BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003376
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP03872.1| putative photosystem I subunit III precursor [Nic...   187   1e-57
gb|AFW90599.1| photosystem I subunit III precursor (chloroplast)...   187   3e-57
sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction cent...   165   4e-52
ref|XP_002516419.1| Photosystem I reaction center subunit III, c...   176   1e-51
gb|AAD27880.2|AF139468_1 photosystem I reaction center subunit I...   166   1e-49

>gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
          Length = 222

 Score =  187 bits (476), Expect(2) = 1e-57
 Identities = 106/176 (60%), Positives = 116/176 (65%)
 Frame = -2

Query: 834 MALSISTNLYKPISNPKLNSQFTAKPKLASIVCSASPQNNNISTCTEQEXXXXXXXXXXX 655
           M+L+I TNL KPIS   LNSQFT KP+ A+IVCS+S      S+C EQ            
Sbjct: 1   MSLTIPTNLSKPIST--LNSQFTKKPRFATIVCSSS------SSCDEQSSCNLKAFSAAL 52

Query: 654 XXXXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPA 475
                                DI+GLTPCK+SKQFAKR             LYAPDSAPA
Sbjct: 53  ALSSVLLSVPVLPASA-----DISGLTPCKESKQFAKREKQQIKKLESSLKLYAPDSAPA 107

Query: 474 LAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG 307
           LAI+AT+EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG
Sbjct: 108 LAIQATVEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG 163



 Score = 62.8 bits (151), Expect(2) = 1e-57
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -1

Query: 190 IDVPLASKLLFRGFSWPVAAYRAYLNGDLIDPS 92
           IDVPLA+KL++RGFSWPVAAYR YLNG+LIDP+
Sbjct: 189 IDVPLANKLIWRGFSWPVAAYREYLNGELIDPN 221


>gb|AFW90599.1| photosystem I subunit III precursor (chloroplast) [Solanum
           tuberosum]
          Length = 228

 Score =  187 bits (474), Expect(2) = 3e-57
 Identities = 102/176 (57%), Positives = 114/176 (64%)
 Frame = -2

Query: 834 MALSISTNLYKPISNPKLNSQFTAKPKLASIVCSASPQNNNISTCTEQEXXXXXXXXXXX 655
           M+L+I TNL KPIS  K  SQFT KP+ ++IVCS++     +S  TE+            
Sbjct: 1   MSLTIPTNLSKPISTSKFGSQFTTKPRTSAIVCSSN--QTPVSNSTEESSSSLKAFSAAL 58

Query: 654 XXXXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPA 475
                                DI+GLTPCKDSKQFAKR             LY+PDSAPA
Sbjct: 59  ALSSILLSAPVLPASA-----DISGLTPCKDSKQFAKREKQQIKKLESSLKLYSPDSAPA 113

Query: 474 LAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG 307
           LAI AT+EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG
Sbjct: 114 LAINATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG 169



 Score = 62.0 bits (149), Expect(2) = 3e-57
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -1

Query: 190 IDVPLASKLLFRGFSWPVAAYRAYLNGDLIDPSV 89
           IDVPLA++L++RGF WPVAAYR YLNGDLIDP+V
Sbjct: 195 IDVPLANRLVWRGFIWPVAAYREYLNGDLIDPNV 228


>sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction center subunit III,
           chloroplastic; AltName: Full=Light-harvesting complex I
           17 kDa protein; AltName: Full=PSI-F; Flags: Precursor
           gi|168173|gb|AAA33344.1| photosystem I subunit III
           [Flaveria trinervia] gi|298482|gb|AAB25669.1|
           photosystem I reaction center subunit III, PSI-RC PsaF
           [Flaveria trinervia, Peptide, 232 aa]
          Length = 232

 Score =  165 bits (417), Expect(2) = 4e-52
 Identities = 101/182 (55%), Positives = 112/182 (61%), Gaps = 6/182 (3%)
 Frame = -2

Query: 834 MALSISTNLYKP--ISNPKLNSQFTAKPKLAS--IVCSASPQN--NNISTCTEQEXXXXX 673
           M+ +IST+  +P  ISN K +S  T+K K+ S  IVCS S     NN    +  +     
Sbjct: 1   MSFTISTSFLQPLEISNLK-SSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAA 59

Query: 672 XXXXXXXXXXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYA 493
                                      DI+GLTPCK+SKQFAKR             LYA
Sbjct: 60  LALSSILVSSTVPALPASA--------DISGLTPCKESKQFAKREKQSLKKLESSLKLYA 111

Query: 492 PDSAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYI 313
           PDSAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYI
Sbjct: 112 PDSAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYI 171

Query: 312 AG 307
           AG
Sbjct: 172 AG 173



 Score = 67.0 bits (162), Expect(2) = 4e-52
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -1

Query: 190 IDVPLASKLLFRGFSWPVAAYRAYLNGDLIDPSV 89
           IDVPLA+KLLFRGFSWPVAAYR YLNG+LIDP+V
Sbjct: 199 IDVPLATKLLFRGFSWPVAAYREYLNGELIDPTV 232


>ref|XP_002516419.1| Photosystem I reaction center subunit III, chloroplast precursor,
           putative [Ricinus communis] gi|223544454|gb|EEF45974.1|
           Photosystem I reaction center subunit III, chloroplast
           precursor, putative [Ricinus communis]
          Length = 225

 Score =  176 bits (447), Expect(2) = 1e-51
 Identities = 102/176 (57%), Positives = 111/176 (63%)
 Frame = -2

Query: 834 MALSISTNLYKPISNPKLNSQFTAKPKLASIVCSASPQNNNISTCTEQEXXXXXXXXXXX 655
           M+L+I +NL KP+  PKL S  T  P+ + IVCSAS       T + QE           
Sbjct: 1   MSLTIPSNLSKPMLKPKLGSSLT--PRSSMIVCSAS------QTPSTQEKDSSKSPLQAF 52

Query: 654 XXXXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPA 475
                                DI+GLTPCKDSKQFAKR             LYAPDSAPA
Sbjct: 53  SAALALSSILLSAPLPAVA--DISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPA 110

Query: 474 LAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG 307
           LAIKAT+EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG
Sbjct: 111 LAIKATVEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG 166



 Score = 53.5 bits (127), Expect(2) = 1e-51
 Identities = 22/30 (73%), Positives = 28/30 (93%)
 Frame = -1

Query: 190 IDVPLASKLLFRGFSWPVAAYRAYLNGDLI 101
           IDVPLA+ L+FRGFSWPVAAYR ++NG+L+
Sbjct: 192 IDVPLATGLIFRGFSWPVAAYREFVNGELV 221


>gb|AAD27880.2|AF139468_1 photosystem I reaction center subunit III [Vigna radiata]
          Length = 223

 Score =  166 bits (419), Expect(2) = 1e-49
 Identities = 96/177 (54%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
 Frame = -2

Query: 834 MALSISTNLYKPIS-NPKLNSQFTAKPKLASIVCSASPQNNNISTCTEQEXXXXXXXXXX 658
           M+L+I TNL KP +  PKL S+        +IVCSA+P NN+ +                
Sbjct: 1   MSLTIPTNLSKPAALRPKLGSKLRP-----TIVCSATPNNNSDNN--------NNISSDL 47

Query: 657 XXXXXXXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAP 478
                                ADI+GLTPCK+SKQFAKR             LYAPDSAP
Sbjct: 48  KAFSAALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQSIKKLESSLKLYAPDSAP 107

Query: 477 ALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAG 307
           ALAIKA++EKTKRRFDNY KQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAG
Sbjct: 108 ALAIKASVEKTKRRFDNYAKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAG 164



 Score = 58.2 bits (139), Expect(2) = 1e-49
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 190 IDVPLASKLLFRGFSWPVAAYRAYLNGDLIDPSV 89
           IDVPLAS+LLFRGFSWPVAAYR  +NGDLI   V
Sbjct: 190 IDVPLASRLLFRGFSWPVAAYRELINGDLIAKDV 223