BLASTX nr result

ID: Cnidium21_contig00003382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003382
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26916.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_002280520.1| PREDICTED: U-box domain-containing protein 1...   125   5e-27
ref|XP_004161193.1| PREDICTED: U-box domain-containing protein 1...   103   1e-20
ref|XP_002888814.1| armadillo/beta-catenin repeat family protein...   102   3e-20
ref|NP_177258.3| U-box domain-containing protein 10 [Arabidopsis...   100   9e-20

>emb|CBI26916.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/118 (57%), Positives = 82/118 (69%), Gaps = 3/118 (2%)
 Frame = +3

Query: 120 LLGLVQDVGKASGGGFKGPFKKDCTDLARRIAFLSHLFEEVRDFKGDLRALDEFSSTCS- 296
           LL LV DV   S G F G FK+DCTDL RRIA L+HLFEE+RDF   LR LD  +S+ S 
Sbjct: 7   LLALVNDVVGVSVG-FGGVFKRDCTDLVRRIALLTHLFEEIRDFGAGLRPLDVSTSSASP 65

Query: 297 --CLVDLKVVVQATKGLLVAADSFDANISPEGAAKKIAFQFQCLTWKLERTLKNFPYD 464
             CL ++   +QA K LL AA +F ++   +GAAKKI FQFQC+TWKLE+TL N PYD
Sbjct: 66  LTCLSEVANALQAAKRLLSAAGNFSSDAFSDGAAKKITFQFQCVTWKLEKTLGNLPYD 123


>ref|XP_002280520.1| PREDICTED: U-box domain-containing protein 10-like [Vitis vinifera]
          Length = 639

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/118 (57%), Positives = 82/118 (69%), Gaps = 3/118 (2%)
 Frame = +3

Query: 120 LLGLVQDVGKASGGGFKGPFKKDCTDLARRIAFLSHLFEEVRDFKGDLRALDEFSSTCS- 296
           LL LV DV   S G F G FK+DCTDL RRIA L+HLFEE+RDF   LR LD  +S+ S 
Sbjct: 7   LLALVNDVVGVSVG-FGGVFKRDCTDLVRRIALLTHLFEEIRDFGAGLRPLDVSTSSASP 65

Query: 297 --CLVDLKVVVQATKGLLVAADSFDANISPEGAAKKIAFQFQCLTWKLERTLKNFPYD 464
             CL ++   +QA K LL AA +F ++   +GAAKKI FQFQC+TWKLE+TL N PYD
Sbjct: 66  LTCLSEVANALQAAKRLLSAAGNFSSDAFSDGAAKKITFQFQCVTWKLEKTLGNLPYD 123


>ref|XP_004161193.1| PREDICTED: U-box domain-containing protein 10-like [Cucumis
           sativus]
          Length = 661

 Score =  103 bits (258), Expect = 1e-20
 Identities = 67/151 (44%), Positives = 82/151 (54%), Gaps = 22/151 (14%)
 Frame = +3

Query: 84  ISGDSTAASIHALLGLVQDVGKASGGGFKGP-FKKDCTDLARRIAFLSHLFEEVRDFKG- 257
           ++GDS  A   ALL  V+DV + S G   G  FKKDCTDL RRI  L+H FEE+RD    
Sbjct: 5   VAGDSDTAPALALLDFVRDVVRMSAGTNSGQLFKKDCTDLVRRIVLLTHFFEEIRDSNAL 64

Query: 258 DLRALDEFSSTCSC-------------------LVDLKVVVQATKGLLVAADSFDA-NIS 377
             R LD  SS+ S                    L DL   ++ TK L+  A +F +   S
Sbjct: 65  QFRFLDASSSSSSSSSSSSCGAVTGRDSSHFPWLSDLVAALKDTKRLIFIASTFRSYGSS 124

Query: 378 PEGAAKKIAFQFQCLTWKLERTLKNFPYDQL 470
            E  AKKI FQFQC+TWKLE+ L N PYD+L
Sbjct: 125 SEEVAKKILFQFQCVTWKLEKALGNLPYDRL 155


>ref|XP_002888814.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334655|gb|EFH65073.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 633

 Score =  102 bits (254), Expect = 3e-20
 Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
 Frame = +3

Query: 117 ALLGLVQDVGKASGGGFKGPFKKDCTDLARRIAFLSHLFEEVRDFKGDLRALDEFSST-- 290
           +L+GL+ ++ +       G FKKDC DLARR+  L+HL EE+RD        D  SS   
Sbjct: 10  SLIGLISEINEVPVNF--GVFKKDCADLARRVGLLTHLIEEIRDSSPPPPESDASSSLIS 67

Query: 291 --CSCLVDLKVVVQATKGLLVAADSFDANISPEGAAKKIAFQFQCLTWKLERTLKNFPYD 464
             C    DL V +QA K LL +A SF A  S +GAAK+I FQFQC+TWKLE+ L + PYD
Sbjct: 68  YECDWWSDLVVGLQAAKRLLSSATSFQARESSDGAAKRILFQFQCVTWKLEKALGDLPYD 127

Query: 465 Q 467
           +
Sbjct: 128 R 128


>ref|NP_177258.3| U-box domain-containing protein 10 [Arabidopsis thaliana]
           gi|75262229|sp|Q9C9A6.1|PUB10_ARATH RecName: Full=U-box
           domain-containing protein 10; AltName: Full=Plant U-box
           protein 10 gi|12323419|gb|AAG51682.1|AC016972_1 unknown
           protein; 17861-15581 [Arabidopsis thaliana]
           gi|19715632|gb|AAL91637.1| At1g71020/F23N20_1
           [Arabidopsis thaliana] gi|22655468|gb|AAM98326.1|
           At1g71020/F23N20_1 [Arabidopsis thaliana]
           gi|332197031|gb|AEE35152.1| U-box domain-containing
           protein 10 [Arabidopsis thaliana]
          Length = 628

 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
 Frame = +3

Query: 117 ALLGLVQDVGKASGGGFKGPFKKDCTDLARRIAFLSHLFEEVRDFKGDLRALDEFSST-- 290
           +L+GL+ ++ +  G    G FKKDC+DLARR+  L+HL EE+RD      + D  SS   
Sbjct: 10  SLIGLIAEINEIPGNF--GLFKKDCSDLARRVGLLTHLIEEIRDSSPPSES-DASSSLNS 66

Query: 291 --CSCLVDLKVVVQATKGLLVAADSFDANISPEGAAKKIAFQFQCLTWKLERTLKNFPYD 464
             C    DL V +QA K LL +A SF A  S +GAAK+I+FQFQC+TWKLE+ L +  YD
Sbjct: 67  HECDWWSDLVVGLQAAKRLLSSATSFQARESSDGAAKRISFQFQCVTWKLEKALGDLTYD 126

Query: 465 Q 467
           +
Sbjct: 127 R 127


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