BLASTX nr result

ID: Cnidium21_contig00003293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003293
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AET80686.1| spermidine hydroxycinnamoyl transferase [Nicotian...   102   7e-20
ref|XP_002322397.1| predicted protein [Populus trichocarpa] gi|2...    99   6e-19
ref|XP_002300198.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
emb|CAN71181.1| hypothetical protein VITISV_008568 [Vitis vinifera]    96   5e-18
gb|AET80687.1| putative spermidine hydroxycinnamoyl transferase ...    94   2e-17

>gb|AET80686.1| spermidine hydroxycinnamoyl transferase [Nicotiana attenuata]
          Length = 449

 Score =  102 bits (253), Expect = 7e-20
 Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 5/194 (2%)
 Frame = +2

Query: 20  HVVADGYTAAAFTKEWSNTTNGIINDDQLVSSSPINFDLASLVPTRDLSTVIKPAVLPSS 199
           H+  DG+T   F  EW+      +      ++   N+DL  + P RD S ++KP    + 
Sbjct: 167 HIAIDGFTNMKFIYEWAKVCR--LGIPTSTTTDIFNYDLGDIFPARDTSRILKPLASLAI 224

Query: 200 KVKEIKVVTRRFLFDENAISNLKASVIKSESINRPTRVEVVTSVLWKALI-----KQSKL 364
               I  V +RF+F+E +IS L+  +       +P+RVE+VT++LW+ALI     K  +L
Sbjct: 225 PKDTITYVAKRFVFNEASISKLRNKIASGVLSFKPSRVEIVTALLWRALIRASQAKNGRL 284

Query: 365 PSSTLYFHLNFRGKTGINTPPLDNHFSLCGNFYTQVPTRFRGTNETKVDLELHELVKLLR 544
             S + F +N RGK  +  P L + F   GNF  +VP  F   NETK  +ELH L+ L+R
Sbjct: 285 RPSLMSFPVNLRGKASL--PKLSDTF---GNFAVEVPVVFT-PNETK--MELHNLIALIR 336

Query: 545 GKLRNTLKNCSEIS 586
                T+ + ++ S
Sbjct: 337 DATDKTMVSSAKAS 350


>ref|XP_002322397.1| predicted protein [Populus trichocarpa] gi|222869393|gb|EEF06524.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 76/214 (35%), Positives = 112/214 (52%), Gaps = 8/214 (3%)
 Frame = +2

Query: 2   ICMYLSHVVADGYTAAAFTKEWSNTTNGIINDDQLVSSSPINFDLASLVPTRDLSTVIKP 181
           I + ++H VAD YT   F + W+      +  D+++ +   +F L S  P+RD  T+  P
Sbjct: 147 IGLCVTHRVADAYTVFTFVRTWATACK--LGVDEVLHAP--SFQLPSFFPSRD--TISSP 200

Query: 182 AVLPSSKVKEIKVVTRRFLFDENAISNLKASVIKSESIN---RPTRVEVVTSVLWKAL-- 346
                    +I VV +RF+F   A+S LKA V  S S+N   +PTRVEVVT+V+WK L  
Sbjct: 201 NRFIGRNHHKI-VVMKRFVFTGAALSKLKAVV--SASVNGSHQPTRVEVVTAVIWKTLTM 257

Query: 347 ---IKQSKLPSSTLYFHLNFRGKTGINTPPLDNHFSLCGNFYTQVPTRFRGTNETKVDLE 517
               K  +L  S L    N RGK  +  P  DN    CGNF     + F   +ETKV  +
Sbjct: 258 VAQAKHGRLRPSLLSHTFNMRGKIAMPIP--DNS---CGNFINVALSHFTADDETKV--Q 310

Query: 518 LHELVKLLRGKLRNTLKNCSEISTADGLFLEAAK 619
           LH+ V  +   ++N + +C+ +S+ D LF+ A K
Sbjct: 311 LHDFVDRVYNGIKNMVSDCARVSSDDELFVMAEK 344


>ref|XP_002300198.1| predicted protein [Populus trichocarpa] gi|222847456|gb|EEE85003.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 72/203 (35%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
 Frame = +2

Query: 14  LSHVVADGYTAAAFTKEWSNTTNGIINDDQLVSSSPINFDLASLVPTRDLSTVIKPAVLP 193
           +SH VADG+T  AF K W+      +++  ++  S   FD  +L P  D+     P    
Sbjct: 155 ISHRVADGHTMGAFLKAWATACRAGMHE--MIRPS---FDAGALFPATDVLRFGTPVPRD 209

Query: 194 SSKVKEIKVVTRRFLFDENAISNLKASVIK----SESINRPTRVEVVTSVLWKALI---- 349
                  ++VT+RF+FD   IS+LKA V+     S+    P+RVEVVT++LWKALI    
Sbjct: 210 HGS----QIVTKRFVFDGEKISSLKAKVMSYARDSDVKRPPSRVEVVTALLWKALIGVAQ 265

Query: 350 -KQSKLPSSTLYFHLNFRGKTGINTPPLDNHFSLCGNFYTQVPTRFRGTNETKVDLELHE 526
            K  KL  S L   LN RGK  ++    +N F   GN Y  V  RF   N  +   E+H 
Sbjct: 266 AKHGKLRPSLLTLPLNLRGK--VDLLITENSF---GNLYRMVGVRF---NPKESSSEMHH 317

Query: 527 LVKLLRGKLRNTLKNCSEISTAD 595
           LV LL   +    K+C ++  +D
Sbjct: 318 LVSLLNDAVNKANKDCEQVVNSD 340


>emb|CAN71181.1| hypothetical protein VITISV_008568 [Vitis vinifera]
          Length = 392

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 72/183 (39%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
 Frame = +2

Query: 14  LSHVVADGYTAAAFTKEWSNTTNGIINDDQLVSSSPINFDLASLVPTRDLSTVIKPAVLP 193
           + H V DG+TAA F   W+  +   I  D+++  S   FDLASL+P +DL  ++KP   P
Sbjct: 114 IRHSVVDGFTAAHFISAWATASREGI--DEVIWPS---FDLASLLPAKDLP-MVKPR--P 165

Query: 194 SSKVKEI-KVVTRRFLFDENAISNLKASVIKSESINRPTRVEVVTSVLWKALI-----KQ 355
           S K+    KVVTRRF+FD   IS+LKA+         P+RVE VT+++W+AL+     K 
Sbjct: 166 SPKIFGADKVVTRRFIFDGANISSLKAAACGPSFKREPSRVEAVTALIWRALMAVSRAKH 225

Query: 356 SKLPSSTLYFHLNFRGKTGINTPPLDNHFSLCGNFYTQVPTRFRGTNETKVDLELHELVK 535
            +L +S     +N R K     PPL      CGN YT+V   F   +       L ELV 
Sbjct: 226 GRLRTSLASHAMNLREKF---VPPLPG--ICCGNLYTEVTATFMADSSKTELPNLKELVG 280

Query: 536 LLR 544
           LLR
Sbjct: 281 LLR 283


>gb|AET80687.1| putative spermidine hydroxycinnamoyl transferase [Nicotiana
           attenuata]
          Length = 442

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 5/200 (2%)
 Frame = +2

Query: 2   ICMYLSHVVADGYTAAAFTKEWSNTTNGIINDDQLVSSSPINFDLASLVPTRDLSTVIKP 181
           + M  +H+  DG+++ +F  EWS      I   ++   + + F+L  + PTRDLS ++ P
Sbjct: 157 LSMSHAHIAMDGFSSLSFLYEWSKVCRLGIPTKEI---NFLRFNLGEIFPTRDLSKLLLP 213

Query: 182 AVLPSSKVKEIKVVTRRFLFDENAISNLKASVIKSESINRPTRVEVVTSVLWKALIKQSK 361
            + P  K  E K+V +R   DE+AIS L+  +       +PTRVE++T+VLW+ALI+ S+
Sbjct: 214 RI-PGEKRAESKLVAKRLYIDESAISKLREEMTGLSF--KPTRVEMITAVLWRALIRASE 270

Query: 362 -----LPSSTLYFHLNFRGKTGINTPPLDNHFSLCGNFYTQVPTRFRGTNETKVDLELHE 526
                +  S +   +N R K  I+ P ++  F   GN     P +F    ETK  +EL+ 
Sbjct: 271 AKNINIRRSLMGIPVNLRSK--ISLPQIEKCF---GNLVVDSPVKFVPV-ETK--MELNN 322

Query: 527 LVKLLRGKLRNTLKNCSEIS 586
           LV L+R  ++ T++ C++ S
Sbjct: 323 LVALIRDTVQKTIEYCNKES 342


Top