BLASTX nr result

ID: Cnidium21_contig00003229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003229
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis]          228   9e-58
ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrat...   222   8e-56
gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum t...   221   1e-55
gb|AFK42207.1| unknown [Medicago truncatula]                          221   1e-55
gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]            221   2e-55

>gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis]
          Length = 149

 Score =  228 bits (582), Expect = 9e-58
 Identities = 116/122 (95%), Positives = 120/122 (98%)
 Frame = -1

Query: 716 MGRVRTKTVKKSSRQVIEKYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 537
           MGRVR KTVKKSSRQVIE+YYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRXKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 536 IQKGPVRGISLKLQEEERERRMDFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLK 357
           IQKGPVRGISLKLQEEERERRMDFVPDESAI+TD IEVDKETIDLLASLGMSE+PG+VLK
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDHIEVDKETIDLLASLGMSEMPGVVLK 120

Query: 356 EE 351
           EE
Sbjct: 121 EE 122


>ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]
           gi|297317044|gb|EFH47466.1| 40S ribosomal protein S17
           [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score =  222 bits (565), Expect = 8e-56
 Identities = 115/130 (88%), Positives = 122/130 (93%), Gaps = 2/130 (1%)
 Frame = -1

Query: 716 MGRVRTKTVKKSSRQVIEKYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 537
           MGRVRTKTVKKSSRQVIEKYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 536 IQKGPVRGISLKLQEEERERRMDFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLK 357
           IQKGPVRGISLKLQEEERERRMDFVPDESAI+TD IEVDKET+++LASLGMSELPG+V  
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDHIEVDKETLEMLASLGMSELPGVVKV 120

Query: 356 E--EQAPVVA 333
           +    APV A
Sbjct: 121 DPAAAAPVAA 130


>gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum tuberosum]
          Length = 144

 Score =  221 bits (564), Expect = 1e-55
 Identities = 112/128 (87%), Positives = 121/128 (94%)
 Frame = -1

Query: 716 MGRVRTKTVKKSSRQVIEKYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 537
           MGRVRTKTVKKSSRQVIE+YYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 536 IQKGPVRGISLKLQEEERERRMDFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLK 357
           IQKGPVRGISLKLQEEERERRMDFVPDESAI+TD IEVDKET+D+L+SLGMS+LPG+V +
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSSLGMSDLPGVVKQ 120

Query: 356 EEQAPVVA 333
             +   VA
Sbjct: 121 AAEPQAVA 128


>gb|AFK42207.1| unknown [Medicago truncatula]
          Length = 144

 Score =  221 bits (563), Expect = 1e-55
 Identities = 112/131 (85%), Positives = 123/131 (93%)
 Frame = -1

Query: 716 MGRVRTKTVKKSSRQVIEKYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 537
           MGRVRTKTVKKSSRQVIE+YYSKMTLDFHTNKKILEEVA+IPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKR 60

Query: 536 IQKGPVRGISLKLQEEERERRMDFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLK 357
           IQKGPVRGISLKLQEEERERRMDFVPD SAIRTD IEVDKET+D+LA+LGMSE+PG+V +
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDVSAIRTDHIEVDKETLDMLAALGMSEIPGVV-Q 119

Query: 356 EEQAPVVAMPY 324
            +  PV  +P+
Sbjct: 120 VDPVPVQQVPF 130


>gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]
          Length = 145

 Score =  221 bits (562), Expect = 2e-55
 Identities = 113/132 (85%), Positives = 123/132 (93%), Gaps = 2/132 (1%)
 Frame = -1

Query: 716 MGRVRTKTVKKSSRQVIEKYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 537
           MGRVRTKTVKKSSRQVIE+YYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 536 IQKGPVRGISLKLQEEERERRMDFVPDESAIRTDRIEVDKETIDLLASLGMSELPGIVLK 357
           IQKGPVRGISLKLQEEERERRMDFVPDESAI+TD IEVDKET+D+L++LGM+ELPG+V +
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMAELPGVVKQ 120

Query: 356 --EEQAPVVAMP 327
             E QA    +P
Sbjct: 121 AAEPQAVAATLP 132


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