BLASTX nr result

ID: Cnidium21_contig00003228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003228
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum t...   109   8e-22
gb|ADR71227.1| 40S ribosomal protein S17A [Hevea brasiliensis]        109   8e-22
ref|XP_002526912.1| 40S ribosomal protein S17, putative [Ricinus...   109   8e-22
ref|XP_002530169.1| 40S ribosomal protein S17, putative [Ricinus...   109   8e-22
ref|XP_002316489.1| predicted protein [Populus trichocarpa] gi|2...   109   8e-22

>gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum tuberosum]
          Length = 144

 Score =  109 bits (272), Expect = 8e-22
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = -1

Query: 703 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 539
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 55



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 26/46 (56%), Positives = 37/46 (80%)
 Frame = -2

Query: 396 PDESAIRTDHIEVDKETIELLATLGMSDIPGIVLKEEQAPVAAVVP 259
           PDESAI+TD IEVDKET+++L++LGMSD+PG+V +  +    A +P
Sbjct: 86  PDESAIKTDLIEVDKETLDMLSSLGMSDLPGVVKQAAEPQAVAALP 131


>gb|ADR71227.1| 40S ribosomal protein S17A [Hevea brasiliensis]
          Length = 143

 Score =  109 bits (272), Expect = 8e-22
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = -1

Query: 703 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 539
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 55


>ref|XP_002526912.1| 40S ribosomal protein S17, putative [Ricinus communis]
           gi|223533731|gb|EEF35465.1| 40S ribosomal protein S17,
           putative [Ricinus communis]
          Length = 144

 Score =  109 bits (272), Expect = 8e-22
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = -1

Query: 703 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 539
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 55


>ref|XP_002530169.1| 40S ribosomal protein S17, putative [Ricinus communis]
           gi|223530330|gb|EEF32224.1| 40S ribosomal protein S17,
           putative [Ricinus communis]
          Length = 144

 Score =  109 bits (272), Expect = 8e-22
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = -1

Query: 703 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 539
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 55


>ref|XP_002316489.1| predicted protein [Populus trichocarpa] gi|222865529|gb|EEF02660.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  109 bits (272), Expect = 8e-22
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = -1

Query: 703 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 539
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFST 55


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