BLASTX nr result

ID: Cnidium21_contig00003219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003219
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31844.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002274961.1| PREDICTED: traB domain-containing protein-li...   132   4e-29
emb|CAN73376.1| hypothetical protein VITISV_019101 [Vitis vinifera]   129   2e-28
ref|XP_003536482.1| PREDICTED: traB domain-containing protein-li...   123   2e-26
ref|XP_002318253.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25

>emb|CBI31844.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/99 (65%), Positives = 76/99 (76%)
 Frame = -1

Query: 299 SNTLKESSSDNSNFQLYEXXXXXXXXXXXXLIHERDTYIAWSLKRSKAVNSSKKVVGVIG 120
           +N +KE S+D+S FQLY+            LIHERDTY+AWSLKRSKAVN  K+VVGVIG
Sbjct: 256 TNEMKELSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVVGVIG 315

Query: 119 KGHMNGVIYALVSDSGELRFRDLVGQRSSRNKTGGWLDT 3
           KGHMNGVIYALVSD G LRFRDLVG+RSS +   GW+D+
Sbjct: 316 KGHMNGVIYALVSDQGNLRFRDLVGKRSSGDGANGWVDS 354


>ref|XP_002274961.1| PREDICTED: traB domain-containing protein-like [Vitis vinifera]
          Length = 385

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/99 (65%), Positives = 76/99 (76%)
 Frame = -1

Query: 299 SNTLKESSSDNSNFQLYEXXXXXXXXXXXXLIHERDTYIAWSLKRSKAVNSSKKVVGVIG 120
           +N +KE S+D+S FQLY+            LIHERDTY+AWSLKRSKAVN  K+VVGVIG
Sbjct: 261 TNEMKELSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVVGVIG 320

Query: 119 KGHMNGVIYALVSDSGELRFRDLVGQRSSRNKTGGWLDT 3
           KGHMNGVIYALVSD G LRFRDLVG+RSS +   GW+D+
Sbjct: 321 KGHMNGVIYALVSDQGNLRFRDLVGKRSSGDGANGWVDS 359


>emb|CAN73376.1| hypothetical protein VITISV_019101 [Vitis vinifera]
          Length = 364

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/99 (64%), Positives = 75/99 (75%)
 Frame = -1

Query: 299 SNTLKESSSDNSNFQLYEXXXXXXXXXXXXLIHERDTYIAWSLKRSKAVNSSKKVVGVIG 120
           +N +K  S+D+S FQLY+            LIHERDTY+AWSLKRSKAVN  K+VVGVIG
Sbjct: 240 TNEMKXLSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVVGVIG 299

Query: 119 KGHMNGVIYALVSDSGELRFRDLVGQRSSRNKTGGWLDT 3
           KGHMNGVIYALVSD G LRFRDLVG+RSS +   GW+D+
Sbjct: 300 KGHMNGVIYALVSDQGNLRFRDLVGKRSSGDGANGWVDS 338


>ref|XP_003536482.1| PREDICTED: traB domain-containing protein-like [Glycine max]
          Length = 371

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/96 (65%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
 Frame = -1

Query: 290 LKESSSDNSNFQLYEXXXXXXXXXXXXLIHERDTYIAWSLKRSKAVNSSKKVVGVIGKGH 111
           L+E+SSD+  FQLYE            LIHERDTY+AWSLKRSKAVN+SK VVGVIGKGH
Sbjct: 249 LQEASSDDGTFQLYEQLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNSKNVVGVIGKGH 308

Query: 110 MNGVIYALVSDSGELRFRDLVGQRS-SRNKTGGWLD 6
           MNGVIYAL+SD+G LRFRDLVG+ S     + GW+D
Sbjct: 309 MNGVIYALLSDTGNLRFRDLVGKNSYDGGGSNGWID 344


>ref|XP_002318253.1| predicted protein [Populus trichocarpa] gi|222858926|gb|EEE96473.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/88 (68%), Positives = 67/88 (76%)
 Frame = -1

Query: 296 NTLKESSSDNSNFQLYEXXXXXXXXXXXXLIHERDTYIAWSLKRSKAVNSSKKVVGVIGK 117
           N  K SS+D+  FQLYE            LIHERDTY+AWSLKRSKAVN+ K+VVGVIGK
Sbjct: 123 NNFKASSTDDRTFQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNNGKRVVGVIGK 182

Query: 116 GHMNGVIYALVSDSGELRFRDLVGQRSS 33
           GHMNGVIYAL+SD G LRFRDL G+RSS
Sbjct: 183 GHMNGVIYALISDQGNLRFRDLAGRRSS 210


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