BLASTX nr result

ID: Cnidium21_contig00003344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003344
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283405.1| PREDICTED: uncharacterized protein LOC100250...    94   9e-18
ref|XP_002526287.1| ATP binding protein, putative [Ricinus commu...    94   9e-18
emb|CAN82042.1| hypothetical protein VITISV_033523 [Vitis vinifera]    94   1e-17
ref|XP_002314835.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002312416.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>ref|XP_002283405.1| PREDICTED: uncharacterized protein LOC100250808 [Vitis vinifera]
          Length = 697

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/68 (64%), Positives = 53/68 (77%)
 Frame = +2

Query: 278 YNATRNAPVPQSEMAAGVYRTETTSTPSFVQVPANQHQPQYAGFQQLHHPSQSNAPALAT 457
           YN TRNAP+ + EMAAG+YRT T + P  VQVP++QHQ QY G+ Q+HHPSQS AP  A 
Sbjct: 577 YNPTRNAPLQKPEMAAGMYRTGTAAAP-LVQVPSSQHQQQYVGYSQIHHPSQSIAPPSAA 635

Query: 458 TANYAYQF 481
           TANYAY+F
Sbjct: 636 TANYAYEF 643


>ref|XP_002526287.1| ATP binding protein, putative [Ricinus communis]
           gi|223534368|gb|EEF36076.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 717

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/69 (65%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
 Frame = +2

Query: 278 YNATRNAPVPQSEMA-AGVYRTETTSTPSFVQVPANQHQPQYAGFQQLHHPSQSNAPALA 454
           YN  RNAP+ + EMA AG+YRT TT TP  VQVP+NQHQ QY G+ Q+HHPSQS AP  A
Sbjct: 601 YNQMRNAPMAKPEMAPAGMYRTTTTGTPQLVQVPSNQHQQQYLGYSQVHHPSQSVAPTSA 660

Query: 455 TTANYAYQF 481
             ANYAY+F
Sbjct: 661 GPANYAYEF 669



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 5/48 (10%)
 Frame = +1

Query: 10  SYYHMYPSQQSH-----HPAMDHQYPVYYVPAGQPQAYNMPVQQQGYS 138
           +YY +YP QQ H     H  ++ QYPVYY+PA QPQAYNMPVQQ   S
Sbjct: 529 AYYPVYPPQQQHLHQQHHHQLEQQYPVYYMPARQPQAYNMPVQQSSIS 576


>emb|CAN82042.1| hypothetical protein VITISV_033523 [Vitis vinifera]
          Length = 549

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/68 (64%), Positives = 53/68 (77%)
 Frame = +2

Query: 278 YNATRNAPVPQSEMAAGVYRTETTSTPSFVQVPANQHQPQYAGFQQLHHPSQSNAPALAT 457
           YN TRNAP+ + EMAAG+YRT T + P  VQVP++QHQ QY G+ Q+HHPSQS AP  A 
Sbjct: 429 YNPTRNAPLQKPEMAAGMYRTGTAAAP-LVQVPSSQHQQQYVGYSQIHHPSQSIAPPSAG 487

Query: 458 TANYAYQF 481
           TANYAY+F
Sbjct: 488 TANYAYEF 495


>ref|XP_002314835.1| predicted protein [Populus trichocarpa] gi|222863875|gb|EEF01006.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/68 (58%), Positives = 49/68 (72%)
 Frame = +2

Query: 278 YNATRNAPVPQSEMAAGVYRTETTSTPSFVQVPANQHQPQYAGFQQLHHPSQSNAPALAT 457
           +N  RNA + ++E+AA  YRT T  TP  VQVP+NQHQ QY G+ Q+HHPSQS AP  A 
Sbjct: 606 FNPMRNAHIAKTELAA--YRTATPGTPQLVQVPSNQHQQQYVGYSQVHHPSQSVAPTSAG 663

Query: 458 TANYAYQF 481
           TANY Y+F
Sbjct: 664 TANYGYEF 671



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/48 (66%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
 Frame = +1

Query: 1   PMGSYYHMYPSQQSHH--PAMDHQYPVYYVPAGQPQAYNMPVQQQGYS 138
           PM +YY +YP QQ HH  P +D QYPVYYV A QPQAYN+PVQQ G S
Sbjct: 533 PMSAYYPVYPPQQQHHHHPQIDQQYPVYYVQARQPQAYNLPVQQPGIS 580


>ref|XP_002312416.1| predicted protein [Populus trichocarpa] gi|222852236|gb|EEE89783.1|
           predicted protein [Populus trichocarpa]
          Length = 702

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/68 (57%), Positives = 48/68 (70%)
 Frame = +2

Query: 278 YNATRNAPVPQSEMAAGVYRTETTSTPSFVQVPANQHQPQYAGFQQLHHPSQSNAPALAT 457
           +N  RNAP+ + E+AA  YRT T   P  VQVP++QHQ QY G+ Q+HHPSQS APA   
Sbjct: 590 FNPMRNAPIVKPELAA--YRTATPGAPQLVQVPSSQHQQQYIGYSQVHHPSQSVAPASTG 647

Query: 458 TANYAYQF 481
           TANY Y+F
Sbjct: 648 TANYGYEF 655



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/48 (60%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
 Frame = +1

Query: 1   PMGSYYHMY-PSQQSHH-----PAMDHQYPVYYVPAGQPQAYNMPVQQ 126
           PM +YY +Y P QQ  H     P MD QYPVYYV   QPQAYN+PVQQ
Sbjct: 517 PMSAYYPVYSPQQQQQHNHQLQPHMDSQYPVYYVQTRQPQAYNLPVQQ 564


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