.1| iron-sulfur cluster scaffold protein [Hevea brasi...   257   1e-66
ref|XP_003569498.1| PREDICTED: iron-sulfur cluster assembly enzy...   253   2e-65
ref|XP_004152478.1| PREDICTED: iron-sulfur cluster assembly prot...   251   6e-65

>ref|XP_002265909.1| PREDICTED: iron sulfur cluster assembly protein 1, mitochondrial
           [Vitis vinifera]
          Length = 155

 Score =  258 bits (660), Expect = 5e-67
 Identities = 129/147 (87%), Positives = 139/147 (94%), Gaps = 1/147 (0%)
 Frame = -3

Query: 625 RILGLGFR-QEAPAINQLRFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACGDVMK 449
           RILGLG + ++A +   LRFYHERVVDHYNNPRNVGSFDK+DP VGTGLVGAPACGDVMK
Sbjct: 8   RILGLGQQGKQAQSQALLRFYHERVVDHYNNPRNVGSFDKNDPDVGTGLVGAPACGDVMK 67

Query: 448 LQIKVDDKTGKIVDACFKTFGCGSAIASSSVATEWVKGRQMEDVVSIKNTEIAKHLSLPP 269
           LQIKVDD+TGKIVDACFKTFGCGSAIASSSVATEWVKG+Q E+V+SIKNTEIAKHLSLPP
Sbjct: 68  LQIKVDDQTGKIVDACFKTFGCGSAIASSSVATEWVKGKQTEEVLSIKNTEIAKHLSLPP 127

Query: 268 VKLHCSMLAEDAIKAAVKDYEAKRAKS 188
           VKLHCSMLAEDAIKAAVKDYEAKRAK+
Sbjct: 128 VKLHCSMLAEDAIKAAVKDYEAKRAKT 154


>gb|ACI47519.1| iron-sulfer cluster scaffold protein ISU1 [Eucalyptus grandis]
          Length = 173

 Score =  258 bits (658), Expect = 8e-67
 Identities = 132/166 (79%), Positives = 144/166 (86%), Gaps = 6/166 (3%)
 Frame = -3

Query: 628 KRILGLGFRQEAPA--INQLRFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACGDV 455
           K++ GL      PA  +  LR YHERVVDHYNNPRNVGSFDK+DP VGTGLVGAPACGDV
Sbjct: 7   KKLAGLAGAAAGPARVVPPLRLYHERVVDHYNNPRNVGSFDKNDPAVGTGLVGAPACGDV 66

Query: 454 MKLQIKVDDKTGKIVDACFKTFGCGSAIASSSVATEWVKGRQMEDVVSIKNTEIAKHLSL 275
           MKLQIKVD++TGKIVDA FKTFGCGSAIASSSVATEWVKG+QME+V+SIKNTEIAKHLSL
Sbjct: 67  MKLQIKVDEETGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSL 126

Query: 274 PPVKLHCSMLAEDAIKAAVKDYEAKRAK----SSTPEASPAEKAAD 149
           PPVKLHCSMLAEDAIKAAVKDYEAKRAK    S + + +P EKAAD
Sbjct: 127 PPVKLHCSMLAEDAIKAAVKDYEAKRAKLDGSSDSAKDAPLEKAAD 172


>gb|ADM67612.1| iron-sulfur cluster scaffold protein [Hevea brasiliensis]
          Length = 166

 Score =  257 bits (656), Expect = 1e-66
 Identities = 128/162 (79%), Positives = 147/162 (90%), Gaps = 1/162 (0%)
 Frame = -3

Query: 634 ATKRILGLGFRQEAPAINQLRFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACGDV 455
           A+KR+LG    + A  ++  RFYHE V+DH+NNPRNVGSFDK+DPTVGTGLVGAPACGDV
Sbjct: 5   ASKRLLGQAPPRPAQILS--RFYHENVIDHFNNPRNVGSFDKNDPTVGTGLVGAPACGDV 62

Query: 454 MKLQIKVDDKTGKIVDACFKTFGCGSAIASSSVATEWVKGRQMEDVVSIKNTEIAKHLSL 275
           MKLQIKVD+KTG+IVDA FKTFGCGSAIASSSVATEWVKG+QME+V++IKNTEIAKHLSL
Sbjct: 63  MKLQIKVDEKTGEIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHLSL 122

Query: 274 PPVKLHCSMLAEDAIKAAVKDYEAKRAK-SSTPEASPAEKAA 152
           PPVKLHCSMLAEDAIKAAVKDY+ KRAK + TP+A+P E+AA
Sbjct: 123 PPVKLHCSMLAEDAIKAAVKDYQTKRAKVNGTPDAAPVEQAA 164


>ref|XP_003569498.1| PREDICTED: iron-sulfur cluster assembly enzyme ISCU,
           mitochondrial-like [Brachypodium distachyon]
          Length = 175

 Score =  253 bits (647), Expect = 2e-65
 Identities = 130/163 (79%), Positives = 143/163 (87%), Gaps = 3/163 (1%)
 Frame = -3

Query: 628 KRILGLGFRQ-EAPAINQ--LRFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACGD 458
           +R+LG   R+  AP ++   +R YHERVVDHYNNPRNVGSFDK DP VGTGLVGAPACGD
Sbjct: 15  RRLLGPSGREGAAPGLSAAGVRAYHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGD 74

Query: 457 VMKLQIKVDDKTGKIVDACFKTFGCGSAIASSSVATEWVKGRQMEDVVSIKNTEIAKHLS 278
           VMKLQI+VD+ TGKIVDACFKTFGCGSAIASSSVATEWVKG+QME+VV+IKNTEIAKHLS
Sbjct: 75  VMKLQIRVDEGTGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVVTIKNTEIAKHLS 134

Query: 277 LPPVKLHCSMLAEDAIKAAVKDYEAKRAKSSTPEASPAEKAAD 149
           LPPVKLHCSMLAEDAIKAAVKDYEAK+AK      SPAEK A+
Sbjct: 135 LPPVKLHCSMLAEDAIKAAVKDYEAKKAKVGD---SPAEKVAE 174


>ref|XP_004152478.1| PREDICTED: iron-sulfur cluster assembly protein 1-like [Cucumis
           sativus] gi|449520487|ref|XP_004167265.1| PREDICTED:
           iron-sulfur cluster assembly protein 1-like [Cucumis
           sativus]
          Length = 170

 Score =  251 bits (642), Expect = 6e-65
 Identities = 124/165 (75%), Positives = 149/165 (90%), Gaps = 3/165 (1%)
 Frame = -3

Query: 634 ATKRILGLGFRQ-EAPAINQL-RFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACG 461
           ++KR+LG+  +   +PA+  + RFYHERV+DHYNNPRNVGSFDK+DPTVGTGLVGAPACG
Sbjct: 5   SSKRLLGIASKDLPSPAVQIVPRFYHERVIDHYNNPRNVGSFDKNDPTVGTGLVGAPACG 64

Query: 460 DVMKLQIKVDDKTGKIVDACFKTFGCGSAIASSSVATEWVKGRQMEDVVSIKNTEIAKHL 281
           DVMKLQIK+D+KTGK+VDACFKTFGCGSAIASSS+ATE VKG+QM++ ++IKN+EIAKHL
Sbjct: 65  DVMKLQIKIDEKTGKVVDACFKTFGCGSAIASSSLATEMVKGKQMDEALTIKNSEIAKHL 124

Query: 280 SLPPVKLHCSMLAEDAIKAAVKDYEAKRAK-SSTPEASPAEKAAD 149
           SLPPVKLHCSMLAEDAIKAAVKDYEAKRAK ++  E+S  EK ++
Sbjct: 125 SLPPVKLHCSMLAEDAIKAAVKDYEAKRAKLANGAESSSVEKVSN 169


Top