BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003256
         (1480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]       502   e-139
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...   499   e-139
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]           494   e-137
ref|XP_002313840.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136
ref|XP_002330321.1| predicted protein [Populus trichocarpa] gi|2...   487   e-135

>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
          Length = 482

 Score =  502 bits (1292), Expect = e-139
 Identities = 248/331 (74%), Positives = 283/331 (85%), Gaps = 4/331 (1%)
 Frame = +3

Query: 138  QIQPSSEDNKTIWIGDLQGWMDEAYLQSCFAPSGEAISVKLIRNKQTGQSEKFGFIEFLS 317
            QIQ SSEDNKTIWIGDLQ WMDE+YL SCF+ +GE ISVK+IRNKQTGQSE++GF+EF +
Sbjct: 129  QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 188

Query: 318  HAAAEKILQSYNGTLMPNTDQAFRLNWSTFSSGERRQDGGSDLSIFVGDLAADVTDAMLH 497
            HAAAEK+LQSYNGT+MPN +Q FRLNW+ FS+GE+R + GSD SIFVGDLA+DVTD ML 
Sbjct: 189  HAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLR 248

Query: 498  ETFASRYSSVKGAKVVVDANTGRPKGYGFVRFGDENEKSRAMTEMNGQYCSSRPMRISIA 677
            +TFASRY S+KGAKVVVDANTG  KGYGFVRFGDE+E+SRAMTEMNG YCSSR MRI +A
Sbjct: 249  DTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVA 308

Query: 678  TPKKPSTPQQQYSSQAVILSGGAAAANGAFTQGSQSDGDTSNTTVFVGGLDSDVGDEELR 857
            TPKKPS  QQQYSSQAVILSGG  A+NGA T GSQSDGD SNTT+FVGGLDSDV DEELR
Sbjct: 309  TPKKPSA-QQQYSSQAVILSGG-YASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELR 366

Query: 858  HTFSQFGEVVSVKIPIGKGCGFVQFADRASAENSINQLNGTAIGKQTVRLSWGRNPGNKQ 1037
             +F+QFGEVVSVKIP GKGCGFVQF+DR+SA+ +I +L+G  IGKQ VRLSWGR+P NKQ
Sbjct: 367  QSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 426

Query: 1038 FRGESG----GNFYGKQGYNGYGYTAPQNQD 1118
             R +SG    G + G+Q Y GYGY A QNQD
Sbjct: 427  MRADSGSQWNGGYNGRQNYGGYGYGASQNQD 457


>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
            Short=Poly(A)-binding protein RBP47; AltName:
            Full=RNA-binding protein 47; Short=NplRBP47
            gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
            [Nicotiana plumbaginifolia]
          Length = 428

 Score =  499 bits (1284), Expect = e-139
 Identities = 246/331 (74%), Positives = 284/331 (85%), Gaps = 4/331 (1%)
 Frame = +3

Query: 138  QIQPSSEDNKTIWIGDLQGWMDEAYLQSCFAPSGEAISVKLIRNKQTGQSEKFGFIEFLS 317
            QIQ SSEDNKTIWIGDLQ WMDE+YL SCF+ +GE ISVK+IRNKQTGQSE++GF+EF +
Sbjct: 75   QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 134

Query: 318  HAAAEKILQSYNGTLMPNTDQAFRLNWSTFSSGERRQDGGSDLSIFVGDLAADVTDAMLH 497
            HAAAEK+LQSYNGT+MPNT+Q FRLNW+ FS+GE+R + GSD SIFVGDLA+DVTD ML 
Sbjct: 135  HAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLR 194

Query: 498  ETFASRYSSVKGAKVVVDANTGRPKGYGFVRFGDENEKSRAMTEMNGQYCSSRPMRISIA 677
            +TFASRY S+KGAKVVVDANTG  KGYGFVRFGDE+E+SRAMTEMNG YCSSR MRI +A
Sbjct: 195  DTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVA 254

Query: 678  TPKKPSTPQQQYSSQAVILSGGAAAANGAFTQGSQSDGDTSNTTVFVGGLDSDVGDEELR 857
            TPKKPS   +QYSSQAVILSGG  A+NGA T GSQSDGD+SNTT+FVGGLDS+V DEELR
Sbjct: 255  TPKKPSA-HEQYSSQAVILSGG-YASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELR 312

Query: 858  HTFSQFGEVVSVKIPIGKGCGFVQFADRASAENSINQLNGTAIGKQTVRLSWGRNPGNKQ 1037
             +F+QFGEVVSVKIP GKGCGFVQF+DR+SA+ +I +L+G  IGKQ VRLSWGR+P NKQ
Sbjct: 313  QSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 372

Query: 1038 FRGESG----GNFYGKQGYNGYGYTAPQNQD 1118
             R +SG    G + G+Q Y GYGY A QNQD
Sbjct: 373  MRTDSGSQWNGGYNGRQNYGGYGYGASQNQD 403


>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
          Length = 428

 Score =  494 bits (1272), Expect = e-137
 Identities = 247/331 (74%), Positives = 281/331 (84%), Gaps = 4/331 (1%)
 Frame = +3

Query: 138  QIQPSSEDNKTIWIGDLQGWMDEAYLQSCFAPSGEAISVKLIRNKQTGQSEKFGFIEFLS 317
            QIQ SSEDNKTIWIGDLQ WMDE+YL SCF+ +GE ISVK+IRNKQTGQSE++GF+EF +
Sbjct: 75   QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 134

Query: 318  HAAAEKILQSYNGTLMPNTDQAFRLNWSTFSSGERRQDGGSDLSIFVGDLAADVTDAMLH 497
            HAAAEK+LQSYNGT+MPN +Q FRLNW+ FS+GE+R + GSD SIFVGDLA+DVTD ML 
Sbjct: 135  HAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLR 194

Query: 498  ETFASRYSSVKGAKVVVDANTGRPKGYGFVRFGDENEKSRAMTEMNGQYCSSRPMRISIA 677
            +TFASRY S+KGAKVVVDANTG  KGYGFVRFGDE+E+SRAMTEMNG YCSSR MRI +A
Sbjct: 195  DTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVA 254

Query: 678  TPKKPSTPQQQYSSQAVILSGGAAAANGAFTQGSQSDGDTSNTTVFVGGLDSDVGDEELR 857
            TPKKPS  QQQYSSQAVILSGG  A+NGA T GSQSDGD SNTT+FVGGLDSDV DEELR
Sbjct: 255  TPKKPSA-QQQYSSQAVILSGG-YASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELR 312

Query: 858  HTFSQFGEVVSVKIPIGKGCGFVQFADRASAENSINQLNGTAIGKQTVRLSWGRNPGNKQ 1037
             +F+QFGEVVSVKIP GKGCGFVQF+DR+SA+ +I +L+G  IGKQ VRLSWGR   NKQ
Sbjct: 313  QSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRT-ANKQ 371

Query: 1038 FRGESG----GNFYGKQGYNGYGYTAPQNQD 1118
             R +SG    G + G+Q Y GYGY A QNQD
Sbjct: 372  MRADSGSQWNGGYNGRQNYGGYGYGASQNQD 402


>ref|XP_002313840.1| predicted protein [Populus trichocarpa] gi|222850248|gb|EEE87795.1|
            predicted protein [Populus trichocarpa]
          Length = 412

 Score =  489 bits (1259), Expect = e-136
 Identities = 237/331 (71%), Positives = 280/331 (84%), Gaps = 4/331 (1%)
 Frame = +3

Query: 138  QIQPSSEDNKTIWIGDLQGWMDEAYLQSCFAPSGEAISVKLIRNKQTGQSEKFGFIEFLS 317
            Q Q S+E+ KT+W+GDL  WMDE YL +CF+ +GE  SVK+IRNKQTGQ E +GF+EF S
Sbjct: 71   QQQGSNEEAKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYS 130

Query: 318  HAAAEKILQSYNGTLMPNTDQAFRLNWSTFSSGERRQDGGSDLSIFVGDLAADVTDAMLH 497
            HAAAEK+LQSY+G++MPNTDQ FRLNW++F+ GERR D GSDLSIFVGDLAADVTDAML 
Sbjct: 131  HAAAEKVLQSYSGSMMPNTDQPFRLNWASFA-GERRADAGSDLSIFVGDLAADVTDAMLQ 189

Query: 498  ETFASRYSSVKGAKVVVDANTGRPKGYGFVRFGDENEKSRAMTEMNGQYCSSRPMRISIA 677
            ETFA++Y+SVKGAKVV D+NTGR KGYGFVRFGDENEK+RA+TEMNG YCSSRPMRI +A
Sbjct: 190  ETFATKYASVKGAKVVADSNTGRSKGYGFVRFGDENEKTRAITEMNGAYCSSRPMRIGVA 249

Query: 678  TPKKPSTPQQQYSSQAVILSGGAAAANGAFTQGSQSDGDTSNTTVFVGGLDSDVGDEELR 857
            TPKKPS  QQQYSSQA++L+GG  A+NG   QGSQSDGD++NTT+FVGG+DSDV DE+LR
Sbjct: 250  TPKKPSAYQQQYSSQALVLAGG-HASNGTMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLR 308

Query: 858  HTFSQFGEVVSVKIPIGKGCGFVQFADRASAENSINQLNGTAIGKQTVRLSWGRNPGNKQ 1037
              FSQFGEVVSVK+P GKGC FVQFA+R +AE+++  LNGT IGKQTVRLSWGR P NKQ
Sbjct: 309  QPFSQFGEVVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQ 368

Query: 1038 FRGESG----GNFYGKQGYNGYGYTAPQNQD 1118
            +RG+ G    G ++G QGY GYGY  P NQD
Sbjct: 369  WRGDHGNQWHGAYFGGQGYAGYGYAMPPNQD 399


>ref|XP_002330321.1| predicted protein [Populus trichocarpa] gi|222871356|gb|EEF08487.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  487 bits (1254), Expect = e-135
 Identities = 237/331 (71%), Positives = 280/331 (84%), Gaps = 4/331 (1%)
 Frame = +3

Query: 138  QIQPSSEDNKTIWIGDLQGWMDEAYLQSCFAPSGEAISVKLIRNKQTGQSEKFGFIEFLS 317
            Q Q S+E+ KTIW+GDL  WMDEAYL +CF+ +GE  SVK+IRNKQTGQ E +GF+EF S
Sbjct: 56   QQQGSNEEAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYS 115

Query: 318  HAAAEKILQSYNGTLMPNTDQAFRLNWSTFSSGERRQDGGSDLSIFVGDLAADVTDAMLH 497
             AAAEK+LQSY+G++MPNT+Q FRLNW++F+ GERR D GSDLSIFVGDLAADVTD+ML 
Sbjct: 116  RAAAEKVLQSYSGSMMPNTEQPFRLNWASFA-GERRADPGSDLSIFVGDLAADVTDSMLQ 174

Query: 498  ETFASRYSSVKGAKVVVDANTGRPKGYGFVRFGDENEKSRAMTEMNGQYCSSRPMRISIA 677
            ETFA +Y SVKGAKVV+D+NTGR KGYGFVRFGDENEK+RAM EMNG +CSSRPMRI +A
Sbjct: 175  ETFAGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVA 234

Query: 678  TPKKPSTPQQQYSSQAVILSGGAAAANGAFTQGSQSDGDTSNTTVFVGGLDSDVGDEELR 857
            TPKKPS  QQQYSSQA++L+GG  A+NGA  QGSQSDGD++NTT+FVGG+DSDV DE+LR
Sbjct: 235  TPKKPSAYQQQYSSQALVLAGG-HASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLR 293

Query: 858  HTFSQFGEVVSVKIPIGKGCGFVQFADRASAENSINQLNGTAIGKQTVRLSWGRNPGNKQ 1037
              FSQFGEVVSVKIP+GKGC FVQFA+R +AE+++  LNGT IGKQTVRLSWGR P NKQ
Sbjct: 294  QPFSQFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQ 353

Query: 1038 FRGESG----GNFYGKQGYNGYGYTAPQNQD 1118
            +RG+ G    G ++G QGY GYGY  P NQD
Sbjct: 354  WRGDHGNQWHGGYFGGQGYAGYGYAMPPNQD 384