BLASTX nr result
ID: Cnidium21_contig00003227
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00003227
(1551 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro... 796 0.0
ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|2... 793 0.0
ref|XP_002523404.1| rubisco subunit binding-protein beta subunit... 787 0.0
ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|1... 777 0.0
gb|AAB39827.1| chaperonin-60 beta subunit [Solanum tuberosum] 775 0.0
>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Vitis vinifera]
gi|297746501|emb|CBI16557.3| unnamed protein product
[Vitis vinifera]
Length = 608
Score = 796 bits (2055), Expect = 0.0
Identities = 424/490 (86%), Positives = 446/490 (91%), Gaps = 1/490 (0%)
Frame = -1
Query: 1467 MASTFAAMSSVGSLITPSGSVIDKKLGXXXXXXXXXXXXXSCPFGKRQSIVVRKTR-PLV 1291
MAS F MSSVGSL P G +DKKL S FG+RQ++V+R+TR P +
Sbjct: 1 MASAFTTMSSVGSLAAPGGRGMDKKLATSSDRLSSFASISSSSFGRRQNVVLRRTRSPRI 60
Query: 1290 TAAAKELYFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 1111
A AK+LYFNKDGSAIKKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
Sbjct: 61 NAMAKDLYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120
Query: 1110 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 931
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180
Query: 930 RGIEKTTKALVTELKLMSKEVEDGELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLE 751
RGIEKTTK+LV ELKL+SKEVED ELADVAAVSAGNN+E+GNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTTKSLVAELKLISKEVEDSELADVAAVSAGNNHEVGNMIAEAMSKVGRKGVVTLE 240
Query: 750 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKVTNARDLVNVLE 571
EGKSAEN LYVVEGMQFDRGYISPYFVTDSEKM VE+ENCKLLLVDKK+TNARDL+NVLE
Sbjct: 241 EGKSAENHLYVVEGMQFDRGYISPYFVTDSEKMAVEFENCKLLLVDKKITNARDLINVLE 300
Query: 570 DAIRGSYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGG 391
DAIRG YPILIIAEDIEQEALATLVVNKLRG+LKIAALKAPGFGERKSQYLDDIAILTGG
Sbjct: 301 DAIRGGYPILIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGG 360
Query: 390 TVIREEVGLTLDKADKDVLGHAAKVVLTKDATTIVGDGSTQEAVNKRVSQIRNLIEAAEQ 211
TVIR+EVGLTLDKA+K+VLGHAAKVVLTKD TTIVGDGSTQEAVNKRV+QIRNLIEAAEQ
Sbjct: 361 TVIRDEVGLTLDKAEKEVLGHAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQ 420
Query: 210 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCT 31
+YEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCT
Sbjct: 421 EYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480
Query: 30 LLRLAAKVDA 1
LLRLA+KVDA
Sbjct: 481 LLRLASKVDA 490
>ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|222841415|gb|EEE78962.1|
predicted protein [Populus trichocarpa]
Length = 607
Score = 793 bits (2047), Expect = 0.0
Identities = 419/489 (85%), Positives = 445/489 (91%)
Frame = -1
Query: 1467 MASTFAAMSSVGSLITPSGSVIDKKLGXXXXXXXXXXXXXSCPFGKRQSIVVRKTRPLVT 1288
MASTF AMSSVG+L P+G V+DKK + FG+ Q++V+ ++RPL
Sbjct: 1 MASTFTAMSSVGTLAAPNGRVMDKKFVFSSNKLSSFASISASRFGRPQNVVLPRSRPLKV 60
Query: 1287 AAAKELYFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK 1108
AAKEL+FNKDGSAIKKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK
Sbjct: 61 NAAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK 120
Query: 1107 EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 928
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
Sbjct: 121 EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 180
Query: 927 GIEKTTKALVTELKLMSKEVEDGELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEE 748
GIEKTT+ALV ELKLMSKEVED ELADVAAVSAGNNYE+GNMIAEAMSKVGRKGVVTLEE
Sbjct: 181 GIEKTTRALVNELKLMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 240
Query: 747 GKSAENSLYVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKVTNARDLVNVLED 568
GKSA+NSLYVVEGMQFDRGYISPYFVTDSEKM+VEYENCKLLLVDKK+TNARDL+++LED
Sbjct: 241 GKSADNSLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKITNARDLISILED 300
Query: 567 AIRGSYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT 388
AIR YP+LIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
Sbjct: 301 AIRAGYPVLIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT 360
Query: 387 VIREEVGLTLDKADKDVLGHAAKVVLTKDATTIVGDGSTQEAVNKRVSQIRNLIEAAEQD 208
V+REEVGL LDK K+VLGHA+KVVLTKD TTIVGDGSTQEAVNKRV+QIRNLIEAAEQD
Sbjct: 361 VVREEVGLALDKVGKEVLGHASKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQD 420
Query: 207 YEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCTL 28
YE+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCTL
Sbjct: 421 YEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL 480
Query: 27 LRLAAKVDA 1
LRLA+KVDA
Sbjct: 481 LRLASKVDA 489
>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus
communis] gi|223537354|gb|EEF38983.1| rubisco subunit
binding-protein beta subunit, rubb, putative [Ricinus
communis]
Length = 605
Score = 787 bits (2033), Expect = 0.0
Identities = 418/490 (85%), Positives = 445/490 (90%), Gaps = 1/490 (0%)
Frame = -1
Query: 1467 MASTFAAMSSVGSLITPSGSVIDKKLGXXXXXXXXXXXXXSCPFGKRQSIVVRKTR-PLV 1291
MASTF AMSSVGSL+ P+ +DKK FG+RQ++V+R++R P +
Sbjct: 1 MASTFTAMSSVGSLVAPN---VDKKFASTSNRLSSFASISGSAFGRRQNVVLRRSRSPKI 57
Query: 1290 TAAAKELYFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 1111
A AK+L+FNKDGSAIKKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
Sbjct: 58 CAMAKDLHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 117
Query: 1110 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 931
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 118 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 177
Query: 930 RGIEKTTKALVTELKLMSKEVEDGELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLE 751
RGIEKT+KALVTELK MSKEVED ELADVAAVSAGNNYE+GNMIAEAMS+VGRKGVVTLE
Sbjct: 178 RGIEKTSKALVTELKSMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSRVGRKGVVTLE 237
Query: 750 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKVTNARDLVNVLE 571
EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKM VEYENCKLLLVDKK+TNARDL+N+LE
Sbjct: 238 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILE 297
Query: 570 DAIRGSYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGG 391
DAIRG YPIL+IAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGG
Sbjct: 298 DAIRGGYPILVIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGG 357
Query: 390 TVIREEVGLTLDKADKDVLGHAAKVVLTKDATTIVGDGSTQEAVNKRVSQIRNLIEAAEQ 211
TV+REEVGL+LDK K++LG+A+KVVLTKD TTIVGDGSTQEAV KRV+QIRNLIEAAEQ
Sbjct: 358 TVVREEVGLSLDKVGKEILGNASKVVLTKDTTTIVGDGSTQEAVTKRVAQIRNLIEAAEQ 417
Query: 210 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCT 31
DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCT
Sbjct: 418 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 477
Query: 30 LLRLAAKVDA 1
LLRLA+KVDA
Sbjct: 478 LLRLASKVDA 487
>ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|118486341|gb|ABK95011.1|
unknown [Populus trichocarpa] gi|222844875|gb|EEE82422.1|
predicted protein [Populus trichocarpa]
Length = 607
Score = 777 bits (2007), Expect = 0.0
Identities = 409/489 (83%), Positives = 438/489 (89%)
Frame = -1
Query: 1467 MASTFAAMSSVGSLITPSGSVIDKKLGXXXXXXXXXXXXXSCPFGKRQSIVVRKTRPLVT 1288
MASTF AMSS G+L P+ +DKK + FG+ Q++V+ ++R L
Sbjct: 1 MASTFTAMSSAGTLAAPNARALDKKFAFSSNKLSSFASISASRFGRPQNVVLPRSRSLKV 60
Query: 1287 AAAKELYFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK 1108
AAKEL+FNKDGSAI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK
Sbjct: 61 NAAKELHFNKDGSAIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK 120
Query: 1107 EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 928
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
Sbjct: 121 EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 180
Query: 927 GIEKTTKALVTELKLMSKEVEDGELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEE 748
GIEKTT+ALV ELKLMSKEVED ELADVAAVSAGNNYE+GNMIAEAMSKVGRKGVVTLEE
Sbjct: 181 GIEKTTRALVNELKLMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 240
Query: 747 GKSAENSLYVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKVTNARDLVNVLED 568
GKSA+NSLYVVEGMQFDRGYISPYFVTDSEKM VEY+NCKLLLVDKK+TNARDL+ +LED
Sbjct: 241 GKSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEYDNCKLLLVDKKITNARDLIAILED 300
Query: 567 AIRGSYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT 388
AI+G YP++I+AEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
Sbjct: 301 AIKGGYPVVIVAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT 360
Query: 387 VIREEVGLTLDKADKDVLGHAAKVVLTKDATTIVGDGSTQEAVNKRVSQIRNLIEAAEQD 208
V+REEVGL LDK +VLGHA+KVVLTKD TTIV DGSTQEAVNKRV+QI+NLIEAAEQD
Sbjct: 361 VVREEVGLALDKVGSEVLGHASKVVLTKDTTTIVADGSTQEAVNKRVAQIKNLIEAAEQD 420
Query: 207 YEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCTL 28
YEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCTL
Sbjct: 421 YEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL 480
Query: 27 LRLAAKVDA 1
LRLA+KVDA
Sbjct: 481 LRLASKVDA 489
>gb|AAB39827.1| chaperonin-60 beta subunit [Solanum tuberosum]
Length = 599
Score = 775 bits (2000), Expect = 0.0
Identities = 419/490 (85%), Positives = 440/490 (89%), Gaps = 1/490 (0%)
Frame = -1
Query: 1467 MASTFAAMSSVGSLITPSGSVIDKKLGXXXXXXXXXXXXXSCPFGKRQSIVVRKTR-PLV 1291
MASTFA MSS G L PS S KL FG ++++ +RK+R P +
Sbjct: 1 MASTFAGMSSAGPLAAPSTS--SNKLSSVANISSTS-------FGSKRNVALRKSRRPTI 51
Query: 1290 TAAAKELYFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 1111
AAAKEL+FNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYG+PKIVNDGVTVA
Sbjct: 52 LAAAKELHFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVA 111
Query: 1110 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 931
+EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 112 REVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 171
Query: 930 RGIEKTTKALVTELKLMSKEVEDGELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLE 751
RGIEKT KALV ELK MSKEVED ELADVAAVSAGNN E+G+MIAEAMSKVGRKGVVTLE
Sbjct: 172 RGIEKTAKALVAELKNMSKEVEDSELADVAAVSAGNNLEVGSMIAEAMSKVGRKGVVTLE 231
Query: 750 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKVTNARDLVNVLE 571
EGKSAENSL VVEGMQFDRGY+SPYFVTDSEKM+VEYENCKLLLVDKK+TNARDLVNVLE
Sbjct: 232 EGKSAENSLRVVEGMQFDRGYVSPYFVTDSEKMSVEYENCKLLLVDKKITNARDLVNVLE 291
Query: 570 DAIRGSYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGG 391
DAIR YPILIIAEDIEQEALATLVVNKLRGALK+AALKAPGFGERKSQYLDDIA LTGG
Sbjct: 292 DAIRNGYPILIIAEDIEQEALATLVVNKLRGALKVAALKAPGFGERKSQYLDDIATLTGG 351
Query: 390 TVIREEVGLTLDKADKDVLGHAAKVVLTKDATTIVGDGSTQEAVNKRVSQIRNLIEAAEQ 211
TVIREE+GLTLDKADK+VLGHAAKVVLTKDATTIVGDGSTQEAVNKRV+QI+NLIEAA+Q
Sbjct: 352 TVIREELGLTLDKADKEVLGHAAKVVLTKDATTIVGDGSTQEAVNKRVAQIKNLIEAADQ 411
Query: 210 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCT 31
DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCT
Sbjct: 412 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 471
Query: 30 LLRLAAKVDA 1
LLRLAAKVDA
Sbjct: 472 LLRLAAKVDA 481