BLASTX nr result

ID: Cnidium21_contig00003390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003390
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46751.1| eukaryotic initiation factor 5A4-like protein [So...   152   8e-35
sp|P56336.1|IF5A4_SOLTU RecName: Full=Eukaryotic translation ini...   152   8e-35
sp|Q945F4.1|IF5A2_MEDSA RecName: Full=Eukaryotic translation ini...   151   2e-34
ref|XP_003610324.1| Eukaryotic translation initiation factor 5A-...   151   2e-34
ref|NP_001235981.1| uncharacterized protein LOC100305991 [Glycin...   151   2e-34

>gb|ABA46751.1| eukaryotic initiation factor 5A4-like protein [Solanum tuberosum]
          Length = 159

 Score =  152 bits (384), Expect = 8e-35
 Identities = 73/80 (91%), Positives = 79/80 (98%)
 Frame = +3

Query: 3   SSHNCDVPHVTRTDYQLIDIAEDGFVSLLTDNGNTKDDLKLPTDETLLTQIKDGFADGKD 182
           SSHNCDVPHV RTDYQLIDI+EDGFVSLLTDNGNTKDDL+LPTD++LL+QIKDGFA+GKD
Sbjct: 77  SSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKDGFAEGKD 136

Query: 183 LVVSVMSAMGEEQINALKDI 242
           LVVSVMSAMGEEQINALKDI
Sbjct: 137 LVVSVMSAMGEEQINALKDI 156


>sp|P56336.1|IF5A4_SOLTU RecName: Full=Eukaryotic translation initiation factor 5A-4;
           Short=eIF-5A-4; AltName: Full=eIF-4D
           gi|2225883|dbj|BAA20878.1| eukaryotic initiation factor
           5A4 [Solanum tuberosum]
          Length = 159

 Score =  152 bits (384), Expect = 8e-35
 Identities = 73/80 (91%), Positives = 79/80 (98%)
 Frame = +3

Query: 3   SSHNCDVPHVTRTDYQLIDIAEDGFVSLLTDNGNTKDDLKLPTDETLLTQIKDGFADGKD 182
           SSHNCDVPHV RTDYQLIDI+EDGFVSLLTDNGNTKDDL+LPTD++LL+QIKDGFA+GKD
Sbjct: 77  SSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKDGFAEGKD 136

Query: 183 LVVSVMSAMGEEQINALKDI 242
           LVVSVMSAMGEEQINALKDI
Sbjct: 137 LVVSVMSAMGEEQINALKDI 156


>sp|Q945F4.1|IF5A2_MEDSA RecName: Full=Eukaryotic translation initiation factor 5A-2;
           Short=eIF-5A-2 gi|15866587|gb|AAL10404.1|AF416338_1
           eukaryotic translation initiation factor 5A-2 [Medicago
           sativa] gi|217071176|gb|ACJ83948.1| unknown [Medicago
           truncatula] gi|217075664|gb|ACJ86192.1| unknown
           [Medicago truncatula] gi|388494366|gb|AFK35249.1|
           unknown [Medicago truncatula]
          Length = 159

 Score =  151 bits (381), Expect = 2e-34
 Identities = 74/80 (92%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   SSHNCDVPHVTRTDYQLIDIAEDGFVSLLTDNGNTKDDLKLPTDETLLTQIKDGFADGKD 182
           SSHNCDVPHV RTDYQLIDI+EDGFVSLLTDNG+TKDDLKLPTD++LLTQIKDGFADGKD
Sbjct: 77  SSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGKD 136

Query: 183 LVVSVMSAMGEEQINALKDI 242
           LVVSVMSAMGEEQI ALKDI
Sbjct: 137 LVVSVMSAMGEEQICALKDI 156


>ref|XP_003610324.1| Eukaryotic translation initiation factor 5A-1 [Medicago truncatula]
           gi|355511379|gb|AES92521.1| Eukaryotic translation
           initiation factor 5A-1 [Medicago truncatula]
          Length = 676

 Score =  151 bits (381), Expect = 2e-34
 Identities = 74/80 (92%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   SSHNCDVPHVTRTDYQLIDIAEDGFVSLLTDNGNTKDDLKLPTDETLLTQIKDGFADGKD 182
           SSHNCDVPHV RTDYQLIDI+EDGFVSLLTDNG+TKDDLKLPTD++LLTQIKDGFADGKD
Sbjct: 77  SSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGKD 136

Query: 183 LVVSVMSAMGEEQINALKDI 242
           LVVSVMSAMGEEQI ALKDI
Sbjct: 137 LVVSVMSAMGEEQICALKDI 156



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 41/68 (60%), Positives = 49/68 (72%)
 Frame = +3

Query: 6   SHNCDVPHVTRTDYQLIDIAEDGFVSLLTDNGNTKDDLKLPTDETLLTQIKDGFADGKDL 185
           S  C VPHV R D +LIDI+EDG VSLLTDNG+TKD L       +L  IK+ FA+GKDL
Sbjct: 353 SRPCKVPHVNRADDRLIDISEDGSVSLLTDNGSTKDTL-------VLGFIKEEFAEGKDL 405

Query: 186 VVSVMSAM 209
           +V V+SAM
Sbjct: 406 MVGVVSAM 413


>ref|NP_001235981.1| uncharacterized protein LOC100305991 [Glycine max]
           gi|255627209|gb|ACU13949.1| unknown [Glycine max]
          Length = 160

 Score =  151 bits (381), Expect = 2e-34
 Identities = 74/80 (92%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   SSHNCDVPHVTRTDYQLIDIAEDGFVSLLTDNGNTKDDLKLPTDETLLTQIKDGFADGKD 182
           SSHNCDVPHV RTDYQLIDIAEDGF+SLLT+NGNTKDDLKLPTDE+LLTQIKDGFA+GKD
Sbjct: 77  SSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTDESLLTQIKDGFAEGKD 136

Query: 183 LVVSVMSAMGEEQINALKDI 242
           LVVSVMSAMGEEQI ALKDI
Sbjct: 137 LVVSVMSAMGEEQICALKDI 156


Top