BLASTX nr result

ID: Cnidium21_contig00003338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003338
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135154.1| PREDICTED: uncharacterized protein LOC101213...    89   9e-16
ref|XP_002311328.1| predicted protein [Populus trichocarpa] gi|2...    89   9e-16
gb|ACH63243.1| low-temperature inducible [Rheum australe]              89   1e-15
ref|XP_002271911.1| PREDICTED: uncharacterized protein LOC100262...    85   2e-14
gb|AEV43361.1| HAP3-like protein [Citrus sinensis]                     85   2e-14

>ref|XP_004135154.1| PREDICTED: uncharacterized protein LOC101213972 [Cucumis sativus]
           gi|449530179|ref|XP_004172073.1| PREDICTED:
           uncharacterized protein LOC101226038 [Cucumis sativus]
          Length = 143

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 58/121 (47%), Positives = 77/121 (63%), Gaps = 12/121 (9%)
 Frame = -2

Query: 674 KKSDTEGSKKTEG-GAEHPKPSKGELLASAKVVADAA---FGGGKEKNVDKAKVAGAAED 507
           KK  ++ + K E    +H K S  +LL+SAK+VADAA   FGGG E +VDK KVAGA+ D
Sbjct: 5   KKLSSDATDKPEDQNPDHHKTSASDLLSSAKLVADAAKSSFGGGSE-SVDKGKVAGASAD 63

Query: 506 LLQAAEEYGKLGET-GYGKYVDKAEEYLHKYRET------TGHDPPKTGD-AKPAAASGK 351
           LL AA +YGKL  + G G YV+KAE YLH+Y ++      +G +PPK  +  K   A+ K
Sbjct: 64  LLGAASDYGKLNPSEGIGSYVEKAENYLHQYEKSHSAPHGSGSEPPKAEEPPKKENAAEK 123

Query: 350 E 348
           E
Sbjct: 124 E 124


>ref|XP_002311328.1| predicted protein [Populus trichocarpa] gi|222851148|gb|EEE88695.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 55/117 (47%), Positives = 71/117 (60%), Gaps = 17/117 (14%)
 Frame = -2

Query: 632 AEHPK-PSKGELLASAKVVADAA---FGGGKEKNVDKAKVAGAAEDLLQAAEEYGKLGET 465
           AEH + PS  ELLASAK+V++AA   FG  ++K +DK KVA AAEDLL+AA +YGKL E 
Sbjct: 10  AEHDRQPSASELLASAKLVSEAAQASFGNERDK-IDKVKVAAAAEDLLEAASKYGKLEEK 68

Query: 464 GYGKYVDKAEEYLHKYRET-----------TGHDPP--KTGDAKPAAASGKESKSDD 333
           G G+Y++KAE YLH Y  +           +GH  P  K     P +  G + KS D
Sbjct: 69  GLGQYIEKAENYLHHYHSSSQPTTTPSTTGSGHTAPVEKHESPVPPSTGGNDDKSGD 125


>gb|ACH63243.1| low-temperature inducible [Rheum australe]
          Length = 175

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
 Frame = -2

Query: 626 HPKPSKGELLASAKVVADAAFG--GGKEKNVDKAKVAGAAEDLLQAAEEYGKLGET-GYG 456
           H   S  EL+ SAK++A A     GGK  ++DKA+VAGAAE+LL AA+ YGKL ET G G
Sbjct: 21  HEPASNTELMESAKMMAAAVQSAVGGKTSSIDKARVAGAAENLLGAAQRYGKLDETSGIG 80

Query: 455 KYVDKAEEYLHKYRETTGHDPPKTG----DAKPAAASGKESKSDDKHE 324
           KYVDKAE+YLHKY  ++G      G    D  P +  G+  + +DK E
Sbjct: 81  KYVDKAEDYLHKY-HSSGSQHTGAGTEGEDYAPVSDHGRHRREEDKEE 127


>ref|XP_002271911.1| PREDICTED: uncharacterized protein LOC100262861 [Vitis vinifera]
           gi|147815438|emb|CAN63832.1| hypothetical protein
           VITISV_009130 [Vitis vinifera]
          Length = 140

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 10/102 (9%)
 Frame = -2

Query: 629 EHPKPSKGELLASAKVVADAAFGG--GKEKNVDKAKVAGAAEDLLQAAEEYGKLGETGYG 456
           +H +PS  ELL+SAKVVA+AA      + + VDK++VAGAA D+L AA  YGKL E  +G
Sbjct: 15  KHHQPSSSELLSSAKVVAEAAQASFHHESEKVDKSRVAGAAADILGAASHYGKLEEKSFG 74

Query: 455 KYVDKAEEYLHKYRET--------TGHDPPKTGDAKPAAASG 354
           KYV+KAE YLH+Y+ +        +GH    T +   ++ SG
Sbjct: 75  KYVEKAETYLHQYQSSHSTTTTINSGHSTTNTTETHSSSHSG 116


>gb|AEV43361.1| HAP3-like protein [Citrus sinensis]
          Length = 148

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
 Frame = -2

Query: 701 MDAIFGGNDKKSDTEG--SKKTEGGAEHPKPSKGELLASAKVVADAA---FGGGKEKNVD 537
           MD++F     K D++   S       EH +PS  EL+ASAK VA+AA   F    +K VD
Sbjct: 1   MDSLFSKLQNKEDSKSATSHNENPTKEHHQPSNAELMASAKCVAEAAKATFSKESDK-VD 59

Query: 536 KAKVAGAAEDLLQAAEEYGKLGETGYGKYVDKAEEYLHKYRETTGHDPPKTGDAKPAAAS 357
           KAKVAGAAE+L+ A  +YG L E    KYVDKA++YLH+Y   + H   +T  +  +A  
Sbjct: 60  KAKVAGAAENLVAAGSKYGNLEE---NKYVDKAKDYLHQYH--SSHSTAQTDTSGHSAQG 114

Query: 356 GKESKS 339
           G++S S
Sbjct: 115 GRDSSS 120


Top