BLASTX nr result

ID: Cnidium21_contig00003315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003315
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520149.1| hypothetical protein RCOM_0698730 [Ricinus c...   185   8e-45
ref|XP_002312782.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein lig...   177   2e-42
ref|XP_003517921.1| PREDICTED: uncharacterized protein At1g27050...   175   1e-41
ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein lig...   173   3e-41

>ref|XP_002520149.1| hypothetical protein RCOM_0698730 [Ricinus communis]
           gi|223540641|gb|EEF42204.1| hypothetical protein
           RCOM_0698730 [Ricinus communis]
          Length = 195

 Score =  185 bits (470), Expect = 8e-45
 Identities = 113/208 (54%), Positives = 133/208 (63%), Gaps = 14/208 (6%)
 Frame = +1

Query: 34  MSRKRDKPSYTTRHVPYNYPKRRRPFLPITSDDPPE--------NPSPKISTAVIVTGLS 189
           MSRKRD P Y +RH    +PKRRRP  P     PP          P+P+   AV+V GL 
Sbjct: 1   MSRKRDNP-YFSRHDRVPFPKRRRPLPP---HPPPSAEDEIDKPTPTPQSPPAVVVMGLP 56

Query: 190 QDCSVLDLKSRFEIYGSISRTRMDPTGVAYITFRXXXXXXXXXXXXLDPSFGITLNSNRV 369
            +CSVLDLKSRFEIYG ISRTR+D   VA ITFR            LD SFGIT+ S RV
Sbjct: 57  PNCSVLDLKSRFEIYGEISRTRID-RDVALITFRTRDSAEAAIAAALDTSFGITIGSKRV 115

Query: 370 QVMRASDPVPQWREGVRIDG------SSKLLRAEVPLSRHGRFHNRLGSAIVNPRDEDSD 531
           QV+ A+DP+ QWREGV + G      SSKLLR+E+PLSRHGR  N+L SAIVNP+  +SD
Sbjct: 116 QVLWATDPLAQWREGVGVGGNKESGSSSKLLRSEIPLSRHGR-GNKLASAIVNPKSSNSD 174

Query: 532 KKKISMSGPSLEEIPFKGREIVAYDDIL 615
                    S+ ++PFKGREIVAYDDIL
Sbjct: 175 -------ASSVLDVPFKGREIVAYDDIL 195


>ref|XP_002312782.1| predicted protein [Populus trichocarpa] gi|222852602|gb|EEE90149.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  185 bits (469), Expect = 1e-44
 Identities = 106/208 (50%), Positives = 126/208 (60%), Gaps = 14/208 (6%)
 Frame = +1

Query: 34  MSRKRDKPSYTTRHVPYNYPKRRRPFLPITSDDPPENPSPKIST----AVIVTGLSQDCS 201
           MSRKRD+ ++T    P  YPKRRRP  P      P +  P        AV+V  L  DCS
Sbjct: 2   MSRKRDRSNFTRYDRPAPYPKRRRPPPPPPPQSQPNDIKPSTKPPPPPAVVVVDLPPDCS 61

Query: 202 VLDLKSRFEIYGSISRTRMDPTGVAYITFRXXXXXXXXXXXXLDPSFGITLNSNRVQVMR 381
           VLDLKSRF IYG ISRTR+D   + YIT+R            LD SFGI +NS +VQV+R
Sbjct: 62  VLDLKSRFAIYGEISRTRIDRDAIGYITYRSKDSAEAAITASLDSSFGIAINSKKVQVLR 121

Query: 382 ASDPVPQWREGVRIDG----------SSKLLRAEVPLSRHGRFHNRLGSAIVNPRDEDSD 531
           A+DP+ QWREGV   G          SSKLLR  +PLSRHGR  N+L SA+VNP    SD
Sbjct: 122 ATDPLVQWREGVGAGGKRDSGSPSSSSSKLLRGGIPLSRHGR-GNKLASAVVNPTSSSSD 180

Query: 532 KKKISMSGPSLEEIPFKGREIVAYDDIL 615
                  GPS+ ++PFKGREI+AYDDIL
Sbjct: 181 -------GPSVLDVPFKGREIIAYDDIL 201


>ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 577

 Score =  177 bits (450), Expect = 2e-42
 Identities = 105/201 (52%), Positives = 128/201 (63%), Gaps = 8/201 (3%)
 Frame = +1

Query: 34  MSRKRDKPSYTTRHVPYNYPKRRRPFLPITSDDPPENP--SPKISTAVIVTGLSQDCSVL 207
           M RKRDKP Y + H+P + PKRRRP  P T +D  E P   P    A++V  L   CSVL
Sbjct: 1   MGRKRDKP-YPSSHLPTSAPKRRRP-PPSTENDDLEKPVSKPAPPLALVVVDLPSHCSVL 58

Query: 208 DLKSRFEIYGSISRTRMDPTGVAYITFRXXXXXXXXXXXXLDPSFGITLNSNRVQVMRAS 387
           DLKSRFEIYGSISR R+D   V YIT+R            LDPSF  T++S +VQV+ A+
Sbjct: 59  DLKSRFEIYGSISRIRIDRDCVGYITYRTKDSADAAMTAALDPSFAFTIDSKKVQVLWAN 118

Query: 388 DPVPQWREGVRI------DGSSKLLRAEVPLSRHGRFHNRLGSAIVNPRDEDSDKKKISM 549
           DP  QWR+G+ +      + SSKLLRAEVPLSRHGR  N+L SAIVNPR  +S       
Sbjct: 119 DPQVQWRQGINVGVNKNKELSSKLLRAEVPLSRHGR-SNKLASAIVNPRRSNSS------ 171

Query: 550 SGPSLEEIPFKGREIVAYDDI 612
              S  ++PF+GRE+VAYDDI
Sbjct: 172 ---SRSDVPFRGREVVAYDDI 189


>ref|XP_003517921.1| PREDICTED: uncharacterized protein At1g27050-like [Glycine max]
          Length = 218

 Score =  175 bits (443), Expect = 1e-41
 Identities = 109/206 (52%), Positives = 132/206 (64%), Gaps = 5/206 (2%)
 Frame = +1

Query: 13  IQPTKQNMSRKRDKPSYTTRHVPYNYPKRRRPFL-PITSDDPPENPSPKISTAVIVTGLS 189
           I P    MSRKRD+ +Y +RH   +  KRR P   P   + P   P+P   +AV+V GL 
Sbjct: 25  IFPHNTTMSRKRDRSAYFSRH---DAAKRRLPLPEPAEEETPTMRPAPP--SAVVVMGLP 79

Query: 190 QDCSVLDLKSRFEIYGSISRTRMDPTGVAYITFRXXXXXXXXXXXXLDPSFGITLNSNRV 369
           QDCSVLDLKSRFEIYG+ISR R+D   V YIT+R            LDP+FGIT+NS  V
Sbjct: 80  QDCSVLDLKSRFEIYGAISRIRIDRDAVGYITYRTKDSADAAIAAGLDPTFGITVNSKMV 139

Query: 370 QVMRASDPVPQWREGV---RIDGS-SKLLRAEVPLSRHGRFHNRLGSAIVNPRDEDSDKK 537
           QV+ A+DP+  WREGV   R  GS SKL+RAEVPLS+HGR  NRL S I N +  ++   
Sbjct: 140 QVLWATDPLAMWREGVGNSRNKGSMSKLVRAEVPLSKHGR-GNRLASPIGNTKLSEAS-- 196

Query: 538 KISMSGPSLEEIPFKGREIVAYDDIL 615
               SG S+ E+ FKGREIVAYDDIL
Sbjct: 197 ----SGSSVLEVSFKGREIVAYDDIL 218


>ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  173 bits (439), Expect = 3e-41
 Identities = 103/201 (51%), Positives = 127/201 (63%), Gaps = 8/201 (3%)
 Frame = +1

Query: 34  MSRKRDKPSYTTRHVPYNYPKRRRPFLPITSDDPPENP--SPKISTAVIVTGLSQDCSVL 207
           M RKRDKP Y + H+P + PKRRRP  P T +D  E P   P    A++V  L   CSVL
Sbjct: 1   MGRKRDKP-YPSSHLPTSAPKRRRP-PPSTENDDLEKPVSKPAPPLALVVVDLPSHCSVL 58

Query: 208 DLKSRFEIYGSISRTRMDPTGVAYITFRXXXXXXXXXXXXLDPSFGITLNSNRVQVMRAS 387
           DLKSRFEIYGSISR R+D   V YIT+R            LDPSF  T++S +VQV+ A+
Sbjct: 59  DLKSRFEIYGSISRIRIDRDCVGYITYRTKDSADAAMTAALDPSFAFTIDSKKVQVLWAN 118

Query: 388 DPVPQWREGVRI------DGSSKLLRAEVPLSRHGRFHNRLGSAIVNPRDEDSDKKKISM 549
           DP  QW +G+ +      + SSKLL+AEVPLSRHGR  N+L SAIVNPR  +S       
Sbjct: 119 DPQVQWGQGINVGVNKNKELSSKLLQAEVPLSRHGR-SNKLASAIVNPRRSNSS------ 171

Query: 550 SGPSLEEIPFKGREIVAYDDI 612
              S  ++PF+GRE+VAYDDI
Sbjct: 172 ---SRSDVPFRGREVVAYDDI 189


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