BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003377
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90599.1| photosystem I subunit III precursor (chloroplast)...   134   2e-29
ref|XP_002516419.1| Photosystem I reaction center subunit III, c...   125   5e-27
sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction cent...   122   7e-26
gb|AAD27880.2|AF139468_1 photosystem I reaction center subunit I...   120   2e-25
gb|AFK41712.1| unknown [Medicago truncatula]                          120   2e-25

>gb|AFW90599.1| photosystem I subunit III precursor (chloroplast) [Solanum
           tuberosum]
          Length = 228

 Score =  134 bits (336), Expect = 2e-29
 Identities = 76/152 (50%), Positives = 89/152 (58%)
 Frame = -2

Query: 458 MAFSISTNLYKPVSTPKLNSQFISKPKLATTISCSASSQNNNISTATEQEXXXXXXXXXX 279
           M+ +I TNL KP+ST K  SQF +KP+ +  +    SS    +S +TE+           
Sbjct: 1   MSLTIPTNLSKPISTSKFGSQFTTKPRTSAIV---CSSNQTPVSNSTEESSSSLKAFSAA 57

Query: 278 XXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPALA 99
                              DI+GLTPCKDSKQFAKR             LY+PDSAPALA
Sbjct: 58  LALSSILLSAPVLPASA--DISGLTPCKDSKQFAKREKQQIKKLESSLKLYSPDSAPALA 115

Query: 98  IKATMEKTKRRFDNYGKQGLLCGSDGLPHLIV 3
           I AT+EKTKRRFDNYGKQGLLCGSDGLPHLIV
Sbjct: 116 INATIEKTKRRFDNYGKQGLLCGSDGLPHLIV 147


>ref|XP_002516419.1| Photosystem I reaction center subunit III, chloroplast precursor,
           putative [Ricinus communis] gi|223544454|gb|EEF45974.1|
           Photosystem I reaction center subunit III, chloroplast
           precursor, putative [Ricinus communis]
          Length = 225

 Score =  125 bits (315), Expect = 5e-27
 Identities = 75/152 (49%), Positives = 88/152 (57%)
 Frame = -2

Query: 458 MAFSISTNLYKPVSTPKLNSQFISKPKLATTISCSASSQNNNISTATEQEXXXXXXXXXX 279
           M+ +I +NL KP+  PKL S    +  +   I CSAS      + +T+++          
Sbjct: 1   MSLTIPSNLSKPMLKPKLGSSLTPRSSM---IVCSASQ-----TPSTQEKDSSKSPLQAF 52

Query: 278 XXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPALA 99
                             ADI+GLTPCKDSKQFAKR             LYAPDSAPALA
Sbjct: 53  SAALALSSILLSAPLPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALA 112

Query: 98  IKATMEKTKRRFDNYGKQGLLCGSDGLPHLIV 3
           IKAT+EKTKRRFDNYGKQGLLCGSDGLPHLIV
Sbjct: 113 IKATVEKTKRRFDNYGKQGLLCGSDGLPHLIV 144


>sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction center subunit III,
           chloroplastic; AltName: Full=Light-harvesting complex I
           17 kDa protein; AltName: Full=PSI-F; Flags: Precursor
           gi|168173|gb|AAA33344.1| photosystem I subunit III
           [Flaveria trinervia] gi|298482|gb|AAB25669.1|
           photosystem I reaction center subunit III, PSI-RC PsaF
           [Flaveria trinervia, Peptide, 232 aa]
          Length = 232

 Score =  122 bits (305), Expect = 7e-26
 Identities = 74/153 (48%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
 Frame = -2

Query: 458 MAFSISTNLYKPVSTPKLNSQFI-SKPKLATTISCSASSQNNNISTATEQEXXXXXXXXX 282
           M+F+IST+  +P+    L S  I SK K+ +T    + S +  I+ A  +          
Sbjct: 1   MSFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAAL 60

Query: 281 XXXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPAL 102
                               DI+GLTPCK+SKQFAKR             LYAPDSAPAL
Sbjct: 61  ALSSILVSSTVPALPASA--DISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPAL 118

Query: 101 AIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIV 3
           AIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIV
Sbjct: 119 AIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIV 151


>gb|AAD27880.2|AF139468_1 photosystem I reaction center subunit III [Vigna radiata]
          Length = 223

 Score =  120 bits (301), Expect = 2e-25
 Identities = 79/158 (50%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
 Frame = -2

Query: 458 MAFSISTNLYKPVST-PKLNSQFISKPKLATTISCSA-----SSQNNNISTATEQEXXXX 297
           M+ +I TNL KP +  PKL S      KL  TI CSA     S  NNNIS+  +      
Sbjct: 1   MSLTIPTNLSKPAALRPKLGS------KLRPTIVCSATPNNNSDNNNNISSDLKA----- 49

Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPD 117
                                   ADI+GLTPCK+SKQFAKR             LYAPD
Sbjct: 50  -----FSAALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQSIKKLESSLKLYAPD 104

Query: 116 SAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIV 3
           SAPALAIKA++EKTKRRFDNY KQGLLCG+DGLPHLIV
Sbjct: 105 SAPALAIKASVEKTKRRFDNYAKQGLLCGADGLPHLIV 142


>gb|AFK41712.1| unknown [Medicago truncatula]
          Length = 224

 Score =  120 bits (301), Expect = 2e-25
 Identities = 73/152 (48%), Positives = 86/152 (56%)
 Frame = -2

Query: 458 MAFSISTNLYKPVSTPKLNSQFISKPKLATTISCSASSQNNNISTATEQEXXXXXXXXXX 279
           M+ +I TNL KP ST  L  +   KPKL+T I   +++Q    +                
Sbjct: 1   MSLTIPTNLSKPTST--LRPKLPQKPKLSTNIIHCSTNQEKPTNDVNSN-------LKAF 51

Query: 278 XXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPALA 99
                             ADI+GLTPC++SKQFAKR             LYAPDSAPALA
Sbjct: 52  SAALALSSILISSPLPAVADISGLTPCRESKQFAKREKQSIKKLESSLKLYAPDSAPALA 111

Query: 98  IKATMEKTKRRFDNYGKQGLLCGSDGLPHLIV 3
           IKAT+EKTKRRFDNYGKQGLLCG+DGLPHLIV
Sbjct: 112 IKATVEKTKRRFDNYGKQGLLCGADGLPHLIV 143